RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 SIP14410 1827 aa11.5□□□□□ -0.57
TOP3A-212ENST00000582122 CCDC169A6NNP5 214 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 ACKR2O00590 384 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 N4BP3O15049 544 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 FAM13AO94988 1023 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 CA3P07451 260 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 MAPTP10636 758 aaKnown RBP11.49□□□□□ -0.57
TOP3A-212ENST00000582122 GAP43P17677 238 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 CMA1P23946 247 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 NPTX2P47972 431 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 RABGGTBP53611 331 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 PEX3P56589 373 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 STRN3Q13033 797 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 PRPF4BQ13523 1007 aaKnown RBP11.49□□□□□ -0.57
TOP3A-212ENST00000582122 BTG3Q14201 252 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-212ENST00000582122 TMEM132AQ24JP5 1023 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 FOXD4L6Q3SYB3 417 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-212ENST00000582122 NAALADL2Q58DX5 795 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 SPECC1Q5M775 1068 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 AXDND1Q5T1B0 1012 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-212ENST00000582122 RESP18Q5W5W9 173 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 FOXD4L3Q6VB84 417 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-212ENST00000582122 CRIPAKQ8N1N5 446 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 FIBCD1Q8N539 461 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 ATXN2LQ8WWM7 1075 aaKnown RBP11.49□□□□□ -0.57
TOP3A-212ENST00000582122 LINC01599Q8WXQ3 324 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 ZNF689Q96CS4 500 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-212ENST00000582122 ZNF668Q96K58 619 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-212ENST00000582122 PLVAPQ9BX97 442 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 TRIM6Q9C030 488 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-212ENST00000582122 TMEM117Q9H0C3 514 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 FAM105AQ9NUU6 356 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 ARHGAP28Q9P2N2 729 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 YBX2Q9Y2T7 364 aaKnown RBP11.49□□□□□ -0.57
TOP3A-212ENST00000582122 ADGRA3Q8IWK6 1321 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 CNTNAP2Q9UHC6 1331 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 ZMYM2Q9UBW7 1377 aa11.49□□□□□ -0.57
TOP3A-212ENST00000582122 A0A1B0GUA9 196 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 A0A1W2PQ27 194 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 A0A1W2PQ64 194 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 A0A1W2PQD8 194 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 GOLGA6L4A6NEF3 574 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 MGEA5O60502 916 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 TSPAN1O60635 241 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 PRKCBP05771 671 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 MYL1P05976 194 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 RB1P06400 928 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 HOXA11P31270 313 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-212ENST00000582122 PBX2P40425 430 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 ZNF131P52739 623 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 ERVK-21P61565 698 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 TAP1Q03518 808 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 MAPK7Q13164 816 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 ALCAMQ13740 583 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 DHX8Q14562 1220 aaKnown RBP11.48□□□□□ -0.57
TOP3A-212ENST00000582122 MCM6Q14566 821 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 GRIN2CQ14957 1233 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 FAM117BQ6P1L5 589 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 SLC27A1Q6PCB7 646 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 GLB1LQ6UWU2 654 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 CEP57L1Q8IYX8 460 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 MRPL4Q9BYD3 311 aaKnown RBP11.48□□□□□ -0.57
TOP3A-212ENST00000582122 MINDY3Q9H8M7 445 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 CHMP5Q9NZZ3 219 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 KANSL3Q9P2N6 904 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 THEGQ9P2T0 379 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 PCDHB2Q9Y5E7 798 aa11.48□□□□□ -0.57
TOP3A-212ENST00000582122 CSDE1O75534 798 aaKnown RBP11.47□□□□□ -0.57
TOP3A-212ENST00000582122 ARF4P18085 180 aaPredicted RBP11.47□□□□□ -0.57
TOP3A-212ENST00000582122 FGFR4P22455 802 aa11.47□□□□□ -0.57
TOP3A-212ENST00000582122 GIT2Q14161 759 aa11.47□□□□□ -0.57
TOP3A-212ENST00000582122 DCAF4L1Q3SXM0 396 aa11.47□□□□□ -0.57
TOP3A-212ENST00000582122 ARSHQ5FYA8 562 aa11.47□□□□□ -0.57
TOP3A-212ENST00000582122 CNNM4Q6P4Q7 775 aa11.47□□□□□ -0.57
TOP3A-212ENST00000582122 SHC4Q6S5L8 630 aa11.47□□□□□ -0.57
TOP3A-212ENST00000582122 STXBP4Q6ZWJ1 553 aa11.47□□□□□ -0.57
TOP3A-212ENST00000582122 USP49Q70CQ1 688 aa11.47□□□□□ -0.57
TOP3A-212ENST00000582122 MRPL10Q7Z7H8 261 aaKnown RBP11.47□□□□□ -0.57
TOP3A-212ENST00000582122 ZNF598Q86UK7 904 aaKnown RBP11.47□□□□□ -0.57
TOP3A-212ENST00000582122 CCDC65Q8IXS2 484 aa11.47□□□□□ -0.57
TOP3A-212ENST00000582122 DAW1Q8N136 415 aa11.47□□□□□ -0.57
TOP3A-212ENST00000582122 LRRC43Q8N309 656 aa11.47□□□□□ -0.57
TOP3A-212ENST00000582122 MYCT1Q8N699 235 aa11.47□□□□□ -0.57
TOP3A-212ENST00000582122 DDX12PQ92771 950 aa11.47□□□□□ -0.57
TOP3A-212ENST00000582122 CLP1Q92989 425 aaKnown RBP11.47□□□□□ -0.57
TOP3A-212ENST00000582122 HVCN1Q96D96 273 aa11.47□□□□□ -0.57
TOP3A-212ENST00000582122 REEP2Q9BRK0 252 aa11.47□□□□□ -0.57
TOP3A-212ENST00000582122 C11orf84Q9BUA3 381 aaPredicted RBP11.47□□□□□ -0.57
TOP3A-212ENST00000582122 CCDC113Q9H0I3 377 aa11.47□□□□□ -0.57
TOP3A-212ENST00000582122 LMCD1Q9NZU5 365 aa11.47□□□□□ -0.57
TOP3A-212ENST00000582122 STK39Q9UEW8 545 aa11.47□□□□□ -0.57
TOP3A-212ENST00000582122 KCNH3Q9ULD8 1083 aa11.47□□□□□ -0.57
TOP3A-212ENST00000582122 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.47□□□□□ -0.57
TOP3A-212ENST00000582122 LINC01553A4QN01 128 aa11.46□□□□□ -0.57
TOP3A-212ENST00000582122 POLR2DO15514 142 aaKnown RBP11.46□□□□□ -0.57
TOP3A-212ENST00000582122 GTPBP6O43824 516 aaPredicted RBP11.46□□□□□ -0.57
TOP3A-212ENST00000582122 TRAK2O60296 914 aa11.46□□□□□ -0.57
TOP3A-212ENST00000582122 LAG3P18627 525 aa11.46□□□□□ -0.57
TOP3A-212ENST00000582122 NCKAP1LP55160 1127 aa11.46□□□□□ -0.57
TOP3A-212ENST00000582122 AMHR2Q16671 573 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms