RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 ERMNQ8TAM6 284 aa24.85■■□□□ 1.57
CASC3-207ENST00000581849 URGCPQ8TCY9 931 aa24.85■■□□□ 1.57
CASC3-207ENST00000581849 UBN1Q9NPG3 1134 aa24.85■■□□□ 1.57
CASC3-207ENST00000581849 KANSL3Q9P2N6 904 aa24.85■■□□□ 1.57
CASC3-207ENST00000581849 DBR1Q9UK59 544 aaKnown RBP24.85■■□□□ 1.57
CASC3-207ENST00000581849 ZC3H11AO75152 810 aaKnown RBP eCLIP24.84■■□□□ 1.57
CASC3-207ENST00000581849 ATP2B1P20020 1258 aa24.84■■□□□ 1.57
CASC3-207ENST00000581849 NOTUMQ6P988 496 aa24.84■■□□□ 1.57
CASC3-207ENST00000581849 AGMOQ6ZNB7 445 aa24.84■■□□□ 1.57
CASC3-207ENST00000581849 CATSPER3Q86XQ3 398 aa24.84■■□□□ 1.57
CASC3-207ENST00000581849 MRPL43Q8N983 215 aaKnown RBP24.84■■□□□ 1.57
CASC3-207ENST00000581849 VN1R2Q8NFZ6 395 aa24.84■■□□□ 1.57
CASC3-207ENST00000581849 NACC1Q96RE7 527 aa24.84■■□□□ 1.57
CASC3-207ENST00000581849 LRFN3Q9BTN0 628 aa24.84■■□□□ 1.57
CASC3-207ENST00000581849 NRDE2Q9H7Z3 1164 aa24.84■■□□□ 1.57
CASC3-207ENST00000581849 RSAD1Q9HA92 442 aa24.84■■□□□ 1.57
CASC3-207ENST00000581849 NOL7Q9UMY1 257 aaKnown RBP24.84■■□□□ 1.57
CASC3-207ENST00000581849 MEIS3P2A8K0S8 358 aa24.83■■□□□ 1.57
CASC3-207ENST00000581849 DCXO43602 365 aa24.83■■□□□ 1.57
CASC3-207ENST00000581849 TSPAN1O60635 241 aa24.83■■□□□ 1.57
CASC3-207ENST00000581849 RPA1P27694 616 aa24.83■■□□□ 1.57
CASC3-207ENST00000581849 RNASELQ05823 741 aaKnown RBP24.83■■□□□ 1.57
CASC3-207ENST00000581849 GNL2Q13823 731 aaKnown RBP24.83■■□□□ 1.57
CASC3-207ENST00000581849 CAPSQ13938 189 aa24.83■■□□□ 1.57
CASC3-207ENST00000581849 GIT2Q14161 759 aa24.83■■□□□ 1.57
CASC3-207ENST00000581849 TTC38Q5R3I4 469 aa24.83■■□□□ 1.57
CASC3-207ENST00000581849 MCPH1Q8NEM0 835 aa24.83■■□□□ 1.57
CASC3-207ENST00000581849 ASAP3Q8TDY4 903 aa24.83■■□□□ 1.57
CASC3-207ENST00000581849 PIGOQ8TEQ8 1089 aa24.83■■□□□ 1.57
CASC3-207ENST00000581849 IGSF21Q96ID5 467 aa24.83■■□□□ 1.57
CASC3-207ENST00000581849 C11orf16Q9NQ32 467 aa24.83■■□□□ 1.57
CASC3-207ENST00000581849 INPP5FQ9Y2H2 1132 aa24.83■■□□□ 1.57
CASC3-207ENST00000581849 IRAK3Q9Y616 596 aa24.83■■□□□ 1.57
CASC3-207ENST00000581849 HIDE1A8MVS5 230 aa24.82■■□□□ 1.56
CASC3-207ENST00000581849 INO80B-WBP1J3KQ70 363 aa24.82■■□□□ 1.56
CASC3-207ENST00000581849 INPPL1O15357 1258 aa24.82■■□□□ 1.56
CASC3-207ENST00000581849 GALTP07902 379 aa24.82■■□□□ 1.56
CASC3-207ENST00000581849 HOXB8P17481 243 aaPredicted RBP24.82■■□□□ 1.56
CASC3-207ENST00000581849 GLRA2P23416 452 aa24.82■■□□□ 1.56
CASC3-207ENST00000581849 U2AF2P26368 475 aaKnown RBP eCLIP24.82■■□□□ 1.566e-7■□□□□ 9.6
CASC3-207ENST00000581849 MBTD1Q05BQ5 628 aa24.82■■□□□ 1.56
CASC3-207ENST00000581849 HAUS3Q68CZ6 603 aa24.82■■□□□ 1.56
CASC3-207ENST00000581849 DDX53Q86TM3 631 aaKnown RBP24.82■■□□□ 1.56
CASC3-207ENST00000581849 SUSD6Q92537 303 aa24.82■■□□□ 1.56
CASC3-207ENST00000581849 TMEM175Q9BSA9 504 aa24.82■■□□□ 1.56
CASC3-207ENST00000581849 KIF3AQ9Y496 699 aa24.82■■□□□ 1.56
CASC3-207ENST00000581849 USP15Q9Y4E8 981 aaPredicted RBP24.82■■□□□ 1.56
CASC3-207ENST00000581849 C2orf71A6NGG8 1288 aa24.81■■□□□ 1.56
CASC3-207ENST00000581849 ST18O60284 1047 aa24.81■■□□□ 1.56
CASC3-207ENST00000581849 MED24O75448 989 aa24.81■■□□□ 1.56
CASC3-207ENST00000581849 TECP42680 631 aa24.81■■□□□ 1.56
CASC3-207ENST00000581849 ZNF174Q15697 407 aa24.81■■□□□ 1.56
CASC3-207ENST00000581849 ANKRD54Q6NXT1 300 aa24.81■■□□□ 1.56
CASC3-207ENST00000581849 CASP10Q92851 521 aa24.81■■□□□ 1.56
CASC3-207ENST00000581849 ZBP1Q9H171 429 aa24.81■■□□□ 1.56
CASC3-207ENST00000581849 CSRNP2Q9H175 543 aa24.81■■□□□ 1.56
CASC3-207ENST00000581849 POLR3FQ9H1D9 316 aaPredicted RBP24.81■■□□□ 1.56
CASC3-207ENST00000581849 DAXXQ9UER7 740 aaPredicted RBP24.81■■□□□ 1.56
CASC3-207ENST00000581849 ZMYM2Q9UBW7 1377 aa24.8■■□□□ 1.56
CASC3-207ENST00000581849 NT5C1B-RDH14C9J2C7 533 aa24.8■■□□□ 1.56
CASC3-207ENST00000581849 USO1O60763 962 aaKnown RBP24.8■■□□□ 1.56
CASC3-207ENST00000581849 CTSAP10619 480 aa24.8■■□□□ 1.56
CASC3-207ENST00000581849 FXR2P51116 673 aaKnown RBP eCLIP24.8■■□□□ 1.56
CASC3-207ENST00000581849 AMHR2Q16671 573 aa24.8■■□□□ 1.56
CASC3-207ENST00000581849 LONRF3Q496Y0 759 aa24.8■■□□□ 1.56
CASC3-207ENST00000581849 HACE1Q8IYU2 909 aa24.8■■□□□ 1.56
CASC3-207ENST00000581849 SMG8Q8ND04 991 aaKnown RBP24.8■■□□□ 1.56
CASC3-207ENST00000581849 ARIH1Q9Y4X5 557 aaPredicted RBP24.8■■□□□ 1.56
CASC3-207ENST00000581849 IPPQ9Y573 584 aa24.8■■□□□ 1.56
CASC3-207ENST00000581849 STK24Q9Y6E0 443 aa24.8■■□□□ 1.56
CASC3-207ENST00000581849 PRR33A8MZF0 331 aa24.79■■□□□ 1.56
CASC3-207ENST00000581849 ITGA4P13612 1032 aa24.79■■□□□ 1.56
CASC3-207ENST00000581849 CBX2Q14781 532 aaPredicted RBP24.79■■□□□ 1.56
CASC3-207ENST00000581849 TMEM173Q86WV6 379 aaPredicted RBP24.79■■□□□ 1.56
CASC3-207ENST00000581849 VPS52Q8N1B4 723 aa24.79■■□□□ 1.56
CASC3-207ENST00000581849 PRIMPOLQ96LW4 560 aa24.79■■□□□ 1.56
CASC3-207ENST00000581849 PHF7Q9BWX1 381 aaPredicted RBP24.79■■□□□ 1.56
CASC3-207ENST00000581849 C5orf42Q9H799 3197 aa24.78■■□□□ 1.56
CASC3-207ENST00000581849 LOC730098B7Z3J9 87 aa24.78■■□□□ 1.56
CASC3-207ENST00000581849 ARF4P18085 180 aaPredicted RBP24.78■■□□□ 1.56
CASC3-207ENST00000581849 SLC11A1P49279 550 aa24.78■■□□□ 1.56
CASC3-207ENST00000581849 RBM10P98175 930 aaKnown RBP24.78■■□□□ 1.56
CASC3-207ENST00000581849 HERC4Q5GLZ8 1057 aaPredicted RBP24.78■■□□□ 1.56
CASC3-207ENST00000581849 CDCA2Q69YH5 1023 aaPredicted RBP24.78■■□□□ 1.56
CASC3-207ENST00000581849 PPP4R3CPQ6ZMV5 832 aa24.78■■□□□ 1.56
CASC3-207ENST00000581849 ZNF280BQ86YH2 543 aa24.78■■□□□ 1.56
CASC3-207ENST00000581849 C4orf32Q8N8J7 132 aa24.78■■□□□ 1.56
CASC3-207ENST00000581849 FAM193BQ96PV7 902 aaPredicted RBP24.78■■□□□ 1.56
CASC3-207ENST00000581849 S1PR5Q9H228 398 aa24.78■■□□□ 1.56
CASC3-207ENST00000581849 DNAJB4Q9UDY4 337 aa24.78■■□□□ 1.56
CASC3-207ENST00000581849 HCFC2Q9Y5Z7 792 aa24.78■■□□□ 1.56
CASC3-207ENST00000581849 LAD1O00515 517 aa24.77■■□□□ 1.56
CASC3-207ENST00000581849 CXCL14O95715 111 aa24.77■■□□□ 1.56
CASC3-207ENST00000581849 ALDH2P05091 517 aa24.77■■□□□ 1.56
CASC3-207ENST00000581849 PDIA5Q14554 519 aa24.77■■□□□ 1.56
CASC3-207ENST00000581849 TPRNQ4KMQ1 711 aa24.77■■□□□ 1.56
CASC3-207ENST00000581849 SYCE2Q6PIF2 218 aa24.77■■□□□ 1.56
CASC3-207ENST00000581849 POTEGQ6S5H5 508 aa24.77■■□□□ 1.56
CASC3-207ENST00000581849 EIF2AQ9BY44 585 aaKnown RBP24.77■■□□□ 1.56
CASC3-207ENST00000581849 RAB34Q9BZG1 259 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms