RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 NDC1Q9BTX1 674 aa5.33□□□□□ -1.56
SMCHD1-206ENST00000581631 SERHL2Q9H4I8 314 aa5.33□□□□□ -1.56
SMCHD1-206ENST00000581631 B4GALT6Q9UBX8 382 aa5.33□□□□□ -1.56
SMCHD1-206ENST00000581631 B4E1Z4 1266 aa5.32□□□□□ -1.56
SMCHD1-206ENST00000581631 H7C1D1 291 aa5.32□□□□□ -1.56
SMCHD1-206ENST00000581631 KIAA0355O15063 1070 aa5.32□□□□□ -1.56
SMCHD1-206ENST00000581631 ZNF185O15231 689 aa5.32□□□□□ -1.56
SMCHD1-206ENST00000581631 DNAJC8O75937 253 aaPredicted RBP5.32□□□□□ -1.56
SMCHD1-206ENST00000581631 FSBPO95073 299 aa5.32□□□□□ -1.56
SMCHD1-206ENST00000581631 APOBEC3AP31941 199 aaPredicted RBP5.32□□□□□ -1.56
SMCHD1-206ENST00000581631 ADCY1Q08828 1119 aa5.32□□□□□ -1.56
SMCHD1-206ENST00000581631 MRPL49Q13405 166 aaKnown RBP5.32□□□□□ -1.56
SMCHD1-206ENST00000581631 IQSEC1Q6DN90 963 aa5.32□□□□□ -1.56
SMCHD1-206ENST00000581631 PHYKPLQ8IUZ5 450 aa5.32□□□□□ -1.56
SMCHD1-206ENST00000581631 LINC00476Q8WZB0 136 aa5.32□□□□□ -1.56
SMCHD1-206ENST00000581631 UIMC1Q96RL1 719 aa5.32□□□□□ -1.56
SMCHD1-206ENST00000581631 MYL10Q9BUA6 226 aa5.32□□□□□ -1.56
SMCHD1-206ENST00000581631 ADARB2Q9NS39 739 aaKnown RBP5.32□□□□□ -1.56
SMCHD1-206ENST00000581631 SETD1BQ9UPS6 1966 aaKnown RBP5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 E9PSI1 815 aa5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 CBX4O00257 560 aa5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 NRP1O14786 923 aa5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 DNAJC6O75061 913 aa5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 ALDH1A2O94788 518 aa5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 RAPGEF3O95398 923 aa5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 ASLP04424 464 aa5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 SLC9A1P19634 815 aa5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 ATP2B1P20020 1258 aa5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 WNT3AP56704 352 aa5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 ZNF460Q14592 562 aa5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 MAN2A1Q16706 1144 aa5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 STRIP1Q5VSL9 837 aa5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 CCDC62Q6P9F0 684 aa5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 GLCCI1Q86VQ1 547 aa5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 FAM98AQ8NCA5 519 aaKnown RBP5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 GLB1L3Q8NCI6 653 aaPredicted RBP5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 MKL1Q969V6 931 aa5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 ARMC5Q96C12 935 aa5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 CPPED1Q9BRF8 314 aaPredicted RBP5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 HIRIP3Q9BW71 556 aaPredicted RBP5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 WDR11Q9BZH6 1224 aa5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 TANGO6Q9C0B7 1094 aa5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 ZMAT4Q9H898 229 aa5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 ANKFY1Q9P2R3 1169 aa5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 SYNPO2Q9UMS6 1093 aa5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 SPO11Q9Y5K1 396 aa5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 TNPO3Q9Y5L0 923 aaKnown RBP5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 EPN1Q9Y6I3 576 aaPredicted RBP5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 ARHGEF17Q96PE2 2063 aaPredicted RBP5.31□□□□□ -1.56
SMCHD1-206ENST00000581631 SEC24DO94855 1032 aaPredicted RBP5.3□□□□□ -1.56
SMCHD1-206ENST00000581631 CD38P28907 300 aa5.3□□□□□ -1.56
SMCHD1-206ENST00000581631 ZNF174Q15697 407 aa5.3□□□□□ -1.56
SMCHD1-206ENST00000581631 BEAN1Q3B7T3 259 aa5.3□□□□□ -1.56
SMCHD1-206ENST00000581631 FNDC3BQ53EP0 1204 aaKnown RBP5.3□□□□□ -1.56
SMCHD1-206ENST00000581631 BTNL9Q6UXG8 535 aa5.3□□□□□ -1.56
SMCHD1-206ENST00000581631 FAM83AQ86UY5 434 aa5.3□□□□□ -1.56
SMCHD1-206ENST00000581631 LILRB2Q8N423 598 aa5.3□□□□□ -1.56
SMCHD1-206ENST00000581631 C7orf31Q8N865 590 aa5.3□□□□□ -1.56
SMCHD1-206ENST00000581631 NOL10Q9BSC4 688 aaKnown RBP5.3□□□□□ -1.56
SMCHD1-206ENST00000581631 POFUT1Q9H488 388 aa5.3□□□□□ -1.56
SMCHD1-206ENST00000581631 CYP4F11Q9HBI6 524 aa5.3□□□□□ -1.56
SMCHD1-206ENST00000581631 EIF2B4Q9UI10 523 aaKnown RBP5.3□□□□□ -1.56
SMCHD1-206ENST00000581631 LEFTY2O00292 366 aa5.29□□□□□ -1.56
SMCHD1-206ENST00000581631 ELL2O00472 640 aaPredicted RBP5.29□□□□□ -1.56
SMCHD1-206ENST00000581631 NCR1O76036 304 aa5.29□□□□□ -1.56
SMCHD1-206ENST00000581631 ZSCAN20P17040 1043 aaPredicted RBP5.29□□□□□ -1.56
SMCHD1-206ENST00000581631 CASRP41180 1078 aa5.29□□□□□ -1.56
SMCHD1-206ENST00000581631 CD69Q07108 199 aa5.29□□□□□ -1.56
SMCHD1-206ENST00000581631 FOXI1Q12951 378 aa5.29□□□□□ -1.56
SMCHD1-206ENST00000581631 PRR16Q569H4 304 aa5.29□□□□□ -1.56
SMCHD1-206ENST00000581631 GDF7Q7Z4P5 450 aa5.29□□□□□ -1.56
SMCHD1-206ENST00000581631 SYT12Q8IV01 421 aa5.29□□□□□ -1.56
SMCHD1-206ENST00000581631 RTF1Q92541 710 aaKnown RBP5.29□□□□□ -1.56
SMCHD1-206ENST00000581631 HIST1H2AHQ96KK5 128 aa5.29□□□□□ -1.56
SMCHD1-206ENST00000581631 COQ10AQ96MF6 247 aa5.29□□□□□ -1.56
SMCHD1-206ENST00000581631 HIST1H2AJQ99878 128 aa5.29□□□□□ -1.56
SMCHD1-206ENST00000581631 FDXACB1Q9BRP7 624 aaPredicted RBP5.29□□□□□ -1.56
SMCHD1-206ENST00000581631 CABP5Q9NP86 173 aa5.29□□□□□ -1.56
SMCHD1-206ENST00000581631 AKIP1Q9NQ31 210 aa5.29□□□□□ -1.56
SMCHD1-206ENST00000581631 GAGE12BA1L429 117 aa5.28□□□□□ -1.56
SMCHD1-206ENST00000581631 GAGE12HA6NDE8 117 aa5.28□□□□□ -1.56
SMCHD1-206ENST00000581631 LY86O95711 162 aa5.28□□□□□ -1.56
SMCHD1-206ENST00000581631 BMPR1AP36894 532 aa5.28□□□□□ -1.56
SMCHD1-206ENST00000581631 RD3Q7Z3Z2 195 aa5.28□□□□□ -1.56
SMCHD1-206ENST00000581631 MSL3Q8N5Y2 521 aaKnown RBP5.28□□□□□ -1.56
SMCHD1-206ENST00000581631 IL17RAQ96F46 866 aa5.28□□□□□ -1.56
SMCHD1-206ENST00000581631 DCLRE1CQ96SD1 692 aaKnown RBP5.28□□□□□ -1.56
SMCHD1-206ENST00000581631 ADAM2Q99965 735 aa5.28□□□□□ -1.56
SMCHD1-206ENST00000581631 ORAI3Q9BRQ5 295 aa5.28□□□□□ -1.56
SMCHD1-206ENST00000581631 MYPNQ86TC9 1320 aa5.27□□□□□ -1.57
SMCHD1-206ENST00000581631 MARCH11A6NNE9 402 aa5.27□□□□□ -1.57
SMCHD1-206ENST00000581631 RNASET2O00584 256 aaKnown RBP5.27□□□□□ -1.57
SMCHD1-206ENST00000581631 MAFGO15525 162 aa5.27□□□□□ -1.57
SMCHD1-206ENST00000581631 SEC24CP53992 1094 aa5.27□□□□□ -1.57
SMCHD1-206ENST00000581631 ZBTB41Q5SVQ8 909 aa5.27□□□□□ -1.57
SMCHD1-206ENST00000581631 PIK3R6Q5UE93 754 aa5.27□□□□□ -1.57
SMCHD1-206ENST00000581631 TIGD7Q6NT04 549 aaPredicted RBP5.27□□□□□ -1.57
SMCHD1-206ENST00000581631 TAS1R1Q7RTX1 841 aa5.27□□□□□ -1.57
SMCHD1-206ENST00000581631 SRPK1Q96SB4 655 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms