RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 C8orf76Q96K31 380 aa23.28■■□□□ 1.32
CCDC42-203ENST00000581598 NFKBIZQ9BYH8 718 aa23.28■■□□□ 1.32
CCDC42-203ENST00000581598 TMEM60Q9H2L4 133 aa23.28■■□□□ 1.32
CCDC42-203ENST00000581598 FOXP1Q9H334 677 aaPredicted RBP23.28■■□□□ 1.32
CCDC42-203ENST00000581598 SH2B1Q9NRF2 756 aaPredicted RBP23.28■■□□□ 1.32
CCDC42-203ENST00000581598 FAM86C2PA6NEL3 165 aa23.27■■□□□ 1.32
CCDC42-203ENST00000581598 C2orf71A6NGG8 1288 aa23.27■■□□□ 1.32
CCDC42-203ENST00000581598 LOC730098B7Z3J9 87 aa23.27■■□□□ 1.32
CCDC42-203ENST00000581598 NT5C1B-RDH14C9J2C7 533 aa23.27■■□□□ 1.32
CCDC42-203ENST00000581598 ZC3H11AO75152 810 aaKnown RBP eCLIP23.27■■□□□ 1.32
CCDC42-203ENST00000581598 GALTP07902 379 aa23.27■■□□□ 1.32
CCDC42-203ENST00000581598 HOXB8P17481 243 aaPredicted RBP23.27■■□□□ 1.32
CCDC42-203ENST00000581598 NCLP19338 710 aaKnown RBP23.27■■□□□ 1.32
CCDC42-203ENST00000581598 ARL2P36404 184 aa23.27■■□□□ 1.32
CCDC42-203ENST00000581598 CBX2Q14781 532 aaPredicted RBP23.27■■□□□ 1.32
CCDC42-203ENST00000581598 HERC4Q5GLZ8 1057 aaPredicted RBP23.27■■□□□ 1.32
CCDC42-203ENST00000581598 ANKRD54Q6NXT1 300 aa23.27■■□□□ 1.32
CCDC42-203ENST00000581598 DDX53Q86TM3 631 aaKnown RBP23.27■■□□□ 1.32
CCDC42-203ENST00000581598 IGSF21Q96ID5 467 aa23.27■■□□□ 1.32
CCDC42-203ENST00000581598 PHF7Q9BWX1 381 aaPredicted RBP23.27■■□□□ 1.32
CCDC42-203ENST00000581598 TUFT1Q9NNX1 390 aa23.27■■□□□ 1.32
CCDC42-203ENST00000581598 KANSL3Q9P2N6 904 aa23.27■■□□□ 1.32
CCDC42-203ENST00000581598 HCN4Q9Y3Q4 1203 aa23.27■■□□□ 1.32
CCDC42-203ENST00000581598 IRAK3Q9Y616 596 aa23.27■■□□□ 1.32
CCDC42-203ENST00000581598 POTEMA6NI47 508 aa23.26■■□□□ 1.31
CCDC42-203ENST00000581598 ST18O60284 1047 aa23.26■■□□□ 1.31
CCDC42-203ENST00000581598 ERLIN2O94905 339 aa23.26■■□□□ 1.31
CCDC42-203ENST00000581598 SPATA31C1P0DKV0 1188 aa23.26■■□□□ 1.31
CCDC42-203ENST00000581598 RNASELQ05823 741 aaKnown RBP23.26■■□□□ 1.31
CCDC42-203ENST00000581598 GIT2Q14161 759 aa23.26■■□□□ 1.31
CCDC42-203ENST00000581598 LONRF3Q496Y0 759 aa23.26■■□□□ 1.31
CCDC42-203ENST00000581598 RNF135Q8IUD6 432 aa23.26■■□□□ 1.31
CCDC42-203ENST00000581598 FBXO18Q8NFZ0 1043 aa23.26■■□□□ 1.31
CCDC42-203ENST00000581598 URGCPQ8TCY9 931 aa23.26■■□□□ 1.31
CCDC42-203ENST00000581598 CASP10Q92851 521 aa23.26■■□□□ 1.31
CCDC42-203ENST00000581598 ZBP1Q9H171 429 aa23.26■■□□□ 1.31
CCDC42-203ENST00000581598 S1PR5Q9H228 398 aa23.26■■□□□ 1.31
CCDC42-203ENST00000581598 RSAD1Q9HA92 442 aa23.26■■□□□ 1.31
CCDC42-203ENST00000581598 UBN1Q9NPG3 1134 aa23.26■■□□□ 1.31
CCDC42-203ENST00000581598 STK39Q9UEW8 545 aa23.26■■□□□ 1.31
CCDC42-203ENST00000581598 INPP5FQ9Y2H2 1132 aa23.26■■□□□ 1.31
CCDC42-203ENST00000581598 INPPL1O15357 1258 aa23.25■■□□□ 1.31
CCDC42-203ENST00000581598 TSPAN1O60635 241 aa23.25■■□□□ 1.31
CCDC42-203ENST00000581598 MCM7P33993 719 aa23.25■■□□□ 1.31
CCDC42-203ENST00000581598 TECP42680 631 aa23.25■■□□□ 1.31
CCDC42-203ENST00000581598 GUCY1B3Q02153 619 aa23.25■■□□□ 1.31
CCDC42-203ENST00000581598 CAPSQ13938 189 aa23.25■■□□□ 1.31
CCDC42-203ENST00000581598 SYCE2Q6PIF2 218 aa23.25■■□□□ 1.31
CCDC42-203ENST00000581598 TMEM173Q86WV6 379 aaPredicted RBP23.25■■□□□ 1.31
CCDC42-203ENST00000581598 ASAP3Q8TDY4 903 aa23.25■■□□□ 1.31
CCDC42-203ENST00000581598 SNX21Q969T3 373 aa23.25■■□□□ 1.31
CCDC42-203ENST00000581598 CCDC43Q96MW1 224 aaKnown RBP23.25■■□□□ 1.31
CCDC42-203ENST00000581598 TMEM175Q9BSA9 504 aa23.25■■□□□ 1.31
CCDC42-203ENST00000581598 POLR3CQ9BUI4 534 aaPredicted RBP23.25■■□□□ 1.31
CCDC42-203ENST00000581598 DBR1Q9UK59 544 aaKnown RBP23.25■■□□□ 1.31
CCDC42-203ENST00000581598 CTSAP10619 480 aa23.24■■□□□ 1.31
CCDC42-203ENST00000581598 GLRA2P23416 452 aa23.24■■□□□ 1.31
CCDC42-203ENST00000581598 HOXD11P31277 338 aaPredicted RBP23.24■■□□□ 1.31
CCDC42-203ENST00000581598 MBTD1Q05BQ5 628 aa23.24■■□□□ 1.31
CCDC42-203ENST00000581598 NCBP1Q09161 790 aaKnown RBP23.24■■□□□ 1.31
CCDC42-203ENST00000581598 NOTUMQ6P988 496 aa23.24■■□□□ 1.31
CCDC42-203ENST00000581598 VPS52Q8N1B4 723 aa23.24■■□□□ 1.31
CCDC42-203ENST00000581598 SMG8Q8ND04 991 aaKnown RBP23.24■■□□□ 1.31
CCDC42-203ENST00000581598 PIGOQ8TEQ8 1089 aa23.24■■□□□ 1.31
CCDC42-203ENST00000581598 DNAJB4Q9UDY4 337 aa23.24■■□□□ 1.31
CCDC42-203ENST00000581598 CLASP2O75122 1294 aaKnown RBP23.23■■□□□ 1.31
CCDC42-203ENST00000581598 CD2BP2O95400 341 aaKnown RBP23.23■■□□□ 1.31
CCDC42-203ENST00000581598 ATP2B1P20020 1258 aa23.23■■□□□ 1.31
CCDC42-203ENST00000581598 TRAPPC10P48553 1259 aa23.23■■□□□ 1.31
CCDC42-203ENST00000581598 SLC11A1P49279 550 aa23.23■■□□□ 1.31
CCDC42-203ENST00000581598 AMHR2Q16671 573 aa23.23■■□□□ 1.31
CCDC42-203ENST00000581598 CATSPER3Q86XQ3 398 aa23.23■■□□□ 1.31
CCDC42-203ENST00000581598 ZNF280BQ86YH2 543 aa23.23■■□□□ 1.31
CCDC42-203ENST00000581598 CSRNP2Q9H175 543 aa23.23■■□□□ 1.31
CCDC42-203ENST00000581598 HCFC2Q9Y5Z7 792 aa23.23■■□□□ 1.31
CCDC42-203ENST00000581598 C5orf42Q9H799 3197 aa23.23■■□□□ 1.31
CCDC42-203ENST00000581598 INO80B-WBP1J3KQ70 363 aa23.22■■□□□ 1.31
CCDC42-203ENST00000581598 B4GALT3O60512 393 aa23.22■■□□□ 1.31
CCDC42-203ENST00000581598 CXCL14O95715 111 aa23.22■■□□□ 1.31
CCDC42-203ENST00000581598 OR52Z1P0C646 297 aa23.22■■□□□ 1.31
CCDC42-203ENST00000581598 MUTP22033 750 aa23.22■■□□□ 1.31
CCDC42-203ENST00000581598 RPA1P27694 616 aa23.22■■□□□ 1.31
CCDC42-203ENST00000581598 TPRNQ4KMQ1 711 aa23.22■■□□□ 1.31
CCDC42-203ENST00000581598 NOSTRINQ8IVI9 506 aa23.22■■□□□ 1.31
CCDC42-203ENST00000581598 FAM184AQ8NB25 1140 aa23.22■■□□□ 1.31
CCDC42-203ENST00000581598 MCPH1Q8NEM0 835 aa23.22■■□□□ 1.31
CCDC42-203ENST00000581598 ERMNQ8TAM6 284 aa23.22■■□□□ 1.31
CCDC42-203ENST00000581598 BCL7CQ8WUZ0 217 aaPredicted RBP23.22■■□□□ 1.31
CCDC42-203ENST00000581598 NACC1Q96RE7 527 aa23.22■■□□□ 1.31
CCDC42-203ENST00000581598 POLR3FQ9H1D9 316 aaPredicted RBP23.22■■□□□ 1.31
CCDC42-203ENST00000581598 MUTYHQ9UIF7 546 aa23.22■■□□□ 1.31
CCDC42-203ENST00000581598 IPPQ9Y573 584 aa23.22■■□□□ 1.31
CCDC42-203ENST00000581598 MED24O75448 989 aa23.21■■□□□ 1.31
CCDC42-203ENST00000581598 DDHD2O94830 711 aa23.21■■□□□ 1.31
CCDC42-203ENST00000581598 ALDH2P05091 517 aa23.21■■□□□ 1.31
CCDC42-203ENST00000581598 ITGA4P13612 1032 aa23.21■■□□□ 1.31
CCDC42-203ENST00000581598 MCM2P49736 904 aa23.21■■□□□ 1.31
CCDC42-203ENST00000581598 ZNF174Q15697 407 aa23.21■■□□□ 1.31
CCDC42-203ENST00000581598 LLGL2Q6P1M3 1020 aa23.21■■□□□ 1.31
CCDC42-203ENST00000581598 FAM193BQ96PV7 902 aaPredicted RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms