RNA–Protein interactions for RNA: ENST00000581224.5

TRIM16-222, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 815 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-222	ENST00000581224	POLR3F	Q9H1D9	316 aa	Predicted RBP	10.81	□□□□□ -0.68
TRIM16-222	ENST00000581224	HSPBP1	Q9NZL4	362 aa		10.81	□□□□□ -0.68
TRIM16-222	ENST00000581224	ARHGAP28	Q9P2N2	729 aa		10.81	□□□□□ -0.68
TRIM16-222	ENST00000581224	USP20	Q9Y2K6	914 aa		10.81	□□□□□ -0.68
TRIM16-222	ENST00000581224	CASP8AP2	Q9UKL3	1982 aa		10.81	□□□□□ -0.68
TRIM16-222	ENST00000581224	ZNF233	A6NK53	670 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	LRRC53	A6NM62	1247 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	HNRNPDL	O14979	420 aa	Known RBP	10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	SLU7	O95391	586 aa	Known RBP	10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	CYP2C8	P10632	490 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	UCHL3	P15374	230 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	TMOD1	P28289	359 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	PRKCI	P41743	596 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	TM4SF4	P48230	202 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	CASP4	P49662	377 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	LIG4	P49917	911 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	VAV2	P52735	878 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	AP3M2	P53677	418 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	MYL7	Q01449	175 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	KCNA1	Q09470	495 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	KLHL30	Q0D2K2	578 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	GRB14	Q14449	540 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	LY6K	Q17RY6	165 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	TDRD12	Q587J7	1177 aa	Known RBP	10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	CCDC122	Q5T0U0	273 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	ZPBP2	Q6X784	338 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	ARMCX2	Q7L311	632 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	ENOSF1	Q7L5Y1	443 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	IFNL1	Q8IU54	200 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	ZNF710	Q8N1W2	664 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	GPD1L	Q8N335	351 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	PSPC1	Q8WXF1	523 aa	Known RBP	10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	POMGNT1	Q8WZA1	660 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	ERO1A	Q96HE7	468 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	FBXL18	Q96ME1	805 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	STK33	Q9BYT3	514 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	L2HGDH	Q9H9P8	463 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	SAGE1	Q9NXZ1	904 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	GCNT4	Q9P109	453 aa		10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	ZNF215	Q9UL58	517 aa	Predicted RBP	10.8	□□□□□ -0.68
TRIM16-222	ENST00000581224	RBAK-RBAKDN	I3L0D1	243 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	RNF225	M0QZC1	329 aa	Predicted RBP	10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	IGF2BP3	O00425	579 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	RIOK3	O14730	519 aa	Known RBP	10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	EXTL3	O43909	919 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	ZC3H11A	O75152	810 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	TACC1	O75410	805 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	ALDH1A1	P00352	501 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	MAGEA1	P43355	309 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	KIF11	P52732	1056 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	RAPGEF1	Q13905	1077 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	SNRNP35	Q16560	246 aa	Known RBP	10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	KYAT1	Q16773	422 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	GPR142	Q7Z601	462 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	TRIM58	Q8NG06	486 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	PPTC7	Q8NI37	304 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	JAKMIP2	Q96AA8	810 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	FGD4	Q96M96	766 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	MFSD14A	Q96MC6	490 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	ALS2CR12	Q96Q35	445 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	DESI2	Q9BSY9	194 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	IFIH1	Q9BYX4	1025 aa	Known RBP	10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	GAN	Q9H2C0	597 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	EFCC1	Q9HA90	598 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	POLD4	Q9HCU8	107 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	NLRC4	Q9NPP4	1024 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	LZTFL1	Q9NQ48	299 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	XPNPEP1	Q9NQW7	623 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	APEX2	Q9UBZ4	518 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	INTU	Q9ULD6	942 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	STYXL1	Q9Y6J8	313 aa		10.79	□□□□□ -0.68
TRIM16-222	ENST00000581224	MCM3AP	O60318	1980 aa		10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	ANO9	A1A5B4	782 aa		10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	LRRIQ4	A6NIV6	560 aa		10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	PJA2	O43164	708 aa		10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	CTIF	O43310	598 aa	Known RBP	10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	ADCY3	O60266	1144 aa		10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	URI1	O94763	535 aa	Predicted RBP	10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	NOL4	O94818	638 aa		10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	ATP4A	P20648	1035 aa		10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	EIF4A3	P38919	411 aa	Known RBP	10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	KLK7	P49862	253 aa		10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	MXI1	P50539	228 aa		10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	POU5F1	Q01860	360 aa	Known RBP	10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	BMS1	Q14692	1282 aa	Known RBP	10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	MTF1	Q14872	753 aa		10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	TAF1C	Q15572	869 aa	Predicted RBP	10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	SLC18A3	Q16572	532 aa		10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	ZNF569	Q5MCW4	686 aa		10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	KRT39	Q6A163	491 aa		10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	EEPD1	Q7L9B9	569 aa		10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	CEP112	Q8N8E3	955 aa		10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	MNS1	Q8NEH6	495 aa		10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	LMBR1	Q8WVP7	490 aa		10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	NAPG	Q99747	312 aa	Predicted RBP	10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	TINF2	Q9BSI4	451 aa		10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	CRACR2A	Q9BSW2	395 aa		10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	MRPL4	Q9BYD3	311 aa	Known RBP	10.78	□□□□□ -0.68
TRIM16-222	ENST00000581224	NFKBIZ	Q9BYH8	718 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms