RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 PPP4R3CPQ6ZMV5 832 aa6.73□□□□□ -1.33
RNU4ATAC-201ENST00000580972 STXBP4Q6ZWJ1 553 aa6.73□□□□□ -1.33
RNU4ATAC-201ENST00000580972 HS2ST1Q7LGA3 356 aa6.73□□□□□ -1.33
RNU4ATAC-201ENST00000580972 FAM114A1Q8IWE2 563 aa6.73□□□□□ -1.33
RNU4ATAC-201ENST00000580972 TMEM192Q8IY95 271 aa6.73□□□□□ -1.33
RNU4ATAC-201ENST00000580972 REM2Q8IYK8 340 aaPredicted RBP6.73□□□□□ -1.33
RNU4ATAC-201ENST00000580972 TC2NQ8N9U0 490 aa6.73□□□□□ -1.33
RNU4ATAC-201ENST00000580972 ANKRD20A12PQ8NF67 263 aa6.73□□□□□ -1.33
RNU4ATAC-201ENST00000580972 SLC35C1Q96A29 364 aa6.73□□□□□ -1.33
RNU4ATAC-201ENST00000580972 ERO1AQ96HE7 468 aa6.73□□□□□ -1.33
RNU4ATAC-201ENST00000580972 CPB2Q96IY4 423 aa6.73□□□□□ -1.33
RNU4ATAC-201ENST00000580972 CTAGE1Q96RT6 745 aa6.73□□□□□ -1.33
RNU4ATAC-201ENST00000580972 POP1Q99575 1024 aaKnown RBP6.73□□□□□ -1.33
RNU4ATAC-201ENST00000580972 FAM213AQ9BRX8 229 aa6.73□□□□□ -1.33
RNU4ATAC-201ENST00000580972 NTPCRQ9BSD7 190 aaKnown RBP6.73□□□□□ -1.33
RNU4ATAC-201ENST00000580972 ADAMTS10Q9H324 1103 aa6.73□□□□□ -1.33
RNU4ATAC-201ENST00000580972 FAM207AQ9NSI2 230 aaPredicted RBP6.73□□□□□ -1.33
RNU4ATAC-201ENST00000580972 ARMCX3Q9UH62 379 aaPredicted RBP6.73□□□□□ -1.33
RNU4ATAC-201ENST00000580972 DDX20Q9UHI6 824 aaKnown RBP6.73□□□□□ -1.33
RNU4ATAC-201ENST00000580972 GINS2Q9Y248 185 aa6.73□□□□□ -1.33
RNU4ATAC-201ENST00000580972 ZNF236Q9UL36 1845 aa6.73□□□□□ -1.33
RNU4ATAC-201ENST00000580972 PTPRJQ12913 1337 aa6.73□□□□□ -1.33
RNU4ATAC-201ENST00000580972 A0A0U1RQJ8 604 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 TTC26A0AVF1 554 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 FAM170AA1A519 330 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 MBLAC1A4D2B0 266 aaPredicted RBP6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 USP27XA6NNY8 438 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 LRRIQ3A6PVS8 624 aaPredicted RBP6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 INO80B-WBP1J3KQ70 363 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 MEFVO15553 781 aaPredicted RBP6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 MSCO60682 206 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 MFAP3LO75121 409 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 GPR32O75388 356 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 NOL4O94818 638 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 FGFR1OPO95684 399 aaKnown RBP6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 CTSHP09668 335 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 PNMA6AP0CW24 399 aaPredicted RBP6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 CYP2C9P11712 490 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 SLC9A1P19634 815 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 PSMC2P35998 433 aaKnown RBP6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 TNFSF9P41273 254 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 GCLMP48507 274 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 ACOT2P49753 483 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 LIG4P49917 911 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 CPT1AP50416 773 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 GPC3P51654 580 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 MARSP56192 900 aaKnown RBP6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 PTENP60484 403 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 ADAM17P78536 824 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 KCNH2Q12809 1159 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 MTF1Q14872 753 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 MTFR1Q15390 333 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 NFIL3Q16649 462 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 FAM47CQ5HY64 1035 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 GDF6Q6KF10 455 aaPredicted RBP6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 CRELD2Q6UXH1 353 aaPredicted RBP6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 FRMD5Q7Z6J6 570 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 TMEM139Q8IV31 216 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 SLC9A9Q8IVB4 645 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 LRRC8AQ8IWT6 810 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 CEP120Q8N960 986 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 XXYLT1Q8NBI6 393 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 KLHDC9Q8NEP7 349 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 TMEM40Q8WWA1 233 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 DNAJB3Q8WWF6 145 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 TCP11Q8WWU5 503 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 NLRP7Q8WX94 980 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 ATRIPQ8WXE1 791 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 POMGNT1Q8WZA1 660 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 CCDC127Q96BQ5 260 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 HVCN1Q96D96 273 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 TRIM44Q96DX7 344 aaPredicted RBP6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 PCMTD1Q96MG8 357 aaPredicted RBP6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 SCLT1Q96NL6 688 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 OSMRQ99650 979 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 MTG1Q9BT17 334 aaPredicted RBP6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 INO80BQ9C086 356 aaPredicted RBP6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 TTYH3Q9C0H2 523 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 UNC93B1Q9H1C4 597 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 GANQ9H2C0 597 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 TMEM206Q9H813 350 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 C17orf75Q9HAS0 396 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 IFT122Q9HBG6 1241 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 SIX2Q9NPC8 291 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 AGPAT5Q9NUQ2 364 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 RNF19AQ9NV58 838 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 WBP1LQ9NX94 342 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 SAGE1Q9NXZ1 904 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 Q9Y3F1 56 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 PHLPP2Q6ZVD8 1323 aa6.72□□□□□ -1.33
RNU4ATAC-201ENST00000580972 COL1A2P08123 1366 aa6.71□□□□□ -1.33
RNU4ATAC-201ENST00000580972 A0A1W2PQC6 194 aa6.71□□□□□ -1.34
RNU4ATAC-201ENST00000580972 C17orf102A2RUQ5 167 aa6.71□□□□□ -1.34
RNU4ATAC-201ENST00000580972 SOWAHDA6NJG2 315 aa6.71□□□□□ -1.34
RNU4ATAC-201ENST00000580972 AKR1B15C9JRZ8 316 aaPredicted RBP6.71□□□□□ -1.34
RNU4ATAC-201ENST00000580972 K7ERI5 159 aa6.71□□□□□ -1.34
RNU4ATAC-201ENST00000580972 MAGEB2O15479 319 aa6.71□□□□□ -1.34
RNU4ATAC-201ENST00000580972 FAM189A1O60320 539 aa6.71□□□□□ -1.34
RNU4ATAC-201ENST00000580972 TSPAN1O60635 241 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms