RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 C9IYK1 514 aa10.93□□□□□ -0.66
GGA3-209ENST00000580646 C5orf67F2Z3F1 127 aa10.93□□□□□ -0.66
GGA3-209ENST00000580646 DARSP14868 501 aaKnown RBP10.93□□□□□ -0.66
GGA3-209ENST00000580646 SCP2P22307 547 aa10.93□□□□□ -0.66
GGA3-209ENST00000580646 GATMP50440 423 aa10.93□□□□□ -0.66
GGA3-209ENST00000580646 FAM189BP81408 668 aa10.93□□□□□ -0.66
GGA3-209ENST00000580646 LAMTOR4Q0VGL1 99 aa10.93□□□□□ -0.66
GGA3-209ENST00000580646 DSC3Q14574 896 aa10.93□□□□□ -0.66
GGA3-209ENST00000580646 PAN2Q504Q3 1202 aaKnown RBP10.93□□□□□ -0.66
GGA3-209ENST00000580646 CNNM4Q6P4Q7 775 aa10.93□□□□□ -0.66
GGA3-209ENST00000580646 SV2BQ7L1I2 683 aa10.93□□□□□ -0.66
GGA3-209ENST00000580646 SRGAP1Q7Z6B7 1085 aa10.93□□□□□ -0.66
GGA3-209ENST00000580646 RHPN2Q8IUC4 686 aa10.93□□□□□ -0.66
GGA3-209ENST00000580646 PRPF31Q8WWY3 499 aaKnown RBP10.93□□□□□ -0.66
GGA3-209ENST00000580646 MRPS27Q92552 414 aaKnown RBP10.93□□□□□ -0.66
GGA3-209ENST00000580646 TMEM143Q96AN5 459 aa10.93□□□□□ -0.66
GGA3-209ENST00000580646 SCLT1Q96NL6 688 aa10.93□□□□□ -0.66
GGA3-209ENST00000580646 PLIN2Q99541 437 aa10.93□□□□□ -0.66
GGA3-209ENST00000580646 C11orf84Q9BUA3 381 aaPredicted RBP10.93□□□□□ -0.66
GGA3-209ENST00000580646 RUSC1Q9BVN2 902 aa10.93□□□□□ -0.66
GGA3-209ENST00000580646 GCOM2Q9BZD3 368 aaPredicted RBP10.93□□□□□ -0.66
GGA3-209ENST00000580646 KBTBD4Q9NVX7 518 aa10.93□□□□□ -0.66
GGA3-209ENST00000580646 KCNH3Q9ULD8 1083 aa10.93□□□□□ -0.66
GGA3-209ENST00000580646 MRPL42Q9Y6G3 142 aaKnown RBP10.93□□□□□ -0.66
GGA3-209ENST00000580646 TNFRSF10AO00220 468 aa10.92□□□□□ -0.66
GGA3-209ENST00000580646 POLR2DO15514 142 aaKnown RBP10.92□□□□□ -0.66
GGA3-209ENST00000580646 MYL1P05976 194 aa10.92□□□□□ -0.66
GGA3-209ENST00000580646 BMP1P13497 986 aa10.92□□□□□ -0.66
GGA3-209ENST00000580646 PFKFB1P16118 471 aa10.92□□□□□ -0.66
GGA3-209ENST00000580646 ZSCAN20P17040 1043 aaPredicted RBP10.92□□□□□ -0.66
GGA3-209ENST00000580646 GLRA2P23416 452 aa10.92□□□□□ -0.66
GGA3-209ENST00000580646 NAMPTP43490 491 aa10.92□□□□□ -0.66
GGA3-209ENST00000580646 ZNF131P52739 623 aa10.92□□□□□ -0.66
GGA3-209ENST00000580646 PTENP60484 403 aa10.92□□□□□ -0.66
GGA3-209ENST00000580646 AMPD3Q01432 767 aa10.92□□□□□ -0.66
GGA3-209ENST00000580646 MAPK7Q13164 816 aa10.92□□□□□ -0.66
GGA3-209ENST00000580646 CAPSQ13938 189 aa10.92□□□□□ -0.66
GGA3-209ENST00000580646 MCM6Q14566 821 aa10.92□□□□□ -0.66
GGA3-209ENST00000580646 TIGD5Q53EQ6 642 aa10.92□□□□□ -0.66
GGA3-209ENST00000580646 ARSHQ5FYA8 562 aa10.92□□□□□ -0.66
GGA3-209ENST00000580646 FAM102BQ5T8I3 360 aa10.92□□□□□ -0.66
GGA3-209ENST00000580646 CDCA2Q69YH5 1023 aaPredicted RBP10.92□□□□□ -0.66
GGA3-209ENST00000580646 NLRP7Q8WX94 980 aa10.92□□□□□ -0.66
GGA3-209ENST00000580646 FAM122AQ96E09 287 aa10.92□□□□□ -0.66
GGA3-209ENST00000580646 IFT74Q96LB3 600 aa10.92□□□□□ -0.66
GGA3-209ENST00000580646 NTPCRQ9BSD7 190 aaKnown RBP10.92□□□□□ -0.66
GGA3-209ENST00000580646 PLVAPQ9BX97 442 aa10.92□□□□□ -0.66
GGA3-209ENST00000580646 LMAN2LQ9H0V9 348 aa10.92□□□□□ -0.66
GGA3-209ENST00000580646 POLR3FQ9H1D9 316 aaPredicted RBP10.92□□□□□ -0.66
GGA3-209ENST00000580646 C2orf40Q9H1Z8 148 aa10.92□□□□□ -0.66
GGA3-209ENST00000580646 ELAC1Q9H777 363 aaKnown RBP10.92□□□□□ -0.66
GGA3-209ENST00000580646 IFT122Q9HBG6 1241 aa10.92□□□□□ -0.66
GGA3-209ENST00000580646 GDPD2Q9HCC8 539 aa10.92□□□□□ -0.66
GGA3-209ENST00000580646 A0A087WZ62 844 aa10.91□□□□□ -0.66
GGA3-209ENST00000580646 A0A1B0GVL5 298 aa10.91□□□□□ -0.66
GGA3-209ENST00000580646 GOLGA6L4A6NEF3 574 aa10.91□□□□□ -0.66
GGA3-209ENST00000580646 GRM6O15303 877 aa10.91□□□□□ -0.66
GGA3-209ENST00000580646 HIP1RO75146 1068 aa10.91□□□□□ -0.66
GGA3-209ENST00000580646 CSDE1O75534 798 aaKnown RBP10.91□□□□□ -0.66
GGA3-209ENST00000580646 SLFN14P0C7P3 912 aa10.91□□□□□ -0.66
GGA3-209ENST00000580646 FGFR4P22455 802 aa10.91□□□□□ -0.66
GGA3-209ENST00000580646 SFPQP23246 707 aaKnown RBP eCLIP10.91□□□□□ -0.66
GGA3-209ENST00000580646 ABCD1P33897 745 aa10.91□□□□□ -0.66
GGA3-209ENST00000580646 PHKA2P46019 1235 aa10.91□□□□□ -0.66
GGA3-209ENST00000580646 KCNQ1P51787 676 aa10.91□□□□□ -0.66
GGA3-209ENST00000580646 GPBP1Q86WP2 473 aa10.91□□□□□ -0.66
GGA3-209ENST00000580646 DAW1Q8N136 415 aa10.91□□□□□ -0.66
GGA3-209ENST00000580646 PDILTQ8N807 584 aa10.91□□□□□ -0.66
GGA3-209ENST00000580646 FSIP1Q8NA03 581 aa10.91□□□□□ -0.66
GGA3-209ENST00000580646 RNF149Q8NC42 400 aa10.91□□□□□ -0.66
GGA3-209ENST00000580646 ASAP3Q8TDY4 903 aa10.91□□□□□ -0.66
GGA3-209ENST00000580646 ADAMTS19Q8TE59 1207 aa10.91□□□□□ -0.66
GGA3-209ENST00000580646 SPIRE2Q8WWL2 714 aa10.91□□□□□ -0.66
GGA3-209ENST00000580646 PRIMPOLQ96LW4 560 aa10.91□□□□□ -0.66
GGA3-209ENST00000580646 FDXACB1Q9BRP7 624 aaPredicted RBP10.91□□□□□ -0.66
GGA3-209ENST00000580646 UBE2ZQ9H832 354 aaPredicted RBP10.91□□□□□ -0.66
GGA3-209ENST00000580646 GPRC5CQ9NQ84 441 aa10.91□□□□□ -0.66
GGA3-209ENST00000580646 BMP2KQ9NSY1 1161 aaPredicted RBP10.91□□□□□ -0.66
GGA3-209ENST00000580646 TMEM161AQ9NX61 479 aa10.91□□□□□ -0.66
GGA3-209ENST00000580646 LARSQ9P2J5 1176 aaKnown RBP10.91□□□□□ -0.66
GGA3-209ENST00000580646 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.9□□□□□ -0.66
GGA3-209ENST00000580646 FRMD3A2A2Y4 597 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 TBKBP1A7MCY6 615 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 H0YCG3 227 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 ACTN4O43707 911 aaKnown RBP10.9□□□□□ -0.66
GGA3-209ENST00000580646 SSBP05455 408 aaKnown RBP eCLIP10.9□□□□□ -0.66
GGA3-209ENST00000580646 MAPTP10636 758 aaKnown RBP10.9□□□□□ -0.66
GGA3-209ENST00000580646 PLS3P13797 630 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 SYKP43405 635 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 NDUFA8P51970 172 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 EFNA5P52803 228 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 DMP1Q13316 513 aaPredicted RBP10.9□□□□□ -0.66
GGA3-209ENST00000580646 GIT2Q14161 759 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 FAM187BQ17R55 369 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 TCEAL5Q5H9L2 206 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 PPP4R3CPQ6ZMV5 832 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 KSR1Q8IVT5 923 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 ZBTB8OSQ8IWT0 167 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 CEP57L1Q8IYX8 460 aa10.9□□□□□ -0.66
GGA3-209ENST00000580646 KLHL23Q8NBE8 558 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms