RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 CNTNAP2Q9UHC6 1331 aa12.05□□□□□ -0.48
NDEL1-208ENST00000580237 TRIP11Q15643 1979 aa12.05□□□□□ -0.48
NDEL1-208ENST00000580237 CCDC169A6NNP5 214 aa12.04□□□□□ -0.48
NDEL1-208ENST00000580237 B4GALT5O43286 388 aa12.04□□□□□ -0.48
NDEL1-208ENST00000580237 FGF18O76093 207 aa12.04□□□□□ -0.48
NDEL1-208ENST00000580237 PRKCBP05771 671 aa12.04□□□□□ -0.48
NDEL1-208ENST00000580237 ITGA4P13612 1032 aa12.04□□□□□ -0.48
NDEL1-208ENST00000580237 ARF4P18085 180 aaPredicted RBP12.04□□□□□ -0.48
NDEL1-208ENST00000580237 CA8P35219 290 aa12.04□□□□□ -0.48
NDEL1-208ENST00000580237 LONP1P36776 959 aaKnown RBP12.04□□□□□ -0.48
NDEL1-208ENST00000580237 TXLNAP40222 546 aa12.04□□□□□ -0.48
NDEL1-208ENST00000580237 PBX3P40426 434 aa12.04□□□□□ -0.48
NDEL1-208ENST00000580237 TFF2Q03403 129 aa12.04□□□□□ -0.48
NDEL1-208ENST00000580237 PRPF4BQ13523 1007 aaKnown RBP12.04□□□□□ -0.48
NDEL1-208ENST00000580237 NOMO2Q5JPE7 1267 aa12.04□□□□□ -0.48
NDEL1-208ENST00000580237 CDCA2Q69YH5 1023 aaPredicted RBP12.04□□□□□ -0.48
NDEL1-208ENST00000580237 KCNT2Q6UVM3 1135 aa12.04□□□□□ -0.48
NDEL1-208ENST00000580237 MICAL1Q8TDZ2 1067 aa12.04□□□□□ -0.48
NDEL1-208ENST00000580237 POF1BQ8WVV4 589 aa12.04□□□□□ -0.48
NDEL1-208ENST00000580237 BSNDQ8WZ55 320 aa12.04□□□□□ -0.48
NDEL1-208ENST00000580237 SYMPKQ92797 1274 aaKnown RBP12.04□□□□□ -0.48
NDEL1-208ENST00000580237 PRIMPOLQ96LW4 560 aa12.04□□□□□ -0.48
NDEL1-208ENST00000580237 FAM193BQ96PV7 902 aaPredicted RBP12.04□□□□□ -0.48
NDEL1-208ENST00000580237 ADPGKQ9BRR6 497 aa12.04□□□□□ -0.48
NDEL1-208ENST00000580237 MMTAG2Q9BU76 263 aaKnown RBP12.04□□□□□ -0.48
NDEL1-208ENST00000580237 KIFC3Q9BVG8 833 aa12.04□□□□□ -0.48
NDEL1-208ENST00000580237 RUSC1Q9BVN2 902 aa12.04□□□□□ -0.48
NDEL1-208ENST00000580237 CSRNP2Q9H175 543 aa12.04□□□□□ -0.48
NDEL1-208ENST00000580237 ZSCAN16Q9H4T2 348 aaPredicted RBP12.04□□□□□ -0.48
NDEL1-208ENST00000580237 TLR9Q9NR96 1032 aa12.04□□□□□ -0.48
NDEL1-208ENST00000580237 PUF60Q9UHX1 559 aaKnown RBP12.04□□□□□ -0.48
NDEL1-208ENST00000580237 MTMR6Q9Y217 621 aa12.04□□□□□ -0.48
NDEL1-208ENST00000580237 EYSQ5T1H1 3165 aa12.04□□□□□ -0.48
NDEL1-208ENST00000580237 CARNS1A5YM72 827 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 MEIS3P2A8K0S8 358 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 N4BP3O15049 544 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 SLC26A4O43511 780 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 ZNF623O75123 536 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 HIP1RO75146 1068 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 NPTXRO95502 500 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 KCNA5P22460 613 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 MARCKSP29966 332 aaPredicted RBP12.03□□□□□ -0.48
NDEL1-208ENST00000580237 HOXA11P31270 313 aaPredicted RBP12.03□□□□□ -0.48
NDEL1-208ENST00000580237 ALDH7A1P49419 539 aaKnown RBP12.03□□□□□ -0.48
NDEL1-208ENST00000580237 EFNA5P52803 228 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 KRT17Q04695 432 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 UBE3AQ05086 875 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 RAD51AP2Q09MP3 1159 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 UBXN11Q5T124 520 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 FOXD4L5Q5VV16 416 aaPredicted RBP12.03□□□□□ -0.48
NDEL1-208ENST00000580237 FAM173BQ6P4H8 233 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 SLC27A1Q6PCB7 646 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 PPP4R3CPQ6ZMV5 832 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 KCNK18Q7Z418 384 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 CDR2LQ86X02 465 aaPredicted RBP12.03□□□□□ -0.48
NDEL1-208ENST00000580237 KCTD17Q8N5Z5 321 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 SPRYD3Q8NCJ5 442 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 FOXD4L4Q8WXT5 416 aaPredicted RBP12.03□□□□□ -0.48
NDEL1-208ENST00000580237 TMEM169Q96HH4 297 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 ASB2Q96Q27 587 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 EIF2AQ9BY44 585 aaKnown RBP12.03□□□□□ -0.48
NDEL1-208ENST00000580237 CWH43Q9H720 699 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 UBE2ZQ9H832 354 aaPredicted RBP12.03□□□□□ -0.48
NDEL1-208ENST00000580237 ENTPD7Q9NQZ7 604 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 TBC1D13Q9NVG8 400 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 CLDND1Q9NY35 253 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 SPG21Q9NZD8 308 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 IPPQ9Y573 584 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 CLIC4Q9Y696 253 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 PHLPP2Q6ZVD8 1323 aa12.03□□□□□ -0.48
NDEL1-208ENST00000580237 PRUNE2Q8WUY3 3088 aa12.02□□□□□ -0.49
NDEL1-208ENST00000580237 DLL1O00548 723 aa12.02□□□□□ -0.49
NDEL1-208ENST00000580237 KRT18P05783 430 aaKnown RBP12.02□□□□□ -0.49
NDEL1-208ENST00000580237 PLA2G4BP0C869 781 aa12.02□□□□□ -0.49
NDEL1-208ENST00000580237 NCLP19338 710 aaKnown RBP12.02□□□□□ -0.49
NDEL1-208ENST00000580237 MLH1P40692 756 aa12.02□□□□□ -0.49
NDEL1-208ENST00000580237 PEX3P56589 373 aa12.02□□□□□ -0.49
NDEL1-208ENST00000580237 DHX8Q14562 1220 aaKnown RBP12.02□□□□□ -0.49
NDEL1-208ENST00000580237 STK38Q15208 465 aa12.02□□□□□ -0.49
NDEL1-208ENST00000580237 AMHR2Q16671 573 aa12.02□□□□□ -0.49
NDEL1-208ENST00000580237 TMEM119Q4V9L6 283 aa12.02□□□□□ -0.49
NDEL1-208ENST00000580237 HYIQ5T013 277 aa12.02□□□□□ -0.49
NDEL1-208ENST00000580237 RINT1Q6NUQ1 792 aa12.02□□□□□ -0.49
NDEL1-208ENST00000580237 LRRC55Q6ZSA7 311 aa12.02□□□□□ -0.49
NDEL1-208ENST00000580237 APBB1IPQ7Z5R6 666 aaPredicted RBP12.02□□□□□ -0.49
NDEL1-208ENST00000580237 SPPL3Q8TCT6 385 aa12.02□□□□□ -0.49
NDEL1-208ENST00000580237 PNMA5Q96PV4 448 aa12.02□□□□□ -0.49
NDEL1-208ENST00000580237 RPS6KC1Q96S38 1066 aa12.02□□□□□ -0.49
NDEL1-208ENST00000580237 TIPINQ9BVW5 301 aa12.02□□□□□ -0.49
NDEL1-208ENST00000580237 NXF3Q9H4D5 531 aaKnown RBP12.02□□□□□ -0.49
NDEL1-208ENST00000580237 IGFLR1Q9H665 355 aa12.02□□□□□ -0.49
NDEL1-208ENST00000580237 POLD4Q9HCU8 107 aa12.02□□□□□ -0.49
NDEL1-208ENST00000580237 UBN1Q9NPG3 1134 aa12.02□□□□□ -0.49
NDEL1-208ENST00000580237 KMT5AQ9NQR1 393 aa12.02□□□□□ -0.49
NDEL1-208ENST00000580237 KANSL3Q9P2N6 904 aa12.02□□□□□ -0.49
NDEL1-208ENST00000580237 HES2Q9Y543 173 aa12.02□□□□□ -0.49
NDEL1-208ENST00000580237 NCK2O43639 380 aa12.01□□□□□ -0.49
NDEL1-208ENST00000580237 TBCAO75347 108 aaKnown RBP12.01□□□□□ -0.49
NDEL1-208ENST00000580237 OFD1O75665 1012 aa12.01□□□□□ -0.49
NDEL1-208ENST00000580237 POMCP01189 267 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms