RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 ADRB2P07550 413 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 NR1D1P20393 614 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 LMNB1P20700 586 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 VAMP7P51809 220 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 MTMR1Q13613 665 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 MESDQ14696 234 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 C2CD6Q53TS8 623 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 C1orf220Q5T0J3 134 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 CHADLQ6NUI6 762 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 B3GNT9Q6UX72 402 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 HAUS6Q7Z4H7 955 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 RPUSD2Q8IZ73 545 aaKnown RBP11.34□□□□□ -0.59
TOP3A-209ENST00000580095 PCDHB18PQ96TA0 734 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 GMLQ99445 158 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 SYT11Q9BT88 431 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 HSPBP1Q9NZL4 362 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 STK24Q9Y6E0 443 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 SMIM23A6NLE4 172 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 ANKRD63C9JTQ0 380 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 WNT10BO00744 389 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 NDUFAB1O14561 156 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 DDX3YO15523 660 aaKnown RBP11.34□□□□□ -0.59
TOP3A-209ENST00000580095 PPP1R37O75864 691 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 YWHABP31946 246 aaKnown RBP11.34□□□□□ -0.59
TOP3A-209ENST00000580095 RPS6P62753 249 aaKnown RBP11.34□□□□□ -0.59
TOP3A-209ENST00000580095 RASA3Q14644 834 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 STXBP4Q6ZWJ1 553 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 SLC47A2Q86VL8 602 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 LMBR1Q8WVP7 490 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 DHX38Q92620 1227 aaKnown RBP11.34□□□□□ -0.59
TOP3A-209ENST00000580095 RUBCNQ92622 972 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 AGPAT1Q99943 283 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 LARSQ9P2J5 1176 aaKnown RBP11.34□□□□□ -0.59
TOP3A-209ENST00000580095 ODF2LQ9ULJ1 636 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 ATP8A1Q9Y2Q0 1164 aa11.34□□□□□ -0.59
TOP3A-209ENST00000580095 COL4A5P29400 1685 aa11.33□□□□□ -0.59
TOP3A-209ENST00000580095 TCRBV7S2A1N4TA0A589 114 aa11.33□□□□□ -0.6
TOP3A-209ENST00000580095 P4HBP07237 508 aaKnown RBP11.33□□□□□ -0.6
TOP3A-209ENST00000580095 TMOD1P28289 359 aa11.33□□□□□ -0.6
TOP3A-209ENST00000580095 LIG3P49916 1009 aa11.33□□□□□ -0.6
TOP3A-209ENST00000580095 DHX9Q08211 1270 aaKnown RBP11.33□□□□□ -0.6
TOP3A-209ENST00000580095 WHAMMQ8TF30 809 aa11.33□□□□□ -0.6
TOP3A-209ENST00000580095 SEMA4DQ92854 862 aa11.33□□□□□ -0.6
TOP3A-209ENST00000580095 C18orf8Q96DM3 657 aa11.33□□□□□ -0.6
TOP3A-209ENST00000580095 PI4K2AQ9BTU6 479 aa11.33□□□□□ -0.6
TOP3A-209ENST00000580095 EHMT1Q9H9B1 1298 aa11.33□□□□□ -0.6
TOP3A-209ENST00000580095 PPANQ9NQ55 473 aaKnown RBP11.33□□□□□ -0.6
TOP3A-209ENST00000580095 SEL1LQ9UBV2 794 aa11.33□□□□□ -0.6
TOP3A-209ENST00000580095 FEM1BQ9UK73 627 aa11.33□□□□□ -0.6
TOP3A-209ENST00000580095 ALG6Q9Y672 507 aa11.33□□□□□ -0.6
TOP3A-209ENST00000580095 CCNE2O96020 404 aa11.33□□□□□ -0.6
TOP3A-209ENST00000580095 ICAM1P05362 532 aa11.33□□□□□ -0.6
TOP3A-209ENST00000580095 TMEM253P0C7T8 217 aa11.33□□□□□ -0.6
TOP3A-209ENST00000580095 SSTR3P32745 418 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-209ENST00000580095 PTGER2P43116 358 aa11.33□□□□□ -0.6
TOP3A-209ENST00000580095 PPATQ06203 517 aa11.33□□□□□ -0.6
TOP3A-209ENST00000580095 ZNF844Q08AG5 666 aa11.33□□□□□ -0.6
TOP3A-209ENST00000580095 XKR9Q5GH70 373 aa11.33□□□□□ -0.6
TOP3A-209ENST00000580095 LMBRD2Q68DH5 695 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-209ENST00000580095 TTLL6Q8N841 843 aa11.33□□□□□ -0.6
TOP3A-209ENST00000580095 SYTL5Q8TDW5 730 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-209ENST00000580095 ATP6V1G3Q96LB4 118 aa11.33□□□□□ -0.6
TOP3A-209ENST00000580095 MKNK1Q9BUB5 465 aa11.33□□□□□ -0.6
TOP3A-209ENST00000580095 AGO4Q9HCK5 861 aaKnown RBP11.33□□□□□ -0.6
TOP3A-209ENST00000580095 TCEAL9Q9UHQ7 104 aa11.33□□□□□ -0.6
TOP3A-209ENST00000580095 SNX24Q9Y343 169 aa11.33□□□□□ -0.6
TOP3A-209ENST00000580095 CCDC189A1A4V9 331 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 DLATP10515 647 aaKnown RBP11.32□□□□□ -0.6
TOP3A-209ENST00000580095 DPEP1P16444 411 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 HSPA9P38646 679 aaKnown RBP11.32□□□□□ -0.6
TOP3A-209ENST00000580095 QARSP47897 775 aaKnown RBP11.32□□□□□ -0.6
TOP3A-209ENST00000580095 SETQ01105 290 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-209ENST00000580095 ODF2Q5BJF6 829 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 NOP9Q86U38 636 aaKnown RBP11.32□□□□□ -0.6
TOP3A-209ENST00000580095 SYCE1Q8N0S2 351 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 RIT2Q99578 217 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 STRA6Q9BX79 667 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 TMEM117Q9H0C3 514 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 PTPN22Q9Y2R2 807 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 RIPK3Q9Y572 518 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 MYO1FO00160 1098 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 EBAG9O00559 213 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 MMEP08473 750 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 ADSSP30520 456 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 LSP1P33241 339 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 HSD17B4P51659 736 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 PLTPP55058 493 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 CXCL9Q07325 125 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 MTMR2Q13614 643 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 PPP2R5AQ15172 486 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 LLGL2Q6P1M3 1020 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 FAM160B2Q86V87 743 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 ZDHHC14Q8IZN3 488 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 KREMEN1Q96MU8 473 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 RMDN3Q96TC7 470 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 FAM169AQ9Y6X4 670 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 A0A0A6YYK5 440 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-209ENST00000580095 H0YGN5 161 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 ASNSP08243 561 aa11.32□□□□□ -0.6
TOP3A-209ENST00000580095 MYZAPP0CAP1 466 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms