RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 CCDC195A0A1B0GUA6 201 aa13.72□□□□□ -0.21
CDK5RAP3-216ENST00000579853 NARSO43776 548 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-216ENST00000579853 CSDE1O75534 798 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-216ENST00000579853 GLUD1P00367 558 aa13.72□□□□□ -0.21
CDK5RAP3-216ENST00000579853 SSBP05455 408 aaKnown RBP eCLIP13.72□□□□□ -0.21
CDK5RAP3-216ENST00000579853 C1orf210Q8IVY1 113 aa13.72□□□□□ -0.21
CDK5RAP3-216ENST00000579853 SHDQ96IW2 340 aa13.72□□□□□ -0.21
CDK5RAP3-216ENST00000579853 FDXACB1Q9BRP7 624 aaPredicted RBP13.72□□□□□ -0.21
CDK5RAP3-216ENST00000579853 VN1R3Q9BXE9 311 aa13.72□□□□□ -0.21
CDK5RAP3-216ENST00000579853 TEKT3Q9BXF9 490 aa13.72□□□□□ -0.21
CDK5RAP3-216ENST00000579853 PLEKHA4Q9H4M7 779 aa13.72□□□□□ -0.21
CDK5RAP3-216ENST00000579853 RSAD1Q9HA92 442 aa13.72□□□□□ -0.21
CDK5RAP3-216ENST00000579853 MAN1C1Q9NR34 630 aa13.72□□□□□ -0.21
CDK5RAP3-216ENST00000579853 DLL3Q9NYJ7 618 aa13.72□□□□□ -0.21
CDK5RAP3-216ENST00000579853 N4BP1O75113 896 aaKnown RBP13.71□□□□□ -0.21
CDK5RAP3-216ENST00000579853 USP11P51784 963 aa13.71□□□□□ -0.21
CDK5RAP3-216ENST00000579853 AK2P54819 239 aa13.71□□□□□ -0.21
CDK5RAP3-216ENST00000579853 COL9A3Q14050 684 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-216ENST00000579853 LONRF3Q496Y0 759 aa13.71□□□□□ -0.21
CDK5RAP3-216ENST00000579853 LRCH2Q5VUJ6 765 aa13.71□□□□□ -0.21
CDK5RAP3-216ENST00000579853 DHX32Q7L7V1 743 aaKnown RBP13.71□□□□□ -0.21
CDK5RAP3-216ENST00000579853 MRPL10Q7Z7H8 261 aaKnown RBP13.71□□□□□ -0.21
CDK5RAP3-216ENST00000579853 ZNF280BQ86YH2 543 aa13.71□□□□□ -0.21
CDK5RAP3-216ENST00000579853 RHPN2Q8IUC4 686 aa13.71□□□□□ -0.21
CDK5RAP3-216ENST00000579853 EXOC8Q8IYI6 725 aa13.71□□□□□ -0.21
CDK5RAP3-216ENST00000579853 GPR161Q8N6U8 529 aaKnown RBP13.71□□□□□ -0.21
CDK5RAP3-216ENST00000579853 RIN2Q8WYP3 895 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-216ENST00000579853 LENG9Q96B70 501 aa13.71□□□□□ -0.21
CDK5RAP3-216ENST00000579853 RPS6KC1Q96S38 1066 aa13.71□□□□□ -0.21
CDK5RAP3-216ENST00000579853 UBN1Q9NPG3 1134 aa13.71□□□□□ -0.21
CDK5RAP3-216ENST00000579853 ARHGEF3Q9NR81 526 aa13.71□□□□□ -0.21
CDK5RAP3-216ENST00000579853 SUCLA2Q9P2R7 463 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-216ENST00000579853 SEPT9Q9UHD8 586 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-216ENST00000579853 BRPF3Q9ULD4 1205 aa13.71□□□□□ -0.21
CDK5RAP3-216ENST00000579853 CA14Q9ULX7 337 aa13.71□□□□□ -0.21
CDK5RAP3-216ENST00000579853 PCDHB2Q9Y5E7 798 aa13.71□□□□□ -0.21
CDK5RAP3-216ENST00000579853 ZFP37Q9Y6Q3 630 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-216ENST00000579853 USP24Q9UPU5 2620 aa13.71□□□□□ -0.22
CDK5RAP3-216ENST00000579853 KLF18A0A0U1RQI7 1052 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 NRP1O14786 923 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 INPPL1O15357 1258 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 MSH4O15457 936 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 KINO60870 393 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 MAFO75444 373 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 NR1I2O75469 434 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 PAPLNO95428 1278 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 SP9P0CG40 484 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 EXOSC10Q01780 885 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 DRP2Q13474 957 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 UGCGQ16739 394 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 MTERF2Q49AM1 385 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 SPECC1Q5M775 1068 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 MIER3Q7Z3K6 550 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 GPR65Q8IYL9 337 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 CNNM3Q8NE01 707 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 CCDC148Q8NFR7 591 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 GPR152Q8TDT2 470 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 RSAD2Q8WXG1 361 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 SMG7Q92540 1137 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 SLC5A5Q92911 643 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 CCDC136Q96JN2 1154 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 ESYT1Q9BSJ8 1104 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 HERC2P3Q9BVR0 1158 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 ANO2Q9NQ90 1003 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 SLC2A4RGQ9NR83 387 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 AGPAT5Q9NUQ2 364 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 DLGAP2Q9P1A6 1054 aa13.7□□□□□ -0.22
CDK5RAP3-216ENST00000579853 CNOT1A5YKK6 2376 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-216ENST00000579853 ANKRD11Q6UB99 2663 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP3-216ENST00000579853 MEIS3P2A8K0S8 358 aa13.69□□□□□ -0.22
CDK5RAP3-216ENST00000579853 C2CD2LO14523 706 aa13.69□□□□□ -0.22
CDK5RAP3-216ENST00000579853 TEX28O15482 410 aa13.69□□□□□ -0.22
CDK5RAP3-216ENST00000579853 CHMP2AO43633 222 aa13.69□□□□□ -0.22
CDK5RAP3-216ENST00000579853 DDHD2O94830 711 aa13.69□□□□□ -0.22
CDK5RAP3-216ENST00000579853 HMGB1P09429 215 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-216ENST00000579853 LAMP2P13473 410 aa13.69□□□□□ -0.22
CDK5RAP3-216ENST00000579853 CDC27P30260 824 aa13.69□□□□□ -0.22
CDK5RAP3-216ENST00000579853 GLUD2P49448 558 aa13.69□□□□□ -0.22
CDK5RAP3-216ENST00000579853 AKAP17AQ02040 695 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-216ENST00000579853 ZNF528Q3MIS6 628 aa13.69□□□□□ -0.22
CDK5RAP3-216ENST00000579853 DCLRE1AQ6PJP8 1040 aa13.69□□□□□ -0.22
CDK5RAP3-216ENST00000579853 AGMOQ6ZNB7 445 aa13.69□□□□□ -0.22
CDK5RAP3-216ENST00000579853 FEZF2Q8TBJ5 459 aa13.69□□□□□ -0.22
CDK5RAP3-216ENST00000579853 PHKBQ93100 1093 aa13.69□□□□□ -0.22
CDK5RAP3-216ENST00000579853 MYADMQ96S97 322 aa13.69□□□□□ -0.22
CDK5RAP3-216ENST00000579853 C22orf23Q9BZE7 217 aa13.69□□□□□ -0.22
CDK5RAP3-216ENST00000579853 UNC45AQ9H3U1 944 aa13.69□□□□□ -0.22
CDK5RAP3-216ENST00000579853 PIDD1Q9HB75 910 aa13.69□□□□□ -0.22
CDK5RAP3-216ENST00000579853 RXFP1Q9HBX9 757 aa13.69□□□□□ -0.22
CDK5RAP3-216ENST00000579853 FAM217BQ9NTX9 383 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP3-216ENST00000579853 ZDHHC7Q9NXF8 308 aa13.69□□□□□ -0.22
CDK5RAP3-216ENST00000579853 MTCL1Q9Y4B5 1905 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-216ENST00000579853 SPTLC1O15269 473 aa13.68□□□□□ -0.22
CDK5RAP3-216ENST00000579853 B4GALT3O60512 393 aa13.68□□□□□ -0.22
CDK5RAP3-216ENST00000579853 DCNP07585 359 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-216ENST00000579853 FGD1P98174 961 aa13.68□□□□□ -0.22
CDK5RAP3-216ENST00000579853 KRT32Q14532 448 aa13.68□□□□□ -0.22
CDK5RAP3-216ENST00000579853 KIAA0319Q5VV43 1072 aa13.68□□□□□ -0.22
CDK5RAP3-216ENST00000579853 SRGAP1Q7Z6B7 1085 aa13.68□□□□□ -0.22
CDK5RAP3-216ENST00000579853 PJA1Q8NG27 643 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms