RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 TSPYL2Q9H2G4 693 aaPredicted RBP17.13■□□□□ 0.33
SLC6A4-205ENST00000579221 OLFML3Q9NRN5 406 aa17.13■□□□□ 0.33
SLC6A4-205ENST00000579221 AGPAT5Q9NUQ2 364 aa17.13■□□□□ 0.33
SLC6A4-205ENST00000579221 RNF216Q9NWF9 866 aaPredicted RBP17.13■□□□□ 0.33
SLC6A4-205ENST00000579221 PIN4Q9Y237 131 aaKnown RBP17.13■□□□□ 0.33
SLC6A4-205ENST00000579221 PCDHB13Q9Y5F0 798 aa17.13■□□□□ 0.33
SLC6A4-205ENST00000579221 SLC4A7Q9Y6M7 1214 aa17.13■□□□□ 0.33
SLC6A4-205ENST00000579221 ADGRA3Q8IWK6 1321 aa17.13■□□□□ 0.33
SLC6A4-205ENST00000579221 TANC1Q9C0D5 1861 aa17.12■□□□□ 0.33
SLC6A4-205ENST00000579221 TSPAN1O60635 241 aa17.12■□□□□ 0.33
SLC6A4-205ENST00000579221 HOXA11P31270 313 aaPredicted RBP17.12■□□□□ 0.33
SLC6A4-205ENST00000579221 WDR5P61964 334 aaKnown RBP17.12■□□□□ 0.33
SLC6A4-205ENST00000579221 DPYDQ12882 1025 aa17.12■□□□□ 0.33
SLC6A4-205ENST00000579221 PSMD2Q13200 908 aa17.12■□□□□ 0.33
SLC6A4-205ENST00000579221 POSTNQ15063 836 aa17.12■□□□□ 0.33
SLC6A4-205ENST00000579221 AMHR2Q16671 573 aa17.12■□□□□ 0.33
SLC6A4-205ENST00000579221 RASIP1Q5U651 963 aa17.12■□□□□ 0.33
SLC6A4-205ENST00000579221 SLC24A5Q71RS6 500 aa17.12■□□□□ 0.33
SLC6A4-205ENST00000579221 PHOSPHO2Q8TCD6 241 aa17.12■□□□□ 0.33
SLC6A4-205ENST00000579221 KCNN1Q92952 543 aa17.12■□□□□ 0.33
SLC6A4-205ENST00000579221 FIZ1Q96SL8 496 aa17.12■□□□□ 0.33
SLC6A4-205ENST00000579221 PRO3102Q9H379 93 aa17.12■□□□□ 0.33
SLC6A4-205ENST00000579221 ST6GALNAC4Q9H4F1 302 aa17.12■□□□□ 0.33
SLC6A4-205ENST00000579221 TBC1D7Q9P0N9 293 aa17.12■□□□□ 0.33
SLC6A4-205ENST00000579221 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.11■□□□□ 0.33
SLC6A4-205ENST00000579221 MGEA5O60502 916 aa17.11■□□□□ 0.33
SLC6A4-205ENST00000579221 SMC2O95347 1197 aa17.11■□□□□ 0.33
SLC6A4-205ENST00000579221 RPN1P04843 607 aaKnown RBP17.11■□□□□ 0.33
SLC6A4-205ENST00000579221 PRR29P0C7W0 189 aa17.11■□□□□ 0.33
SLC6A4-205ENST00000579221 SKIP12755 728 aa17.11■□□□□ 0.33
SLC6A4-205ENST00000579221 ARF4P18085 180 aaPredicted RBP17.11■□□□□ 0.33
SLC6A4-205ENST00000579221 GTF2BQ00403 316 aa17.11■□□□□ 0.33
SLC6A4-205ENST00000579221 ALCAMQ13740 583 aa17.11■□□□□ 0.33
SLC6A4-205ENST00000579221 KMT5BQ4FZB7 885 aa17.11■□□□□ 0.33
SLC6A4-205ENST00000579221 TWF2Q6IBS0 349 aaKnown RBP17.11■□□□□ 0.33
SLC6A4-205ENST00000579221 NOTUMQ6P988 496 aa17.11■□□□□ 0.33
SLC6A4-205ENST00000579221 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.11■□□□□ 0.33
SLC6A4-205ENST00000579221 STXBP4Q6ZWJ1 553 aa17.11■□□□□ 0.33
SLC6A4-205ENST00000579221 CCDC51Q96ER9 411 aa17.11■□□□□ 0.33
SLC6A4-205ENST00000579221 CPB2Q96IY4 423 aa17.11■□□□□ 0.33
SLC6A4-205ENST00000579221 MRPL4Q9BYD3 311 aaKnown RBP17.11■□□□□ 0.33
SLC6A4-205ENST00000579221 EXOC1Q9NV70 894 aa17.11■□□□□ 0.33
SLC6A4-205ENST00000579221 CXXC1Q9P0U4 656 aaPredicted RBP17.11■□□□□ 0.33
SLC6A4-205ENST00000579221 TBX20Q9UMR3 447 aa17.11■□□□□ 0.33
SLC6A4-205ENST00000579221 COLQQ9Y215 455 aaPredicted RBP17.11■□□□□ 0.33
SLC6A4-205ENST00000579221 SCN5AQ14524 2016 aa17.11■□□□□ 0.33
SLC6A4-205ENST00000579221 A0A1B0GUA9 196 aa17.1■□□□□ 0.33
SLC6A4-205ENST00000579221 A0A1W2PPC1 479 aa17.1■□□□□ 0.33
SLC6A4-205ENST00000579221 RBAK-RBAKDNI3L0D1 243 aa17.1■□□□□ 0.33
SLC6A4-205ENST00000579221 N4BP3O15049 544 aa17.1■□□□□ 0.33
SLC6A4-205ENST00000579221 B4GALT5O43286 388 aa17.1■□□□□ 0.33
SLC6A4-205ENST00000579221 KLRC4O43908 158 aa17.1■□□□□ 0.33
SLC6A4-205ENST00000579221 GCNT3O95395 438 aa17.1■□□□□ 0.33
SLC6A4-205ENST00000579221 STAG3L1P0CL83 205 aa17.1■□□□□ 0.33
SLC6A4-205ENST00000579221 MCM4P33991 863 aa17.1■□□□□ 0.33
SLC6A4-205ENST00000579221 SARSP49591 514 aaKnown RBP17.1■□□□□ 0.33
SLC6A4-205ENST00000579221 FAM189BP81408 668 aa17.1■□□□□ 0.33
SLC6A4-205ENST00000579221 FAM26FQ5R3K3 315 aa17.1■□□□□ 0.33
SLC6A4-205ENST00000579221 TAS1R3Q7RTX0 852 aa17.1■□□□□ 0.33
SLC6A4-205ENST00000579221 APBB1IPQ7Z5R6 666 aaPredicted RBP17.1■□□□□ 0.33
SLC6A4-205ENST00000579221 MYOCDQ8IZQ8 938 aa17.1■□□□□ 0.33
SLC6A4-205ENST00000579221 HVCN1Q96D96 273 aa17.1■□□□□ 0.33
SLC6A4-205ENST00000579221 SLC9A7Q96T83 725 aa17.1■□□□□ 0.33
SLC6A4-205ENST00000579221 TRAIPQ9BWF2 469 aa17.1■□□□□ 0.33
SLC6A4-205ENST00000579221 LRFN2Q9ULH4 789 aa17.1■□□□□ 0.33
SLC6A4-205ENST00000579221 PCDHB7Q9Y5E2 793 aa17.1■□□□□ 0.33
SLC6A4-205ENST00000579221 A0A0U1RQF3 1178 aa17.09■□□□□ 0.33
SLC6A4-205ENST00000579221 C9IYK1 514 aa17.09■□□□□ 0.33
SLC6A4-205ENST00000579221 ATP2A2P16615 1042 aaKnown RBP17.09■□□□□ 0.33
SLC6A4-205ENST00000579221 EHHADHQ08426 723 aa17.09■□□□□ 0.33
SLC6A4-205ENST00000579221 PNOCQ13519 176 aa17.09■□□□□ 0.33
SLC6A4-205ENST00000579221 ZC2HC1CQ53FD0 456 aaPredicted RBP17.09■□□□□ 0.33
SLC6A4-205ENST00000579221 NT5DC1Q5TFE4 455 aa17.09■□□□□ 0.33
SLC6A4-205ENST00000579221 ATF7IP2Q5U623 682 aa17.09■□□□□ 0.33
SLC6A4-205ENST00000579221 LINC01599Q8WXQ3 324 aa17.09■□□□□ 0.33
SLC6A4-205ENST00000579221 TOP1MTQ969P6 601 aa17.09■□□□□ 0.33
SLC6A4-205ENST00000579221 BICD1Q96G01 975 aa17.09■□□□□ 0.33
SLC6A4-205ENST00000579221 ACCSQ96QU6 501 aa17.09■□□□□ 0.33
SLC6A4-205ENST00000579221 ACO2Q99798 780 aaKnown RBP17.09■□□□□ 0.33
SLC6A4-205ENST00000579221 ADPGKQ9BRR6 497 aa17.09■□□□□ 0.33
SLC6A4-205ENST00000579221 STRA6Q9BX79 667 aa17.09■□□□□ 0.33
SLC6A4-205ENST00000579221 ELAC1Q9H777 363 aaKnown RBP17.09■□□□□ 0.33
SLC6A4-205ENST00000579221 RMND1Q9NWS8 449 aa17.09■□□□□ 0.33
SLC6A4-205ENST00000579221 EXOC7Q9UPT5 735 aa17.09■□□□□ 0.33
SLC6A4-205ENST00000579221 CNTNAP2Q9UHC6 1331 aa17.09■□□□□ 0.33
SLC6A4-205ENST00000579221 SIP14410 1827 aa17.08■□□□□ 0.33
SLC6A4-205ENST00000579221 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.08■□□□□ 0.32
SLC6A4-205ENST00000579221 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.08■□□□□ 0.32
SLC6A4-205ENST00000579221 RHOBTB3O94955 611 aa17.08■□□□□ 0.32
SLC6A4-205ENST00000579221 EOMESO95936 686 aa17.08■□□□□ 0.32
SLC6A4-205ENST00000579221 MYBP10242 640 aa17.08■□□□□ 0.32
SLC6A4-205ENST00000579221 RAB27AP51159 221 aa17.08■□□□□ 0.32
SLC6A4-205ENST00000579221 DEFB103AP81534 67 aa17.08■□□□□ 0.32
SLC6A4-205ENST00000579221 KCNB1Q14721 858 aa17.08■□□□□ 0.32
SLC6A4-205ENST00000579221 L1TD1Q5T7N2 865 aaKnown RBP17.08■□□□□ 0.32
SLC6A4-205ENST00000579221 SLC27A1Q6PCB7 646 aa17.08■□□□□ 0.32
SLC6A4-205ENST00000579221 ZPBP2Q6X784 338 aa17.08■□□□□ 0.32
SLC6A4-205ENST00000579221 ECHDC2Q86YB7 292 aa17.08■□□□□ 0.32
SLC6A4-205ENST00000579221 NPAS4Q8IUM7 802 aa17.08■□□□□ 0.32
SLC6A4-205ENST00000579221 HPS3Q969F9 1004 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms