RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 NT5C3AQ9H0P0 336 aa16.44■□□□□ 0.22
SS18-212ENST00000579061 CSRNP2Q9H175 543 aa16.44■□□□□ 0.22
SS18-212ENST00000579061 HCSTQ9UBK5 93 aa16.44■□□□□ 0.22
SS18-212ENST00000579061 XIRP2A4UGR9 3374 aa16.44■□□□□ 0.22
SS18-212ENST00000579061 PP2D1A8MPX8 630 aa16.43■□□□□ 0.22
SS18-212ENST00000579061 OFD1O75665 1012 aa16.43■□□□□ 0.22
SS18-212ENST00000579061 ARF4P18085 180 aaPredicted RBP16.43■□□□□ 0.22
SS18-212ENST00000579061 SYT1P21579 422 aa16.43■□□□□ 0.22
SS18-212ENST00000579061 NAMPTP43490 491 aa16.43■□□□□ 0.22
SS18-212ENST00000579061 NOMO2Q5JPE7 1267 aa16.43■□□□□ 0.22
SS18-212ENST00000579061 AGMOQ6ZNB7 445 aa16.43■□□□□ 0.22
SS18-212ENST00000579061 MRPS27Q92552 414 aaKnown RBP16.43■□□□□ 0.22
SS18-212ENST00000579061 LPPQ93052 612 aa16.43■□□□□ 0.22
SS18-212ENST00000579061 UBN1Q9NPG3 1134 aa16.43■□□□□ 0.22
SS18-212ENST00000579061 PRMT7Q9NVM4 692 aaPredicted RBP16.43■□□□□ 0.22
SS18-212ENST00000579061 SPG21Q9NZD8 308 aa16.43■□□□□ 0.22
SS18-212ENST00000579061 MYH11P35749 1972 aa16.42■□□□□ 0.22
SS18-212ENST00000579061 A0A1B0GUA9 196 aa16.42■□□□□ 0.22
SS18-212ENST00000579061 VWA3AA6NCI4 1184 aa16.42■□□□□ 0.22
SS18-212ENST00000579061 MEIS3P2A8K0S8 358 aa16.42■□□□□ 0.22
SS18-212ENST00000579061 E9PMD0 336 aa16.42■□□□□ 0.22
SS18-212ENST00000579061 CDC25AP30304 524 aa16.42■□□□□ 0.22
SS18-212ENST00000579061 CTC1Q2NKJ3 1217 aa16.42■□□□□ 0.22
SS18-212ENST00000579061 LEXMQ3ZCV2 418 aa16.42■□□□□ 0.22
SS18-212ENST00000579061 SMG8Q8ND04 991 aaKnown RBP16.42■□□□□ 0.22
SS18-212ENST00000579061 URGCPQ8TCY9 931 aa16.42■□□□□ 0.22
SS18-212ENST00000579061 BSNDQ8WZ55 320 aa16.42■□□□□ 0.22
SS18-212ENST00000579061 IFT74Q96LB3 600 aa16.42■□□□□ 0.22
SS18-212ENST00000579061 FZD8Q9H461 694 aa16.42■□□□□ 0.22
SS18-212ENST00000579061 RSAD1Q9HA92 442 aa16.42■□□□□ 0.22
SS18-212ENST00000579061 TLR9Q9NR96 1032 aa16.42■□□□□ 0.22
SS18-212ENST00000579061 TBC1D13Q9NVG8 400 aa16.42■□□□□ 0.22
SS18-212ENST00000579061 KANSL3Q9P2N6 904 aa16.42■□□□□ 0.22
SS18-212ENST00000579061 PUF60Q9UHX1 559 aaKnown RBP16.42■□□□□ 0.22
SS18-212ENST00000579061 TDRD15B5MCY1 1934 aaKnown RBP16.41■□□□□ 0.22
SS18-212ENST00000579061 INPPL1O15357 1258 aa16.41■□□□□ 0.22
SS18-212ENST00000579061 ITGA4P13612 1032 aa16.41■□□□□ 0.22
SS18-212ENST00000579061 IRS1P35568 1242 aa16.41■□□□□ 0.22
SS18-212ENST00000579061 ALDH7A1P49419 539 aaKnown RBP16.41■□□□□ 0.22
SS18-212ENST00000579061 KCNQ1P51787 676 aa16.41■□□□□ 0.22
SS18-212ENST00000579061 EFNA5P52803 228 aa16.41■□□□□ 0.22
SS18-212ENST00000579061 KRT17Q04695 432 aa16.41■□□□□ 0.22
SS18-212ENST00000579061 HYAL1Q12794 435 aa16.41■□□□□ 0.22
SS18-212ENST00000579061 MAPK6Q16659 721 aa16.41■□□□□ 0.22
SS18-212ENST00000579061 HACE1Q8IYU2 909 aa16.41■□□□□ 0.22
SS18-212ENST00000579061 SLC39A11Q8N1S5 342 aa16.41■□□□□ 0.22
SS18-212ENST00000579061 ADAMTS19Q8TE59 1207 aa16.41■□□□□ 0.22
SS18-212ENST00000579061 CPB2Q96IY4 423 aa16.41■□□□□ 0.22
SS18-212ENST00000579061 TIPINQ9BVW5 301 aa16.41■□□□□ 0.22
SS18-212ENST00000579061 EIF2AQ9BY44 585 aaKnown RBP16.41■□□□□ 0.22
SS18-212ENST00000579061 IPPQ9Y573 584 aa16.41■□□□□ 0.22
SS18-212ENST00000579061 ZMYM2Q9UBW7 1377 aa16.4■□□□□ 0.22
SS18-212ENST00000579061 FSD2A1L4K1 749 aa16.4■□□□□ 0.22
SS18-212ENST00000579061 FSCN2O14926 492 aa16.4■□□□□ 0.22
SS18-212ENST00000579061 KCNA5P22460 613 aa16.4■□□□□ 0.22
SS18-212ENST00000579061 LONP1P36776 959 aaKnown RBP16.4■□□□□ 0.22
SS18-212ENST00000579061 BCAR1P56945 870 aa16.4■□□□□ 0.22
SS18-212ENST00000579061 RESTQ13127 1097 aa16.4■□□□□ 0.22
SS18-212ENST00000579061 SF3A1Q15459 793 aaKnown RBP16.4■□□□□ 0.22
SS18-212ENST00000579061 PUS10Q3MIT2 529 aaKnown RBP16.4■□□□□ 0.22
SS18-212ENST00000579061 RINT1Q6NUQ1 792 aa16.4■□□□□ 0.22
SS18-212ENST00000579061 SLC27A1Q6PCB7 646 aa16.4■□□□□ 0.22
SS18-212ENST00000579061 C1orf186Q6ZWK4 172 aa16.4■□□□□ 0.22
SS18-212ENST00000579061 KCNK18Q7Z418 384 aa16.4■□□□□ 0.22
SS18-212ENST00000579061 DEPTORQ8TB45 409 aa16.4■□□□□ 0.22
SS18-212ENST00000579061 CDK5RAP3Q96JB5 506 aa16.4■□□□□ 0.22
SS18-212ENST00000579061 PNMA5Q96PV4 448 aa16.4■□□□□ 0.22
SS18-212ENST00000579061 TRIM6Q9C030 488 aaPredicted RBP16.4■□□□□ 0.22
SS18-212ENST00000579061 CCDC113Q9H0I3 377 aa16.4■□□□□ 0.22
SS18-212ENST00000579061 NRDE2Q9H7Z3 1164 aa16.4■□□□□ 0.22
SS18-212ENST00000579061 C17orf75Q9HAS0 396 aa16.4■□□□□ 0.22
SS18-212ENST00000579061 NGRNQ9NPE2 291 aaKnown RBP16.4■□□□□ 0.22
SS18-212ENST00000579061 CLDND1Q9NY35 253 aa16.4■□□□□ 0.22
SS18-212ENST00000579061 INPP5FQ9Y2H2 1132 aa16.4■□□□□ 0.22
SS18-212ENST00000579061 ACKR2O00590 384 aa16.39■□□□□ 0.21
SS18-212ENST00000579061 N4BP3O15049 544 aa16.39■□□□□ 0.21
SS18-212ENST00000579061 B4GALT5O43286 388 aa16.39■□□□□ 0.21
SS18-212ENST00000579061 ZC3H11AO75152 810 aaKnown RBP eCLIP16.39■□□□□ 0.21
SS18-212ENST00000579061 GUCY2CP25092 1073 aa16.39■□□□□ 0.21
SS18-212ENST00000579061 RNASELQ05823 741 aaKnown RBP16.39■□□□□ 0.21
SS18-212ENST00000579061 ADAM15Q13444 863 aa16.39■□□□□ 0.21
SS18-212ENST00000579061 LONRF3Q496Y0 759 aa16.39■□□□□ 0.21
SS18-212ENST00000579061 TMEM119Q4V9L6 283 aa16.39■□□□□ 0.21
SS18-212ENST00000579061 ADGRD2Q7Z7M1 963 aa16.39■□□□□ 0.21
SS18-212ENST00000579061 CABP7Q86V35 215 aa16.39■□□□□ 0.21
SS18-212ENST00000579061 SYT2Q8N9I0 419 aaPredicted RBP16.39■□□□□ 0.21
SS18-212ENST00000579061 MICAL1Q8TDZ2 1067 aa16.39■□□□□ 0.21
SS18-212ENST00000579061 DRC1Q96MC2 740 aa16.39■□□□□ 0.21
SS18-212ENST00000579061 UHRF1Q96T88 793 aaPredicted RBP16.39■□□□□ 0.21
SS18-212ENST00000579061 TMEM175Q9BSA9 504 aa16.39■□□□□ 0.21
SS18-212ENST00000579061 ZSCAN16Q9H4T2 348 aaPredicted RBP16.39■□□□□ 0.21
SS18-212ENST00000579061 KCND2Q9NZV8 630 aa16.39■□□□□ 0.21
SS18-212ENST00000579061 KCNG1Q9UIX4 513 aa16.39■□□□□ 0.21
SS18-212ENST00000579061 MTMR6Q9Y217 621 aa16.39■□□□□ 0.21
SS18-212ENST00000579061 GIT1Q9Y2X7 761 aa16.39■□□□□ 0.21
SS18-212ENST00000579061 PHLPP2Q6ZVD8 1323 aa16.39■□□□□ 0.21
SS18-212ENST00000579061 PRKCBP05771 671 aa16.38■□□□□ 0.21
SS18-212ENST00000579061 GALTP07902 379 aa16.38■□□□□ 0.21
SS18-212ENST00000579061 PDIA4P13667 645 aaKnown RBP16.38■□□□□ 0.21
SS18-212ENST00000579061 LTBRP36941 435 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms