RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 GTF2BQ00403 316 aa12.39□□□□□ -0.43
CDK5RAP3-210ENST00000578733 MBTD1Q05BQ5 628 aa12.39□□□□□ -0.43
CDK5RAP3-210ENST00000578733 PRPF4BQ13523 1007 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP3-210ENST00000578733 HSP90AA2PQ14568 343 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-210ENST00000578733 FAM187BQ17R55 369 aa12.39□□□□□ -0.43
CDK5RAP3-210ENST00000578733 L1TD1Q5T7N2 865 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP3-210ENST00000578733 ZNF658Q5TYW1 1059 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-210ENST00000578733 PPP4R3CPQ6ZMV5 832 aa12.39□□□□□ -0.43
CDK5RAP3-210ENST00000578733 RBM43Q6ZSC3 357 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP3-210ENST00000578733 ZNF720Q7Z2F6 126 aa12.39□□□□□ -0.43
CDK5RAP3-210ENST00000578733 MYOCDQ8IZQ8 938 aa12.39□□□□□ -0.43
CDK5RAP3-210ENST00000578733 SYCP3Q8IZU3 236 aa12.39□□□□□ -0.43
CDK5RAP3-210ENST00000578733 SEPT8Q92599 483 aa12.39□□□□□ -0.43
CDK5RAP3-210ENST00000578733 BICD1Q96G01 975 aa12.39□□□□□ -0.43
CDK5RAP3-210ENST00000578733 ZNF668Q96K58 619 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-210ENST00000578733 FTHL17Q9BXU8 183 aa12.39□□□□□ -0.43
CDK5RAP3-210ENST00000578733 MRPL4Q9BYD3 311 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP3-210ENST00000578733 RNF216Q9NWF9 866 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-210ENST00000578733 TBC1D7Q9P0N9 293 aa12.39□□□□□ -0.43
CDK5RAP3-210ENST00000578733 ACKR2O00590 384 aa12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 GHRP10912 638 aa12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 ACTN1P12814 892 aa12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 NMT1P30419 496 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 SARSP49591 514 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 FPGSQ05932 587 aa12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 EHHADHQ08426 723 aa12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 NFX1Q12986 1120 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 LPIN1Q14693 890 aa12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 ZPBP2Q6X784 338 aa12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 TMEM161BQ8NDZ6 487 aa12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 CCDC51Q96ER9 411 aa12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 SCLYQ96I15 445 aa12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 ADPGKQ9BRR6 497 aa12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 ANP32EQ9BTT0 268 aa12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 KIFC3Q9BVG8 833 aa12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 COL25A1Q9BXS0 654 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 IFIH1Q9BYX4 1025 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 FZD8Q9H461 694 aa12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 SLC39A2Q9NP94 309 aa12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 CHST12Q9NRB3 414 aa12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 MAN1B1Q9UKM7 699 aa12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 TBX20Q9UMR3 447 aa12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 NOC2LQ9Y3T9 749 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 TDRD15B5MCY1 1934 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 RALGAPA2Q2PPJ7 1873 aa12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 TRIP11Q15643 1979 aa12.38□□□□□ -0.43
CDK5RAP3-210ENST00000578733 ADGRA3Q8IWK6 1321 aa12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 TRIM43BA6NCK2 446 aa12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 HNRNPDLO14979 420 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 N4BP3O15049 544 aa12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 EFCAB14O75071 495 aa12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 MATR3P43243 847 aaKnown RBP eCLIP12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 LIG4P49917 911 aa12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 SNRPFP62306 86 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 COBLL1Q53SF7 1204 aa12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 NOTUMQ6P988 496 aa12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 TRAF7Q6Q0C0 670 aa12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 Q7L0L9 218 aa12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 HS2ST1Q7LGA3 356 aa12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 FAM228AQ86W67 206 aa12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 MAP4K3Q8IVH8 894 aa12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 GOLGA5Q8TBA6 731 aa12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 ZNF507Q8TCN5 953 aa12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 ERCC4Q92889 916 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 TRIM43Q96BQ3 446 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 TSG101Q99816 390 aa12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 CCDC113Q9H0I3 377 aa12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 WNT8AQ9H1J5 351 aa12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 CDHR5Q9HBB8 845 aa12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 TMEM63CQ9P1W3 806 aa12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 CGNQ9P2M7 1197 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 ZMYND8Q9ULU4 1186 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 PADI3Q9ULW8 664 aa12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 ST3GAL5Q9UNP4 418 aa12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 PIN4Q9Y237 131 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 PDCD11Q14690 1871 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 UMODL1Q5DID0 1318 aa12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 CNTNAP2Q9UHC6 1331 aa12.37□□□□□ -0.43
CDK5RAP3-210ENST00000578733 BIN1O00499 593 aa12.36□□□□□ -0.43
CDK5RAP3-210ENST00000578733 PSMA7O14818 248 aa12.36□□□□□ -0.43
CDK5RAP3-210ENST00000578733 PRPF6O94906 941 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-210ENST00000578733 CXCL10P02778 98 aa12.36□□□□□ -0.43
CDK5RAP3-210ENST00000578733 MYBP10242 640 aa12.36□□□□□ -0.43
CDK5RAP3-210ENST00000578733 SKIP12755 728 aa12.36□□□□□ -0.43
CDK5RAP3-210ENST00000578733 CD52P31358 61 aa12.36□□□□□ -0.43
CDK5RAP3-210ENST00000578733 MAGEA10P43363 369 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-210ENST00000578733 RAB27AP51159 221 aa12.36□□□□□ -0.43
CDK5RAP3-210ENST00000578733 NLRP12P59046 1061 aa12.36□□□□□ -0.43
CDK5RAP3-210ENST00000578733 STK4Q13043 487 aa12.36□□□□□ -0.43
CDK5RAP3-210ENST00000578733 MORC3Q14149 939 aa12.36□□□□□ -0.43
CDK5RAP3-210ENST00000578733 BMT2Q1RMZ1 405 aa12.36□□□□□ -0.43
CDK5RAP3-210ENST00000578733 ZC2HC1CQ53FD0 456 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-210ENST00000578733 PLEKHG4Q58EX7 1191 aa12.36□□□□□ -0.43
CDK5RAP3-210ENST00000578733 CT47A1Q5JQC4 288 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-210ENST00000578733 FAM109BQ6ICB4 259 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-210ENST00000578733 SLFN12LQ6IEE8 588 aa12.36□□□□□ -0.43
CDK5RAP3-210ENST00000578733 CNKSR3Q6P9H4 555 aa12.36□□□□□ -0.43
CDK5RAP3-210ENST00000578733 PSRC1Q6PGN9 363 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-210ENST00000578733 DEFB128Q7Z7B8 93 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms