RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 GRM5P41594 1212 aa8.86□□□□□ -0.99
COPS3-215ENST00000578317 ASIC1P78348 528 aa8.86□□□□□ -0.99
COPS3-215ENST00000578317 ADAM17P78536 824 aa8.86□□□□□ -0.99
COPS3-215ENST00000578317 MORC3Q14149 939 aa8.86□□□□□ -0.99
COPS3-215ENST00000578317 KIAA0753Q2KHM9 967 aa8.86□□□□□ -0.99
COPS3-215ENST00000578317 COBLL1Q53SF7 1204 aa8.86□□□□□ -0.99
COPS3-215ENST00000578317 PLA2G4FQ68DD2 849 aa8.86□□□□□ -0.99
COPS3-215ENST00000578317 SASS6Q6UVJ0 657 aa8.86□□□□□ -0.99
COPS3-215ENST00000578317 VASH1Q7L8A9 365 aaPredicted RBP8.86□□□□□ -0.99
COPS3-215ENST00000578317 DYMQ7RTS9 669 aa8.86□□□□□ -0.99
COPS3-215ENST00000578317 SESTD1Q86VW0 696 aa8.86□□□□□ -0.99
COPS3-215ENST00000578317 CCDC65Q8IXS2 484 aa8.86□□□□□ -0.99
COPS3-215ENST00000578317 DAW1Q8N136 415 aa8.86□□□□□ -0.99
COPS3-215ENST00000578317 KIFAP3Q92845 792 aa8.86□□□□□ -0.99
COPS3-215ENST00000578317 CCDC47Q96A33 483 aaKnown RBP8.86□□□□□ -0.99
COPS3-215ENST00000578317 DRC1Q96MC2 740 aa8.86□□□□□ -0.99
COPS3-215ENST00000578317 CCDC43Q96MW1 224 aaKnown RBP8.86□□□□□ -0.99
COPS3-215ENST00000578317 REEP2Q9BRK0 252 aa8.86□□□□□ -0.99
COPS3-215ENST00000578317 FUCA2Q9BTY2 467 aa8.86□□□□□ -0.99
COPS3-215ENST00000578317 OLFML3Q9NRN5 406 aa8.86□□□□□ -0.99
COPS3-215ENST00000578317 KIAA1217Q5T5P2 1943 aa8.86□□□□□ -0.99
COPS3-215ENST00000578317 MBLAC1A4D2B0 266 aaPredicted RBP8.85□□□□□ -0.99
COPS3-215ENST00000578317 DNM1LO00429 736 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 CAVIN2O95810 425 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 KRT18P05783 430 aaKnown RBP8.85□□□□□ -0.99
COPS3-215ENST00000578317 MYL3P08590 195 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 CCDC192P0DO97 292 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 MAPTP10636 758 aaKnown RBP8.85□□□□□ -0.99
COPS3-215ENST00000578317 GNAT1P11488 350 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 CASP1P29466 404 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 ARL2P36404 184 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 ACLYP53396 1101 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 NLRP12P59046 1061 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 PTPN11Q06124 597 aaPredicted RBP8.85□□□□□ -0.99
COPS3-215ENST00000578317 TBC1D8BQ0IIM8 1120 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 MAPK7Q13164 816 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 MTFR1Q15390 333 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 MTERF2Q49AM1 385 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 INTS6LQ5JSJ4 861 aaKnown RBP8.85□□□□□ -0.99
COPS3-215ENST00000578317 MARCH8Q5T0T0 291 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 ZNF658Q5TYW1 1059 aaPredicted RBP8.85□□□□□ -0.99
COPS3-215ENST00000578317 IER5Q5VY09 327 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 NFRKBQ6P4R8 1299 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 CXCL17Q6UXB2 119 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 MLKLQ8NB16 471 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 SLC17A8Q8NDX2 589 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 RNF208Q9H0X6 261 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 ATP6V0A4Q9HBG4 840 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 PARVGQ9HBI0 331 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 XPNPEP1Q9NQW7 623 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 PANK4Q9NVE7 773 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 ANO10Q9NW15 660 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 LARSQ9P2J5 1176 aaKnown RBP8.85□□□□□ -0.99
COPS3-215ENST00000578317 MAN1B1Q9UKM7 699 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 PCDHA2Q9Y5H9 948 aa8.85□□□□□ -0.99
COPS3-215ENST00000578317 NPHP3-ACAD11A0A0J9YXS1 232 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 SYCE3A1L190 88 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 ASAP2O43150 1006 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 SGPL1O95470 568 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 C22orf31O95567 290 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 SMIM10L2AP0DMW4 78 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 SMIM10L2BP0DMW5 78 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 PLS3P13797 630 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 IDEP14735 1019 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 BMP6P22004 513 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 KLRC1P26715 233 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 PPP1R2P41236 205 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 POLGP54098 1239 aaPredicted RBP8.84□□□□□ -0.99
COPS3-215ENST00000578317 CDC42EP1Q00587 391 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 POU5F1BQ06416 359 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 FOXC1Q12948 553 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 PPFIA1Q13136 1202 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 GRIK4Q16099 956 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 HERC4Q5GLZ8 1057 aaPredicted RBP8.84□□□□□ -0.99
COPS3-215ENST00000578317 LRSAM1Q6UWE0 723 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 TRMT1LQ7Z2T5 733 aaKnown RBP8.84□□□□□ -0.99
COPS3-215ENST00000578317 LINC01465Q8N7H1 131 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.84□□□□□ -0.99
COPS3-215ENST00000578317 TCP11Q8WWU5 503 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 ERCC4Q92889 916 aaPredicted RBP8.84□□□□□ -0.99
COPS3-215ENST00000578317 DEFB118Q96PH6 123 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 SH2D3AQ9BRG2 576 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 ST6GALNAC4Q9H4F1 302 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 PHF24Q9UPV7 400 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 MCM3APO60318 1980 aa8.84□□□□□ -0.99
COPS3-215ENST00000578317 ANKRD33BA6NCL7 494 aa8.83□□□□□ -1
COPS3-215ENST00000578317 ERVH48-1M5A8F1 160 aa8.83□□□□□ -1
COPS3-215ENST00000578317 USO1O60763 962 aaKnown RBP8.83□□□□□ -1
COPS3-215ENST00000578317 HIP1RO75146 1068 aa8.83□□□□□ -1
COPS3-215ENST00000578317 TBCAO75347 108 aaKnown RBP8.83□□□□□ -1
COPS3-215ENST00000578317 FAM13AO94988 1023 aa8.83□□□□□ -1
COPS3-215ENST00000578317 RPLP2P05387 115 aaKnown RBP8.83□□□□□ -1
COPS3-215ENST00000578317 TMOD1P28289 359 aa8.83□□□□□ -1
COPS3-215ENST00000578317 ABCD1P33897 745 aa8.83□□□□□ -1
COPS3-215ENST00000578317 SCTRP47872 440 aa8.83□□□□□ -1
COPS3-215ENST00000578317 DNM2P50570 870 aa8.83□□□□□ -1
COPS3-215ENST00000578317 TYRO3Q06418 890 aa8.83□□□□□ -1
COPS3-215ENST00000578317 STK4Q13043 487 aa8.83□□□□□ -1
COPS3-215ENST00000578317 COASYQ13057 564 aa8.83□□□□□ -1
COPS3-215ENST00000578317 MXD4Q14582 209 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms