RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 COL4A3BPQ9Y5P4 624 aa14.19□□□□□ -0.14
CCDC57-211ENST00000578187 CLIC4Q9Y696 253 aa14.19□□□□□ -0.14
CCDC57-211ENST00000578187 BDP1A6H8Y1 2624 aa14.19□□□□□ -0.14
CCDC57-211ENST00000578187 PLXNA4Q9HCM2 1894 aa14.18□□□□□ -0.14
CCDC57-211ENST00000578187 MYH11P35749 1972 aa14.18□□□□□ -0.14
CCDC57-211ENST00000578187 A0A087WWV3 80 aa14.18□□□□□ -0.14
CCDC57-211ENST00000578187 PRR33A8MZF0 331 aa14.18□□□□□ -0.14
CCDC57-211ENST00000578187 LINC01565O15544 149 aa14.18□□□□□ -0.14
CCDC57-211ENST00000578187 CDC25AP30304 524 aa14.18□□□□□ -0.14
CCDC57-211ENST00000578187 IRS1P35568 1242 aa14.18□□□□□ -0.14
CCDC57-211ENST00000578187 DLX2Q07687 328 aaPredicted RBP14.18□□□□□ -0.14
CCDC57-211ENST00000578187 ADGRD2Q7Z7M1 963 aa14.18□□□□□ -0.14
CCDC57-211ENST00000578187 ECHDC2Q86YB7 292 aa14.18□□□□□ -0.14
CCDC57-211ENST00000578187 RHPN2Q8IUC4 686 aa14.18□□□□□ -0.14
CCDC57-211ENST00000578187 TMEM143Q96AN5 459 aa14.18□□□□□ -0.14
CCDC57-211ENST00000578187 ZNF668Q96K58 619 aaPredicted RBP14.18□□□□□ -0.14
CCDC57-211ENST00000578187 AK8Q96MA6 479 aa14.18□□□□□ -0.14
CCDC57-211ENST00000578187 USP28Q96RU2 1077 aa14.18□□□□□ -0.14
CCDC57-211ENST00000578187 ENTPD7Q9NQZ7 604 aa14.18□□□□□ -0.14
CCDC57-211ENST00000578187 A0A087WZ62 844 aa14.17□□□□□ -0.14
CCDC57-211ENST00000578187 A0A0U1RQF3 1178 aa14.17□□□□□ -0.14
CCDC57-211ENST00000578187 FAM86C2PA6NEL3 165 aa14.17□□□□□ -0.14
CCDC57-211ENST00000578187 SLC26A4O43511 780 aa14.17□□□□□ -0.14
CCDC57-211ENST00000578187 USO1O60763 962 aaKnown RBP14.17□□□□□ -0.14
CCDC57-211ENST00000578187 F13A1P00488 732 aa14.17□□□□□ -0.14
CCDC57-211ENST00000578187 ZSCAN22P10073 491 aaPredicted RBP14.17□□□□□ -0.14
CCDC57-211ENST00000578187 PLA2G5P39877 138 aa14.17□□□□□ -0.14
CCDC57-211ENST00000578187 PLCB3Q01970 1234 aa14.17□□□□□ -0.14
CCDC57-211ENST00000578187 GRIN1Q05586 938 aa14.17□□□□□ -0.14
CCDC57-211ENST00000578187 COASYQ13057 564 aa14.17□□□□□ -0.14
CCDC57-211ENST00000578187 PKP1Q13835 747 aa14.17□□□□□ -0.14
CCDC57-211ENST00000578187 KSR1Q8IVT5 923 aa14.17□□□□□ -0.14
CCDC57-211ENST00000578187 SPRYD3Q8NCJ5 442 aa14.17□□□□□ -0.14
CCDC57-211ENST00000578187 MCPH1Q8NEM0 835 aa14.17□□□□□ -0.14
CCDC57-211ENST00000578187 PRPF31Q8WWY3 499 aaKnown RBP14.17□□□□□ -0.14
CCDC57-211ENST00000578187 MRPS27Q92552 414 aaKnown RBP14.17□□□□□ -0.14
CCDC57-211ENST00000578187 KHSRPQ92945 711 aaKnown RBP eCLIP14.17□□□□□ -0.14
CCDC57-211ENST00000578187 PNMA5Q96PV4 448 aa14.17□□□□□ -0.14
CCDC57-211ENST00000578187 FDXACB1Q9BRP7 624 aaPredicted RBP14.17□□□□□ -0.14
CCDC57-211ENST00000578187 CWH43Q9H720 699 aa14.17□□□□□ -0.14
CCDC57-211ENST00000578187 IFT122Q9HBG6 1241 aa14.17□□□□□ -0.14
CCDC57-211ENST00000578187 NGRNQ9NPE2 291 aaKnown RBP14.17□□□□□ -0.14
CCDC57-211ENST00000578187 DDX19AQ9NUU7 478 aaKnown RBP14.17□□□□□ -0.14
CCDC57-211ENST00000578187 RAPGEFL1Q9UHV5 662 aa14.17□□□□□ -0.14
CCDC57-211ENST00000578187 KIAA1024Q9UPX6 916 aa14.17□□□□□ -0.14
CCDC57-211ENST00000578187 ARHGEF35A5YM69 484 aa14.16□□□□□ -0.14
CCDC57-211ENST00000578187 C19orf67A6NJJ6 358 aa14.16□□□□□ -0.14
CCDC57-211ENST00000578187 ASAP2O43150 1006 aa14.16□□□□□ -0.14
CCDC57-211ENST00000578187 EYA4O95677 639 aa14.16□□□□□ -0.14
CCDC57-211ENST00000578187 ARL2P36404 184 aa14.16□□□□□ -0.14
CCDC57-211ENST00000578187 LONP1P36776 959 aaKnown RBP14.16□□□□□ -0.14
CCDC57-211ENST00000578187 NASPP49321 788 aaPredicted RBP14.16□□□□□ -0.14
CCDC57-211ENST00000578187 ALDH7A1P49419 539 aaKnown RBP14.16□□□□□ -0.14
CCDC57-211ENST00000578187 RAB27AP51159 221 aa14.16□□□□□ -0.14
CCDC57-211ENST00000578187 LAMTOR4Q0VGL1 99 aa14.16□□□□□ -0.14
CCDC57-211ENST00000578187 BECN1Q14457 450 aa14.16□□□□□ -0.14
CCDC57-211ENST00000578187 MXD4Q14582 209 aaPredicted RBP14.16□□□□□ -0.14
CCDC57-211ENST00000578187 TWF2Q6IBS0 349 aaKnown RBP14.16□□□□□ -0.14
CCDC57-211ENST00000578187 PADI6Q6TGC4 694 aa14.16□□□□□ -0.14
CCDC57-211ENST00000578187 KCNT2Q6UVM3 1135 aa14.16□□□□□ -0.14
CCDC57-211ENST00000578187 KCNK18Q7Z418 384 aa14.16□□□□□ -0.14
CCDC57-211ENST00000578187 KCTD17Q8N5Z5 321 aa14.16□□□□□ -0.14
CCDC57-211ENST00000578187 TMEM87AQ8NBN3 555 aa14.16□□□□□ -0.14
CCDC57-211ENST00000578187 SMRP1Q8NCR6 262 aa14.16□□□□□ -0.14
CCDC57-211ENST00000578187 MSLNLQ96KJ4 702 aa14.16□□□□□ -0.14
CCDC57-211ENST00000578187 NLRP4Q96MN2 994 aa14.16□□□□□ -0.14
CCDC57-211ENST00000578187 CASD1Q96PB1 797 aa14.16□□□□□ -0.14
CCDC57-211ENST00000578187 TCF25Q9BQ70 676 aa14.16□□□□□ -0.14
CCDC57-211ENST00000578187 NT5C3AQ9H0P0 336 aa14.16□□□□□ -0.14
CCDC57-211ENST00000578187 BHMT2Q9H2M3 363 aa14.16□□□□□ -0.14
CCDC57-211ENST00000578187 SPG21Q9NZD8 308 aa14.16□□□□□ -0.14
CCDC57-211ENST00000578187 FBXO2Q9UK22 296 aaPredicted RBP14.16□□□□□ -0.14
CCDC57-211ENST00000578187 PIN4Q9Y237 131 aaKnown RBP14.16□□□□□ -0.14
CCDC57-211ENST00000578187 CYP11B2P19099 503 aa14.15□□□□□ -0.14
CCDC57-211ENST00000578187 FGFR4P22455 802 aa14.15□□□□□ -0.14
CCDC57-211ENST00000578187 SLC39A14Q15043 492 aa14.15□□□□□ -0.14
CCDC57-211ENST00000578187 TMEM119Q4V9L6 283 aa14.15□□□□□ -0.14
CCDC57-211ENST00000578187 PLPP4Q5VZY2 271 aa14.15□□□□□ -0.14
CCDC57-211ENST00000578187 CATSPER4Q7RTX7 472 aa14.15□□□□□ -0.14
CCDC57-211ENST00000578187 TMC7Q7Z402 723 aa14.15□□□□□ -0.14
CCDC57-211ENST00000578187 CABP7Q86V35 215 aa14.15□□□□□ -0.14
CCDC57-211ENST00000578187 HELQQ8TDG4 1101 aa14.15□□□□□ -0.14
CCDC57-211ENST00000578187 ASAP3Q8TDY4 903 aa14.15□□□□□ -0.14
CCDC57-211ENST00000578187 POLR3FQ9H1D9 316 aaPredicted RBP14.15□□□□□ -0.14
CCDC57-211ENST00000578187 BARX2Q9UMQ3 279 aaPredicted RBP14.15□□□□□ -0.14
CCDC57-211ENST00000578187 DNM3Q9UQ16 869 aa14.15□□□□□ -0.14
CCDC57-211ENST00000578187 SRPRBQ9Y5M8 271 aaKnown RBP14.15□□□□□ -0.14
CCDC57-211ENST00000578187 TCHHQ07283 1943 aa14.15□□□□□ -0.14
CCDC57-211ENST00000578187 E9PMD0 336 aa14.14□□□□□ -0.15
CCDC57-211ENST00000578187 PER2O15055 1255 aa14.14□□□□□ -0.15
CCDC57-211ENST00000578187 BRD1O95696 1058 aa14.14□□□□□ -0.15
CCDC57-211ENST00000578187 GLRA2P23416 452 aa14.14□□□□□ -0.15
CCDC57-211ENST00000578187 MARCKSP29966 332 aaPredicted RBP14.14□□□□□ -0.15
CCDC57-211ENST00000578187 CA8P35219 290 aa14.14□□□□□ -0.15
CCDC57-211ENST00000578187 PHKA2P46019 1235 aa14.14□□□□□ -0.15
CCDC57-211ENST00000578187 PTENP60484 403 aa14.14□□□□□ -0.15
CCDC57-211ENST00000578187 ERVFC1P60507 584 aa14.14□□□□□ -0.15
CCDC57-211ENST00000578187 POU5F1BQ06416 359 aa14.14□□□□□ -0.15
CCDC57-211ENST00000578187 CAPSQ13938 189 aa14.14□□□□□ -0.15
CCDC57-211ENST00000578187 TFDP1Q14186 410 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms