RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 POMGNT1Q8WZA1 660 aa20.27■□□□□ 0.84
PRKCA-203ENST00000578063 ZBTB10Q96DT7 871 aa20.27■□□□□ 0.84
PRKCA-203ENST00000578063 NLRP4Q96MN2 994 aa20.27■□□□□ 0.84
PRKCA-203ENST00000578063 NUP58Q9BVL2 599 aa20.27■□□□□ 0.84
PRKCA-203ENST00000578063 CCDC113Q9H0I3 377 aa20.27■□□□□ 0.84
PRKCA-203ENST00000578063 PCIF1Q9H4Z3 704 aa20.27■□□□□ 0.84
PRKCA-203ENST00000578063 SETD4Q9NVD3 440 aa20.27■□□□□ 0.84
PRKCA-203ENST00000578063 AKR1B15C9JRZ8 316 aaPredicted RBP20.27■□□□□ 0.83
PRKCA-203ENST00000578063 CCND3P30281 292 aaPredicted RBP20.27■□□□□ 0.83
PRKCA-203ENST00000578063 PHKA2P46019 1235 aa20.27■□□□□ 0.83
PRKCA-203ENST00000578063 KCNH2Q12809 1159 aa20.27■□□□□ 0.83
PRKCA-203ENST00000578063 MAPK6Q16659 721 aa20.27■□□□□ 0.83
PRKCA-203ENST00000578063 DCAF17Q5H9S7 520 aaPredicted RBP20.27■□□□□ 0.83
PRKCA-203ENST00000578063 GNASQ5JWF2 1037 aa20.27■□□□□ 0.83
PRKCA-203ENST00000578063 SLFN12LQ6IEE8 588 aa20.27■□□□□ 0.83
PRKCA-203ENST00000578063 ZPBP2Q6X784 338 aa20.27■□□□□ 0.83
PRKCA-203ENST00000578063 CNGA4Q8IV77 575 aa20.27■□□□□ 0.83
PRKCA-203ENST00000578063 SLAIN1Q8ND83 568 aa20.27■□□□□ 0.83
PRKCA-203ENST00000578063 SLC35C1Q96A29 364 aa20.27■□□□□ 0.83
PRKCA-203ENST00000578063 MTG1Q9BT17 334 aaPredicted RBP20.27■□□□□ 0.83
PRKCA-203ENST00000578063 XPNPEP3Q9NQH7 507 aa20.27■□□□□ 0.83
PRKCA-203ENST00000578063 AKT3Q9Y243 479 aa20.27■□□□□ 0.83
PRKCA-203ENST00000578063 STYXL1Q9Y6J8 313 aa20.27■□□□□ 0.83
PRKCA-203ENST00000578063 MYADML2A6NDP7 307 aa20.26■□□□□ 0.83
PRKCA-203ENST00000578063 GYPCP04921 128 aa20.26■□□□□ 0.83
PRKCA-203ENST00000578063 KRT13P13646 458 aa20.26■□□□□ 0.83
PRKCA-203ENST00000578063 PTENP60484 403 aa20.26■□□□□ 0.83
PRKCA-203ENST00000578063 FIGNQ5HY92 759 aa20.26■□□□□ 0.83
PRKCA-203ENST00000578063 TCERG1LQ5VWI1 586 aa20.26■□□□□ 0.83
PRKCA-203ENST00000578063 NFRKBQ6P4R8 1299 aa20.26■□□□□ 0.83
PRKCA-203ENST00000578063 CCDC112Q8NEF3 446 aa20.26■□□□□ 0.83
PRKCA-203ENST00000578063 PCMTD1Q96MG8 357 aaPredicted RBP20.26■□□□□ 0.83
PRKCA-203ENST00000578063 MRPL4Q9BYD3 311 aaKnown RBP20.26■□□□□ 0.83
PRKCA-203ENST00000578063 MBLAC1A4D2B0 266 aaPredicted RBP20.25■□□□□ 0.83
PRKCA-203ENST00000578063 ADAMTS4O75173 837 aa20.25■□□□□ 0.83
PRKCA-203ENST00000578063 PRKCBP05771 671 aa20.25■□□□□ 0.83
PRKCA-203ENST00000578063 GJB1P08034 283 aa20.25■□□□□ 0.83
PRKCA-203ENST00000578063 CHMP4BP1P59074 171 aa20.25■□□□□ 0.83
PRKCA-203ENST00000578063 RBL2Q08999 1139 aa20.25■□□□□ 0.83
PRKCA-203ENST00000578063 LRMPQ12912 555 aa20.25■□□□□ 0.83
PRKCA-203ENST00000578063 BFSP1Q12934 665 aa20.25■□□□□ 0.83
PRKCA-203ENST00000578063 IFNLR1Q8IU57 520 aaPredicted RBP20.25■□□□□ 0.83
PRKCA-203ENST00000578063 FBXL18Q96ME1 805 aa20.25■□□□□ 0.83
PRKCA-203ENST00000578063 SIK3Q9Y2K2 1263 aa20.25■□□□□ 0.83
PRKCA-203ENST00000578063 MSCO60682 206 aa20.24■□□□□ 0.83
PRKCA-203ENST00000578063 MFAP3LO75121 409 aa20.24■□□□□ 0.83
PRKCA-203ENST00000578063 PGK1P00558 417 aa20.24■□□□□ 0.83
PRKCA-203ENST00000578063 GNAT1P11488 350 aa20.24■□□□□ 0.83
PRKCA-203ENST00000578063 TRIM21P19474 475 aaKnown RBP20.24■□□□□ 0.83
PRKCA-203ENST00000578063 MSNP26038 577 aaKnown RBP20.24■□□□□ 0.83
PRKCA-203ENST00000578063 CDC42EP1Q00587 391 aa20.24■□□□□ 0.83
PRKCA-203ENST00000578063 GPD1LQ8N335 351 aa20.24■□□□□ 0.83
PRKCA-203ENST00000578063 TC2NQ8N9U0 490 aa20.24■□□□□ 0.83
PRKCA-203ENST00000578063 CCDC51Q96ER9 411 aa20.24■□□□□ 0.83
PRKCA-203ENST00000578063 TARS2Q9BW92 718 aaKnown RBP20.24■□□□□ 0.83
PRKCA-203ENST00000578063 KIAA1586Q9HCI6 787 aa20.24■□□□□ 0.83
PRKCA-203ENST00000578063 TSKSQ9UJT2 592 aa20.24■□□□□ 0.83
PRKCA-203ENST00000578063 SMIM35A0A1B0GVV1 85 aa20.24■□□□□ 0.83
PRKCA-203ENST00000578063 ESPNB1AK53 854 aa20.24■□□□□ 0.83
PRKCA-203ENST00000578063 CST5P28325 142 aaPredicted RBP20.24■□□□□ 0.83
PRKCA-203ENST00000578063 CASP14P31944 242 aa20.24■□□□□ 0.83
PRKCA-203ENST00000578063 SNRNP35Q16560 246 aaKnown RBP20.24■□□□□ 0.83
PRKCA-203ENST00000578063 ZNF410Q86VK4 478 aa20.24■□□□□ 0.83
PRKCA-203ENST00000578063 KIAA0319LQ8IZA0 1049 aa20.24■□□□□ 0.83
PRKCA-203ENST00000578063 FZD8Q9H461 694 aa20.24■□□□□ 0.83
PRKCA-203ENST00000578063 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.24■□□□□ 0.83
PRKCA-203ENST00000578063 DDX20Q9UHI6 824 aaKnown RBP20.24■□□□□ 0.83
PRKCA-203ENST00000578063 C17orf102A2RUQ5 167 aa20.23■□□□□ 0.83
PRKCA-203ENST00000578063 GTPBP10A4D1E9 387 aaKnown RBP20.23■□□□□ 0.83
PRKCA-203ENST00000578063 INO80B-WBP1J3KQ70 363 aa20.23■□□□□ 0.83
PRKCA-203ENST00000578063 ACKR2O00590 384 aa20.23■□□□□ 0.83
PRKCA-203ENST00000578063 HOXC8P31273 242 aa20.23■□□□□ 0.83
PRKCA-203ENST00000578063 MCCD1P59942 119 aaPredicted RBP20.23■□□□□ 0.83
PRKCA-203ENST00000578063 ADAM17P78536 824 aa20.23■□□□□ 0.83
PRKCA-203ENST00000578063 CCZ1BP86790 482 aa20.23■□□□□ 0.83
PRKCA-203ENST00000578063 CCZ1P86791 482 aaPredicted RBP20.23■□□□□ 0.83
PRKCA-203ENST00000578063 MBTD1Q05BQ5 628 aa20.23■□□□□ 0.83
PRKCA-203ENST00000578063 ENPEPQ07075 957 aa20.23■□□□□ 0.83
PRKCA-203ENST00000578063 USP37Q86T82 979 aa20.23■□□□□ 0.83
PRKCA-203ENST00000578063 C7orf31Q8N865 590 aa20.23■□□□□ 0.83
PRKCA-203ENST00000578063 RDH13Q8NBN7 331 aa20.23■□□□□ 0.83
PRKCA-203ENST00000578063 SAAL1Q96ER3 474 aa20.23■□□□□ 0.83
PRKCA-203ENST00000578063 PANX2Q96RD6 677 aa20.23■□□□□ 0.83
PRKCA-203ENST00000578063 INO80BQ9C086 356 aaPredicted RBP20.23■□□□□ 0.83
PRKCA-203ENST00000578063 TTYH3Q9C0H2 523 aa20.23■□□□□ 0.83
PRKCA-203ENST00000578063 IFT122Q9HBG6 1241 aa20.23■□□□□ 0.83
PRKCA-203ENST00000578063 PRMT7Q9NVM4 692 aaPredicted RBP20.23■□□□□ 0.83
PRKCA-203ENST00000578063 A0A1W2PQJ5 194 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 EXTL3O43909 919 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 TOM1L1O75674 476 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 LDHAP00338 332 aaKnown RBP20.22■□□□□ 0.83
PRKCA-203ENST00000578063 VTNP04004 478 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 FXR1P51114 621 aaKnown RBP eCLIP20.22■□□□□ 0.83
PRKCA-203ENST00000578063 VAMP7P51809 220 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 ADKP55263 362 aaKnown RBP20.22■□□□□ 0.83
PRKCA-203ENST00000578063 FAM187BQ17R55 369 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 KLHDC9Q8NEP7 349 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 CPLX3Q8WVH0 158 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 CAPN11Q9UMQ6 739 aa20.22■□□□□ 0.83
PRKCA-203ENST00000578063 GOLGA8IPA6NC78 632 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms