RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 TMEM169Q96HH4 297 aa17.85■□□□□ 0.45
VAPA-204ENST00000577901 INTS4Q96HW7 963 aaKnown RBP17.85■□□□□ 0.45
VAPA-204ENST00000577901 NECTIN4Q96NY8 510 aa17.85■□□□□ 0.45
VAPA-204ENST00000577901 TMEM60Q9H2L4 133 aa17.85■□□□□ 0.45
VAPA-204ENST00000577901 POMKQ9H5K3 350 aa17.85■□□□□ 0.45
VAPA-204ENST00000577901 ZSWIM4Q9H7M6 989 aa17.85■□□□□ 0.45
VAPA-204ENST00000577901 A0A087WZ62 844 aa17.84■□□□□ 0.45
VAPA-204ENST00000577901 TMEM150BA6NC51 233 aa17.84■□□□□ 0.45
VAPA-204ENST00000577901 STBD1O95210 358 aa17.84■□□□□ 0.45
VAPA-204ENST00000577901 AVPR2P30518 371 aa17.84■□□□□ 0.45
VAPA-204ENST00000577901 PHKA2P46019 1235 aa17.84■□□□□ 0.45
VAPA-204ENST00000577901 DNM2P50570 870 aa17.84■□□□□ 0.45
VAPA-204ENST00000577901 RILPL1Q5EBL4 403 aa17.84■□□□□ 0.45
VAPA-204ENST00000577901 OTUD6AQ7L8S5 288 aa17.84■□□□□ 0.45
VAPA-204ENST00000577901 C4orf19Q8IY42 314 aa17.84■□□□□ 0.45
VAPA-204ENST00000577901 DYDC2Q96IM9 177 aa17.84■□□□□ 0.45
VAPA-204ENST00000577901 RIPOR3Q96MK2 946 aa17.84■□□□□ 0.45
VAPA-204ENST00000577901 CEP89Q96ST8 783 aa17.84■□□□□ 0.45
VAPA-204ENST00000577901 FDXACB1Q9BRP7 624 aaPredicted RBP17.84■□□□□ 0.45
VAPA-204ENST00000577901 TRAIPQ9BWF2 469 aa17.84■□□□□ 0.45
VAPA-204ENST00000577901 IGKV6-21A0A0C4DH24 114 aa17.83■□□□□ 0.44
VAPA-204ENST00000577901 C2CD4DB7Z1M9 353 aa17.83■□□□□ 0.44
VAPA-204ENST00000577901 ZC3H11AO75152 810 aaKnown RBP eCLIP17.83■□□□□ 0.44
VAPA-204ENST00000577901 SKIP12755 728 aa17.83■□□□□ 0.44
VAPA-204ENST00000577901 SFPQP23246 707 aaKnown RBP eCLIP17.83■□□□□ 0.448e-6■■■■□ 25.1
VAPA-204ENST00000577901 MTHFRP42898 656 aa17.83■□□□□ 0.44
VAPA-204ENST00000577901 TOB1P50616 345 aaPredicted RBP17.83■□□□□ 0.44
VAPA-204ENST00000577901 TWF2Q6IBS0 349 aaKnown RBP17.83■□□□□ 0.44
VAPA-204ENST00000577901 ANO5Q75V66 913 aa17.83■□□□□ 0.44
VAPA-204ENST00000577901 TPH2Q8IWU9 490 aa17.83■□□□□ 0.44
VAPA-204ENST00000577901 EXOC8Q8IYI6 725 aa17.83■□□□□ 0.44
VAPA-204ENST00000577901 VPS52Q8N1B4 723 aa17.83■□□□□ 0.44
VAPA-204ENST00000577901 TMEM87AQ8NBN3 555 aa17.83■□□□□ 0.44
VAPA-204ENST00000577901 AUTS2Q8WXX7 1259 aa17.83■□□□□ 0.44
VAPA-204ENST00000577901 RSPH1Q8WYR4 309 aa17.83■□□□□ 0.44
VAPA-204ENST00000577901 LPPQ93052 612 aa17.83■□□□□ 0.44
VAPA-204ENST00000577901 EIF2AK1Q9BQI3 630 aaKnown RBP17.83■□□□□ 0.44
VAPA-204ENST00000577901 JPH2Q9BR39 696 aaPredicted RBP17.83■□□□□ 0.44
VAPA-204ENST00000577901 SH2D3AQ9BRG2 576 aa17.83■□□□□ 0.44
VAPA-204ENST00000577901 LXNQ9BS40 222 aa17.83■□□□□ 0.44
VAPA-204ENST00000577901 ZBP1Q9H171 429 aa17.83■□□□□ 0.44
VAPA-204ENST00000577901 RGL1Q9NZL6 768 aa17.83■□□□□ 0.44
VAPA-204ENST00000577901 SUCLA2Q9P2R7 463 aaPredicted RBP17.83■□□□□ 0.44
VAPA-204ENST00000577901 SORCS3Q9UPU3 1222 aa17.83■□□□□ 0.44
VAPA-204ENST00000577901 PPME1Q9Y570 386 aa17.83■□□□□ 0.44
VAPA-204ENST00000577901 WDR81Q562E7 1941 aa17.82■□□□□ 0.44
VAPA-204ENST00000577901 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.82■□□□□ 0.44
VAPA-204ENST00000577901 SLITRK3O94933 977 aa17.82■□□□□ 0.44
VAPA-204ENST00000577901 PDGFBP01127 241 aaPredicted RBP17.82■□□□□ 0.44
VAPA-204ENST00000577901 WEE2P0C1S8 567 aa17.82■□□□□ 0.44
VAPA-204ENST00000577901 YWHABP31946 246 aaKnown RBP17.82■□□□□ 0.44
VAPA-204ENST00000577901 POLGP54098 1239 aaPredicted RBP17.82■□□□□ 0.44
VAPA-204ENST00000577901 CYP4A11Q02928 519 aa17.82■□□□□ 0.44
VAPA-204ENST00000577901 MTMR3Q13615 1198 aa17.82■□□□□ 0.44
VAPA-204ENST00000577901 CTTNQ14247 550 aaKnown RBP17.82■□□□□ 0.44
VAPA-204ENST00000577901 LONRF3Q496Y0 759 aa17.82■□□□□ 0.44
VAPA-204ENST00000577901 RARS2Q5T160 578 aaKnown RBP17.82■□□□□ 0.44
VAPA-204ENST00000577901 GLB1LQ6UWU2 654 aa17.82■□□□□ 0.44
VAPA-204ENST00000577901 ZNF410Q86VK4 478 aa17.82■□□□□ 0.44
VAPA-204ENST00000577901 TMEM173Q86WV6 379 aaPredicted RBP17.82■□□□□ 0.44
VAPA-204ENST00000577901 RHPN2Q8IUC4 686 aa17.82■□□□□ 0.44
VAPA-204ENST00000577901 HSCBQ8IWL3 235 aa17.82■□□□□ 0.44
VAPA-204ENST00000577901 UBALD2Q8IYN6 164 aa17.82■□□□□ 0.44
VAPA-204ENST00000577901 C12orf76Q8N812 135 aaPredicted RBP17.82■□□□□ 0.44
VAPA-204ENST00000577901 CEP170P1Q96L14 293 aa17.82■□□□□ 0.44
VAPA-204ENST00000577901 HSD17B14Q9BPX1 270 aa17.82■□□□□ 0.44
VAPA-204ENST00000577901 INO80BQ9C086 356 aaPredicted RBP17.82■□□□□ 0.44
VAPA-204ENST00000577901 IRF2BPLQ9H1B7 796 aa17.82■□□□□ 0.44
VAPA-204ENST00000577901 FAM86C1Q9NVL1 165 aa17.82■□□□□ 0.44
VAPA-204ENST00000577901 DZANK1Q9NVP4 752 aa17.82■□□□□ 0.44
VAPA-204ENST00000577901 PIN4Q9Y237 131 aaKnown RBP17.82■□□□□ 0.44
VAPA-204ENST00000577901 MYO15AQ9UKN7 3530 aa17.82■□□□□ 0.44
VAPA-204ENST00000577901 CARNS1A5YM72 827 aa17.81■□□□□ 0.44
VAPA-204ENST00000577901 LAD1O00515 517 aa17.81■□□□□ 0.44
VAPA-204ENST00000577901 MAFO75444 373 aaPredicted RBP17.81■□□□□ 0.44
VAPA-204ENST00000577901 CTSAP10619 480 aa17.81■□□□□ 0.44
VAPA-204ENST00000577901 PTGDRQ13258 359 aa17.81■□□□□ 0.44
VAPA-204ENST00000577901 GIT2Q14161 759 aa17.81■□□□□ 0.44
VAPA-204ENST00000577901 NBR1Q14596 966 aa17.81■□□□□ 0.44
VAPA-204ENST00000577901 NOMO2Q5JPE7 1267 aa17.81■□□□□ 0.44
VAPA-204ENST00000577901 DDX53Q86TM3 631 aaKnown RBP17.81■□□□□ 0.44
VAPA-204ENST00000577901 KSR1Q8IVT5 923 aa17.81■□□□□ 0.44
VAPA-204ENST00000577901 ERMNQ8TAM6 284 aa17.81■□□□□ 0.44
VAPA-204ENST00000577901 IGSF21Q96ID5 467 aa17.81■□□□□ 0.44
VAPA-204ENST00000577901 RAB34Q9BZG1 259 aa17.81■□□□□ 0.44
VAPA-204ENST00000577901 NRDE2Q9H7Z3 1164 aa17.81■□□□□ 0.44
VAPA-204ENST00000577901 CYP26B1Q9NR63 512 aa17.81■□□□□ 0.44
VAPA-204ENST00000577901 FAM105AQ9NUU6 356 aa17.81■□□□□ 0.44
VAPA-204ENST00000577901 TBC1D13Q9NVG8 400 aa17.81■□□□□ 0.44
VAPA-204ENST00000577901 WRAP73Q9P2S5 460 aaPredicted RBP17.81■□□□□ 0.44
VAPA-204ENST00000577901 INPP5FQ9Y2H2 1132 aa17.81■□□□□ 0.44
VAPA-204ENST00000577901 PCDHB6Q9Y5E3 794 aa17.81■□□□□ 0.44
VAPA-204ENST00000577901 IRAK3Q9Y616 596 aa17.81■□□□□ 0.44
VAPA-204ENST00000577901 POTEMA6NI47 508 aa17.8■□□□□ 0.44
VAPA-204ENST00000577901 BRD1O95696 1058 aa17.8■□□□□ 0.44
VAPA-204ENST00000577901 GALTP07902 379 aa17.8■□□□□ 0.44
VAPA-204ENST00000577901 EPCAMP16422 314 aa17.8■□□□□ 0.44
VAPA-204ENST00000577901 NUBP1P53384 320 aa17.8■□□□□ 0.44
VAPA-204ENST00000577901 RNASELQ05823 741 aaKnown RBP17.8■□□□□ 0.44
VAPA-204ENST00000577901 ATAT1Q5SQI0 421 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms