RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 ATP2A2P16615 1042 aaKnown RBP13.63□□□□□ -0.23
RARA-208ENST00000577646 SARSP49591 514 aaKnown RBP13.63□□□□□ -0.23
RARA-208ENST00000577646 STRN3Q13033 797 aa13.63□□□□□ -0.23
RARA-208ENST00000577646 PSMD2Q13200 908 aa13.63□□□□□ -0.23
RARA-208ENST00000577646 LONRF3Q496Y0 759 aa13.63□□□□□ -0.23
RARA-208ENST00000577646 KRBA2Q6ZNG9 492 aa13.63□□□□□ -0.23
RARA-208ENST00000577646 FAM178BQ8IXR5 827 aa13.63□□□□□ -0.23
RARA-208ENST00000577646 HACE1Q8IYU2 909 aa13.63□□□□□ -0.23
RARA-208ENST00000577646 TMEM161BQ8NDZ6 487 aa13.63□□□□□ -0.23
RARA-208ENST00000577646 ENGASEQ8NFI3 743 aa13.63□□□□□ -0.23
RARA-208ENST00000577646 BSNDQ8WZ55 320 aa13.63□□□□□ -0.23
RARA-208ENST00000577646 TOP1MTQ969P6 601 aa13.63□□□□□ -0.23
RARA-208ENST00000577646 PPP1R16BQ96T49 567 aa13.63□□□□□ -0.23
RARA-208ENST00000577646 ADAM2Q99965 735 aa13.63□□□□□ -0.23
RARA-208ENST00000577646 CCDC113Q9H0I3 377 aa13.63□□□□□ -0.23
RARA-208ENST00000577646 TMX1Q9H3N1 280 aa13.63□□□□□ -0.23
RARA-208ENST00000577646 PANK4Q9NVE7 773 aa13.63□□□□□ -0.23
RARA-208ENST00000577646 SERTAD1Q9UHV2 236 aa13.63□□□□□ -0.23
RARA-208ENST00000577646 PCDHB13Q9Y5F0 798 aa13.63□□□□□ -0.23
RARA-208ENST00000577646 SCN5AQ14524 2016 aa13.63□□□□□ -0.23
RARA-208ENST00000577646 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.62□□□□□ -0.23
RARA-208ENST00000577646 SFI1A8K8P3 1242 aa13.62□□□□□ -0.23
RARA-208ENST00000577646 C9IYK1 514 aa13.62□□□□□ -0.23
RARA-208ENST00000577646 N4BP3O15049 544 aa13.62□□□□□ -0.23
RARA-208ENST00000577646 GTPBP6O43824 516 aaPredicted RBP13.62□□□□□ -0.23
RARA-208ENST00000577646 HOXA11P31270 313 aaPredicted RBP13.62□□□□□ -0.23
RARA-208ENST00000577646 GTF2BQ00403 316 aa13.62□□□□□ -0.23
RARA-208ENST00000577646 RAD51AP2Q09MP3 1159 aa13.62□□□□□ -0.23
RARA-208ENST00000577646 PRPF4BQ13523 1007 aaKnown RBP13.62□□□□□ -0.23
RARA-208ENST00000577646 RAB30Q15771 203 aa13.62□□□□□ -0.23
RARA-208ENST00000577646 AMHR2Q16671 573 aa13.62□□□□□ -0.23
RARA-208ENST00000577646 HERC4Q5GLZ8 1057 aaPredicted RBP13.62□□□□□ -0.23
RARA-208ENST00000577646 ZPBP2Q6X784 338 aa13.62□□□□□ -0.23
RARA-208ENST00000577646 UNC13DQ70J99 1090 aa13.62□□□□□ -0.23
RARA-208ENST00000577646 DYMQ7RTS9 669 aa13.62□□□□□ -0.23
RARA-208ENST00000577646 ZNF720Q7Z2F6 126 aa13.62□□□□□ -0.23
RARA-208ENST00000577646 HAUS6Q7Z4H7 955 aa13.62□□□□□ -0.23
RARA-208ENST00000577646 RTN4RL1Q86UN2 441 aaPredicted RBP13.62□□□□□ -0.23
RARA-208ENST00000577646 NPAS4Q8IUM7 802 aa13.62□□□□□ -0.23
RARA-208ENST00000577646 PGBD4Q96DM1 585 aa13.62□□□□□ -0.23
RARA-208ENST00000577646 PAGE5Q96GU1 130 aa13.62□□□□□ -0.23
RARA-208ENST00000577646 MRPL4Q9BYD3 311 aaKnown RBP13.62□□□□□ -0.23
RARA-208ENST00000577646 OSBPL7Q9BZF2 842 aa13.62□□□□□ -0.23
RARA-208ENST00000577646 MINDY3Q9H8M7 445 aa13.62□□□□□ -0.23
RARA-208ENST00000577646 UBN1Q9NPG3 1134 aa13.62□□□□□ -0.23
RARA-208ENST00000577646 TMEM161AQ9NX61 479 aa13.62□□□□□ -0.23
RARA-208ENST00000577646 MTMR10Q9NXD2 777 aa13.62□□□□□ -0.23
RARA-208ENST00000577646 PIN4Q9Y237 131 aaKnown RBP13.62□□□□□ -0.23
RARA-208ENST00000577646 STXBP5LQ9Y2K9 1186 aa13.62□□□□□ -0.23
RARA-208ENST00000577646 SIP14410 1827 aa13.62□□□□□ -0.23
RARA-208ENST00000577646 CNTNAP2Q9UHC6 1331 aa13.62□□□□□ -0.23
RARA-208ENST00000577646 ZMYM2Q9UBW7 1377 aa13.61□□□□□ -0.23
RARA-208ENST00000577646 NPHP3-ACAD11A0A0J9YXS1 232 aa13.61□□□□□ -0.23
RARA-208ENST00000577646 CARNS1A5YM72 827 aa13.61□□□□□ -0.23
RARA-208ENST00000577646 TSPAN1O60635 241 aa13.61□□□□□ -0.23
RARA-208ENST00000577646 KINO60870 393 aaKnown RBP13.61□□□□□ -0.23
RARA-208ENST00000577646 GJB5O95377 273 aa13.61□□□□□ -0.23
RARA-208ENST00000577646 PRKCBP05771 671 aa13.61□□□□□ -0.23
RARA-208ENST00000577646 IDEP14735 1019 aa13.61□□□□□ -0.23
RARA-208ENST00000577646 SNW1Q13573 536 aaKnown RBP13.61□□□□□ -0.23
RARA-208ENST00000577646 TWF2Q6IBS0 349 aaKnown RBP13.61□□□□□ -0.23
RARA-208ENST00000577646 SLC27A1Q6PCB7 646 aa13.61□□□□□ -0.23
RARA-208ENST00000577646 HERC6Q8IVU3 1022 aa13.61□□□□□ -0.23
RARA-208ENST00000577646 CRIPAKQ8N1N5 446 aa13.61□□□□□ -0.23
RARA-208ENST00000577646 ZNF668Q96K58 619 aaPredicted RBP13.61□□□□□ -0.23
RARA-208ENST00000577646 FAM161BQ96MY7 647 aa13.61□□□□□ -0.23
RARA-208ENST00000577646 RAD9AQ99638 391 aa13.61□□□□□ -0.23
RARA-208ENST00000577646 ADPGKQ9BRR6 497 aa13.61□□□□□ -0.23
RARA-208ENST00000577646 GOLPH3LQ9H4A5 285 aa13.61□□□□□ -0.23
RARA-208ENST00000577646 CXXC1Q9P0U4 656 aaPredicted RBP13.61□□□□□ -0.23
RARA-208ENST00000577646 LRFN2Q9ULH4 789 aa13.61□□□□□ -0.23
RARA-208ENST00000577646 EXOC7Q9UPT5 735 aa13.61□□□□□ -0.23
RARA-208ENST00000577646 TNFSF13BQ9Y275 285 aa13.61□□□□□ -0.23
RARA-208ENST00000577646 INSL6Q9Y581 213 aa13.61□□□□□ -0.23
RARA-208ENST00000577646 PCDHB7Q9Y5E2 793 aa13.61□□□□□ -0.23
RARA-208ENST00000577646 PCDHA11Q9Y5I1 949 aa13.61□□□□□ -0.23
RARA-208ENST00000577646 TET1Q8NFU7 2136 aa13.61□□□□□ -0.23
RARA-208ENST00000577646 TMEM265A0A087WTH1 108 aa13.6□□□□□ -0.23
RARA-208ENST00000577646 SLC16A4O15374 487 aa13.6□□□□□ -0.23
RARA-208ENST00000577646 PRPF40AO75400 957 aaKnown RBP13.6□□□□□ -0.23
RARA-208ENST00000577646 KIF20AO95235 890 aa13.6□□□□□ -0.23
RARA-208ENST00000577646 SMC2O95347 1197 aa13.6□□□□□ -0.23
RARA-208ENST00000577646 PIGRP01833 764 aa13.6□□□□□ -0.23
RARA-208ENST00000577646 VCANP13611 3396 aa13.6□□□□□ -0.23
RARA-208ENST00000577646 ARF4P18085 180 aaPredicted RBP13.6□□□□□ -0.23
RARA-208ENST00000577646 SNRPFP62306 86 aaKnown RBP13.6□□□□□ -0.23
RARA-208ENST00000577646 ASIC1P78348 528 aa13.6□□□□□ -0.23
RARA-208ENST00000577646 HSP90AA2PQ14568 343 aaPredicted RBP13.6□□□□□ -0.23
RARA-208ENST00000577646 KYAT1Q16773 422 aa13.6□□□□□ -0.23
RARA-208ENST00000577646 TCTN1Q2MV58 587 aa13.6□□□□□ -0.23
RARA-208ENST00000577646 MRPL10Q7Z7H8 261 aaKnown RBP13.6□□□□□ -0.23
RARA-208ENST00000577646 ZBED2Q9BTP6 218 aa13.6□□□□□ -0.23
RARA-208ENST00000577646 STRA6Q9BX79 667 aa13.6□□□□□ -0.23
RARA-208ENST00000577646 ZHX3Q9H4I2 956 aa13.6□□□□□ -0.23
RARA-208ENST00000577646 MRPL44Q9H9J2 332 aaKnown RBP13.6□□□□□ -0.23
RARA-208ENST00000577646 MSRAQ9UJ68 235 aa13.6□□□□□ -0.23
RARA-208ENST00000577646 TBX20Q9UMR3 447 aa13.6□□□□□ -0.23
RARA-208ENST00000577646 EIF3DO15371 548 aaKnown RBP eCLIP13.59□□□□□ -0.23
RARA-208ENST00000577646 CSDE1O75534 798 aaKnown RBP13.59□□□□□ -0.23
RARA-208ENST00000577646 TOM1L1O75674 476 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms