RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 SRGAP1Q7Z6B7 1085 aa13.21□□□□□ -0.29
CDH8-202ENST00000577228 MRPL10Q7Z7H8 261 aaKnown RBP13.21□□□□□ -0.29
CDH8-202ENST00000577228 GPR149Q86SP6 731 aa13.21□□□□□ -0.29
CDH8-202ENST00000577228 EXOC8Q8IYI6 725 aa13.21□□□□□ -0.29
CDH8-202ENST00000577228 FEZF2Q8TBJ5 459 aa13.21□□□□□ -0.29
CDH8-202ENST00000577228 TMEM143Q96AN5 459 aa13.21□□□□□ -0.29
CDH8-202ENST00000577228 ACSF2Q96CM8 615 aaPredicted RBP13.21□□□□□ -0.29
CDH8-202ENST00000577228 ZNF274Q96GC6 653 aaPredicted RBP13.21□□□□□ -0.29
CDH8-202ENST00000577228 FAM20AQ96MK3 541 aa13.21□□□□□ -0.29
CDH8-202ENST00000577228 KLHL5Q96PQ7 755 aa13.21□□□□□ -0.29
CDH8-202ENST00000577228 TMEM175Q9BSA9 504 aa13.21□□□□□ -0.29
CDH8-202ENST00000577228 SLKQ9H2G2 1235 aaPredicted RBP13.21□□□□□ -0.29
CDH8-202ENST00000577228 ZSWIM6Q9HCJ5 1215 aa13.21□□□□□ -0.29
CDH8-202ENST00000577228 KANSL3Q9P2N6 904 aa13.21□□□□□ -0.29
CDH8-202ENST00000577228 VAV3Q9UKW4 847 aa13.21□□□□□ -0.29
CDH8-202ENST00000577228 PPME1Q9Y570 386 aa13.21□□□□□ -0.29
CDH8-202ENST00000577228 CYP46A1Q9Y6A2 500 aa13.21□□□□□ -0.29
CDH8-202ENST00000577228 ZFHX2Q9C0A1 2572 aaPredicted RBP13.21□□□□□ -0.3
CDH8-202ENST00000577228 CCDC194A0A1B0GVG4 234 aa13.2□□□□□ -0.3
CDH8-202ENST00000577228 DDHD2O94830 711 aa13.2□□□□□ -0.3
CDH8-202ENST00000577228 ALDH2P05091 517 aa13.2□□□□□ -0.3
CDH8-202ENST00000577228 P4HBP07237 508 aaKnown RBP13.2□□□□□ -0.3
CDH8-202ENST00000577228 CNPP09543 421 aaKnown RBP13.2□□□□□ -0.3
CDH8-202ENST00000577228 SRGAP2CP0DJJ0 459 aa13.2□□□□□ -0.3
CDH8-202ENST00000577228 GCFC2P16383 781 aaKnown RBP13.2□□□□□ -0.3
CDH8-202ENST00000577228 CLCN4P51793 760 aa13.2□□□□□ -0.3
CDH8-202ENST00000577228 LAMTOR4Q0VGL1 99 aa13.2□□□□□ -0.3
CDH8-202ENST00000577228 STK3Q13188 491 aa13.2□□□□□ -0.3
CDH8-202ENST00000577228 NEK8Q86SG6 692 aa13.2□□□□□ -0.3
CDH8-202ENST00000577228 ZNF579Q8NAF0 562 aaKnown RBP13.2□□□□□ -0.3
CDH8-202ENST00000577228 PRPF31Q8WWY3 499 aaKnown RBP13.2□□□□□ -0.3
CDH8-202ENST00000577228 LARP6Q9BRS8 491 aaKnown RBP13.2□□□□□ -0.3
CDH8-202ENST00000577228 DHX33Q9H6R0 707 aaKnown RBP13.2□□□□□ -0.3
CDH8-202ENST00000577228 MINDY3Q9H8M7 445 aa13.2□□□□□ -0.3
CDH8-202ENST00000577228 KCNMB3Q9NPA1 279 aa13.2□□□□□ -0.3
CDH8-202ENST00000577228 MRPL17Q9NRX2 175 aaKnown RBP13.2□□□□□ -0.3
CDH8-202ENST00000577228 BMP2KQ9NSY1 1161 aaPredicted RBP13.2□□□□□ -0.3
CDH8-202ENST00000577228 KCNJ14Q9UNX9 436 aa13.2□□□□□ -0.3
CDH8-202ENST00000577228 FAN1Q9Y2M0 1017 aa13.2□□□□□ -0.3
CDH8-202ENST00000577228 DENND4AQ7Z401 1863 aa13.19□□□□□ -0.3
CDH8-202ENST00000577228 PROB1E7EW31 1015 aa13.19□□□□□ -0.3
CDH8-202ENST00000577228 GAS2O43903 313 aaKnown RBP13.19□□□□□ -0.3
CDH8-202ENST00000577228 URODP06132 367 aa13.19□□□□□ -0.3
CDH8-202ENST00000577228 CLCN5P51795 746 aa13.19□□□□□ -0.3
CDH8-202ENST00000577228 AFF1P51825 1210 aaKnown RBP13.19□□□□□ -0.3
CDH8-202ENST00000577228 EMC2Q15006 297 aa13.19□□□□□ -0.3
CDH8-202ENST00000577228 UBXN11Q5T124 520 aa13.19□□□□□ -0.3
CDH8-202ENST00000577228 RNF149Q8NC42 400 aa13.19□□□□□ -0.3
CDH8-202ENST00000577228 FLCNQ8NFG4 579 aa13.19□□□□□ -0.3
CDH8-202ENST00000577228 TCP11Q8WWU5 503 aa13.19□□□□□ -0.3
CDH8-202ENST00000577228 LXNQ9BS40 222 aa13.19□□□□□ -0.3
CDH8-202ENST00000577228 HERC2P3Q9BVR0 1158 aa13.19□□□□□ -0.3
CDH8-202ENST00000577228 WRAP73Q9P2S5 460 aaPredicted RBP13.19□□□□□ -0.3
CDH8-202ENST00000577228 PRG3Q9Y2Y8 225 aaPredicted RBP13.19□□□□□ -0.3
CDH8-202ENST00000577228 PLXNA3P51805 1871 aa13.19□□□□□ -0.3
CDH8-202ENST00000577228 C2CD2LO14523 706 aa13.18□□□□□ -0.3
CDH8-202ENST00000577228 NRP1O14786 923 aa13.18□□□□□ -0.3
CDH8-202ENST00000577228 MARCH6O60337 910 aa13.18□□□□□ -0.3
CDH8-202ENST00000577228 LILRB3O75022 631 aa13.18□□□□□ -0.3
CDH8-202ENST00000577228 CDKL5O76039 1030 aa13.18□□□□□ -0.3
CDH8-202ENST00000577228 ERLIN2O94905 339 aa13.18□□□□□ -0.3
CDH8-202ENST00000577228 POMCP01189 267 aa13.18□□□□□ -0.3
CDH8-202ENST00000577228 SOD2P04179 222 aa13.18□□□□□ -0.3
CDH8-202ENST00000577228 ITGA4P13612 1032 aa13.18□□□□□ -0.3
CDH8-202ENST00000577228 NCLP19338 710 aaKnown RBP13.18□□□□□ -0.3
CDH8-202ENST00000577228 HOXA11P31270 313 aaPredicted RBP13.18□□□□□ -0.3
CDH8-202ENST00000577228 YWHABP31946 246 aaKnown RBP13.18□□□□□ -0.3
CDH8-202ENST00000577228 AK2P54819 239 aa13.18□□□□□ -0.3
CDH8-202ENST00000577228 TDGQ13569 410 aa13.18□□□□□ -0.3
CDH8-202ENST00000577228 EPHA7Q15375 998 aa13.18□□□□□ -0.3
CDH8-202ENST00000577228 NCAPH2Q6IBW4 605 aa13.18□□□□□ -0.3
CDH8-202ENST00000577228 PPP4R3AQ6IN85 833 aa13.18□□□□□ -0.3
CDH8-202ENST00000577228 C15orf39Q6ZRI6 1047 aa13.18□□□□□ -0.3
CDH8-202ENST00000577228 OTUD6AQ7L8S5 288 aa13.18□□□□□ -0.3
CDH8-202ENST00000577228 C4orf19Q8IY42 314 aa13.18□□□□□ -0.3
CDH8-202ENST00000577228 CNNM3Q8NE01 707 aa13.18□□□□□ -0.3
CDH8-202ENST00000577228 SNX27Q96L92 541 aa13.18□□□□□ -0.3
CDH8-202ENST00000577228 NAP1L4Q99733 375 aaKnown RBP13.18□□□□□ -0.3
CDH8-202ENST00000577228 PHF20Q9BVI0 1012 aa13.18□□□□□ -0.3
CDH8-202ENST00000577228 TM6SF1Q9BZW5 370 aa13.18□□□□□ -0.3
CDH8-202ENST00000577228 UBN1Q9NPG3 1134 aa13.18□□□□□ -0.3
CDH8-202ENST00000577228 SSX2IPQ9Y2D8 614 aa13.18□□□□□ -0.3
CDH8-202ENST00000577228 PRR23AA6NEV1 266 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 TBX3O15119 743 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 ASAP2O43150 1006 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 EPB41L2O43491 1005 aaKnown RBP13.17□□□□□ -0.3
CDH8-202ENST00000577228 CCNT1O60563 726 aaKnown RBP13.17□□□□□ -0.3
CDH8-202ENST00000577228 ADH1AP07327 375 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 XBP1P17861 261 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 NBL1P41271 181 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 OR1G1P47890 313 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 XKR9Q5GH70 373 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 CWF19L1Q69YN2 538 aaKnown RBP13.17□□□□□ -0.3
CDH8-202ENST00000577228 ELMSAN1Q6PJG2 1045 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 PIK3AP1Q6ZUJ8 805 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 ASCL5Q7RTU5 278 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 FERMT3Q86UX7 667 aa13.17□□□□□ -0.3
CDH8-202ENST00000577228 SMG8Q8ND04 991 aaKnown RBP13.17□□□□□ -0.3
CDH8-202ENST00000577228 CMASQ8NFW8 434 aaPredicted RBP13.17□□□□□ -0.3
CDH8-202ENST00000577228 HAS1Q92839 578 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms