RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 TMEM132AQ24JP5 1023 aa17.2■□□□□ 0.34
SF3B3-215ENST00000577085 RILPL1Q5EBL4 403 aa17.2■□□□□ 0.34
SF3B3-215ENST00000577085 PADI6Q6TGC4 694 aa17.2■□□□□ 0.34
SF3B3-215ENST00000577085 DTHD1Q6ZMT9 781 aa17.2■□□□□ 0.34
SF3B3-215ENST00000577085 EFHBQ8N7U6 833 aa17.2■□□□□ 0.34
SF3B3-215ENST00000577085 CCDC51Q96ER9 411 aa17.2■□□□□ 0.34
SF3B3-215ENST00000577085 CDCA3Q99618 268 aaPredicted RBP17.2■□□□□ 0.34
SF3B3-215ENST00000577085 NFKBIZQ9BYH8 718 aa17.2■□□□□ 0.34
SF3B3-215ENST00000577085 RSAD1Q9HA92 442 aa17.2■□□□□ 0.34
SF3B3-215ENST00000577085 UBN1Q9NPG3 1134 aa17.2■□□□□ 0.34
SF3B3-215ENST00000577085 KANSL3Q9P2N6 904 aa17.2■□□□□ 0.34
SF3B3-215ENST00000577085 CD207Q9UJ71 328 aa17.2■□□□□ 0.34
SF3B3-215ENST00000577085 PCDHB6Q9Y5E3 794 aa17.2■□□□□ 0.34
SF3B3-215ENST00000577085 PCDHGC5Q9Y5F6 944 aa17.2■□□□□ 0.34
SF3B3-215ENST00000577085 CNTNAP2Q9UHC6 1331 aa17.2■□□□□ 0.34
SF3B3-215ENST00000577085 PER2O15055 1255 aa17.19■□□□□ 0.34
SF3B3-215ENST00000577085 OFD1O75665 1012 aa17.19■□□□□ 0.34
SF3B3-215ENST00000577085 CD2BP2O95400 341 aaKnown RBP17.19■□□□□ 0.34
SF3B3-215ENST00000577085 ITGA4P13612 1032 aa17.19■□□□□ 0.34
SF3B3-215ENST00000577085 HOXA11P31270 313 aaPredicted RBP17.19■□□□□ 0.34
SF3B3-215ENST00000577085 LTBRP36941 435 aa17.19■□□□□ 0.34
SF3B3-215ENST00000577085 TOB1P50616 345 aaPredicted RBP17.19■□□□□ 0.34
SF3B3-215ENST00000577085 MBTD1Q05BQ5 628 aa17.19■□□□□ 0.34
SF3B3-215ENST00000577085 PDIA5Q14554 519 aa17.19■□□□□ 0.34
SF3B3-215ENST00000577085 KRT79Q5XKE5 535 aa17.19■□□□□ 0.34
SF3B3-215ENST00000577085 SLC39A11Q8N1S5 342 aa17.19■□□□□ 0.34
SF3B3-215ENST00000577085 SNX29Q8TEQ0 813 aa17.19■□□□□ 0.34
SF3B3-215ENST00000577085 CPB2Q96IY4 423 aa17.19■□□□□ 0.34
SF3B3-215ENST00000577085 GPRC5CQ9NQ84 441 aa17.19■□□□□ 0.34
SF3B3-215ENST00000577085 TBC1D13Q9NVG8 400 aa17.19■□□□□ 0.34
SF3B3-215ENST00000577085 CUL9Q8IWT3 2517 aa17.19■□□□□ 0.34
SF3B3-215ENST00000577085 PLXNA4Q9HCM2 1894 aa17.18■□□□□ 0.34
SF3B3-215ENST00000577085 MEIS3P2A8K0S8 358 aa17.18■□□□□ 0.34
SF3B3-215ENST00000577085 NT5C1B-RDH14C9J2C7 533 aa17.18■□□□□ 0.34
SF3B3-215ENST00000577085 TBX10O75333 385 aa17.18■□□□□ 0.34
SF3B3-215ENST00000577085 NCLP19338 710 aaKnown RBP17.18■□□□□ 0.34
SF3B3-215ENST00000577085 DLX2Q07687 328 aaPredicted RBP17.18■□□□□ 0.34
SF3B3-215ENST00000577085 SMAD4Q13485 552 aaKnown RBP17.18■□□□□ 0.34
SF3B3-215ENST00000577085 SMC1AQ14683 1233 aaKnown RBP17.18■□□□□ 0.34
SF3B3-215ENST00000577085 LARP1BQ659C4 914 aaKnown RBP17.18■□□□□ 0.34
SF3B3-215ENST00000577085 IFNLR1Q8IU57 520 aaPredicted RBP17.18■□□□□ 0.34
SF3B3-215ENST00000577085 FAM178BQ8IXR5 827 aa17.18■□□□□ 0.34
SF3B3-215ENST00000577085 GJD3Q8N144 294 aa17.18■□□□□ 0.34
SF3B3-215ENST00000577085 C4orf32Q8N8J7 132 aa17.18■□□□□ 0.34
SF3B3-215ENST00000577085 IFT74Q96LB3 600 aa17.18■□□□□ 0.34
SF3B3-215ENST00000577085 CSRNP2Q9H175 543 aa17.18■□□□□ 0.34
SF3B3-215ENST00000577085 C2orf40Q9H1Z8 148 aa17.18■□□□□ 0.34
SF3B3-215ENST00000577085 DDX19AQ9NUU7 478 aaKnown RBP17.18■□□□□ 0.34
SF3B3-215ENST00000577085 KIAA1024Q9UPX6 916 aa17.18■□□□□ 0.34
SF3B3-215ENST00000577085 MUC3AQ02505 3323 aa17.17■□□□□ 0.34
SF3B3-215ENST00000577085 FSCN2O14926 492 aa17.17■□□□□ 0.34
SF3B3-215ENST00000577085 CYP11B2P19099 503 aa17.17■□□□□ 0.34
SF3B3-215ENST00000577085 PRPHP41219 470 aa17.17■□□□□ 0.34
SF3B3-215ENST00000577085 PPP2R5AQ15172 486 aa17.17■□□□□ 0.34
SF3B3-215ENST00000577085 ZRSR1Q15695 479 aaKnown RBP17.17■□□□□ 0.34
SF3B3-215ENST00000577085 DUSP6Q16828 381 aa17.17■□□□□ 0.34
SF3B3-215ENST00000577085 UBXN11Q5T124 520 aa17.17■□□□□ 0.34
SF3B3-215ENST00000577085 AGMOQ6ZNB7 445 aa17.17■□□□□ 0.34
SF3B3-215ENST00000577085 MRPL10Q7Z7H8 261 aaKnown RBP17.17■□□□□ 0.34
SF3B3-215ENST00000577085 DEPTORQ8TB45 409 aa17.17■□□□□ 0.34
SF3B3-215ENST00000577085 POP1Q99575 1024 aaKnown RBP17.17■□□□□ 0.34
SF3B3-215ENST00000577085 APOL6Q9BWW8 343 aa17.17■□□□□ 0.34
SF3B3-215ENST00000577085 BHMT2Q9H2M3 363 aa17.17■□□□□ 0.34
SF3B3-215ENST00000577085 PRMT7Q9NVM4 692 aaPredicted RBP17.17■□□□□ 0.34
SF3B3-215ENST00000577085 PRKAG3Q9UGI9 489 aa17.17■□□□□ 0.34
SF3B3-215ENST00000577085 BARX2Q9UMQ3 279 aaPredicted RBP17.17■□□□□ 0.34
SF3B3-215ENST00000577085 DNM3Q9UQ16 869 aa17.17■□□□□ 0.34
SF3B3-215ENST00000577085 IPPQ9Y573 584 aa17.17■□□□□ 0.34
SF3B3-215ENST00000577085 NR1I2O75469 434 aa17.16■□□□□ 0.34
SF3B3-215ENST00000577085 POMCP01189 267 aa17.16■□□□□ 0.34
SF3B3-215ENST00000577085 ARF4P18085 180 aaPredicted RBP17.16■□□□□ 0.34
SF3B3-215ENST00000577085 LIG1P18858 919 aa17.16■□□□□ 0.34
SF3B3-215ENST00000577085 SLC27A1Q6PCB7 646 aa17.16■□□□□ 0.34
SF3B3-215ENST00000577085 IGSF22Q8N9C0 903 aa17.16■□□□□ 0.34
SF3B3-215ENST00000577085 PRIMPOLQ96LW4 560 aa17.16■□□□□ 0.34
SF3B3-215ENST00000577085 C1QTNF1Q9BXJ1 281 aa17.16■□□□□ 0.34
SF3B3-215ENST00000577085 EIF2AQ9BY44 585 aaKnown RBP17.16■□□□□ 0.34
SF3B3-215ENST00000577085 NRDE2Q9H7Z3 1164 aa17.16■□□□□ 0.34
SF3B3-215ENST00000577085 STK39Q9UEW8 545 aa17.16■□□□□ 0.34
SF3B3-215ENST00000577085 ATG2AQ2TAZ0 1938 aa17.15■□□□□ 0.34
SF3B3-215ENST00000577085 HIDE1A8MVS5 230 aa17.15■□□□□ 0.34
SF3B3-215ENST00000577085 B4GALT5O43286 388 aa17.15■□□□□ 0.34
SF3B3-215ENST00000577085 MBTPS2O43462 519 aa17.15■□□□□ 0.34
SF3B3-215ENST00000577085 CXCL14O95715 111 aa17.15■□□□□ 0.34
SF3B3-215ENST00000577085 ALDH2P05091 517 aa17.15■□□□□ 0.34
SF3B3-215ENST00000577085 GALTP07902 379 aa17.15■□□□□ 0.34
SF3B3-215ENST00000577085 NAMPTP43490 491 aa17.15■□□□□ 0.34
SF3B3-215ENST00000577085 PRPF4BQ13523 1007 aaKnown RBP17.15■□□□□ 0.34
SF3B3-215ENST00000577085 SMAD2Q15796 467 aaKnown RBP17.15■□□□□ 0.34
SF3B3-215ENST00000577085 MAPK6Q16659 721 aa17.15■□□□□ 0.34
SF3B3-215ENST00000577085 LLGL2Q6P1M3 1020 aa17.15■□□□□ 0.34
SF3B3-215ENST00000577085 ADHFE1Q8IWW8 467 aa17.15■□□□□ 0.34
SF3B3-215ENST00000577085 VPS52Q8N1B4 723 aa17.15■□□□□ 0.34
SF3B3-215ENST00000577085 SMG8Q8ND04 991 aaKnown RBP17.15■□□□□ 0.34
SF3B3-215ENST00000577085 KIFAP3Q92845 792 aa17.15■□□□□ 0.34
SF3B3-215ENST00000577085 IGSF21Q96ID5 467 aa17.15■□□□□ 0.34
SF3B3-215ENST00000577085 CDK5RAP3Q96JB5 506 aa17.15■□□□□ 0.34
SF3B3-215ENST00000577085 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.15■□□□□ 0.34
SF3B3-215ENST00000577085 DNAJB4Q9UDY4 337 aa17.15■□□□□ 0.34
SF3B3-215ENST00000577085 FAN1Q9Y2M0 1017 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms