RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 PALB2Q86YC2 1186 aa11.37□□□□□ -0.59
NPLOC4-220ENST00000576940 C1orf210Q8IVY1 113 aa11.37□□□□□ -0.59
NPLOC4-220ENST00000576940 RASEFQ8IZ41 740 aa11.37□□□□□ -0.59
NPLOC4-220ENST00000576940 CMASQ8NFW8 434 aaPredicted RBP11.37□□□□□ -0.59
NPLOC4-220ENST00000576940 URGCPQ8TCY9 931 aa11.37□□□□□ -0.59
NPLOC4-220ENST00000576940 RUBCNQ92622 972 aa11.37□□□□□ -0.59
NPLOC4-220ENST00000576940 SLC5A5Q92911 643 aa11.37□□□□□ -0.59
NPLOC4-220ENST00000576940 ZNF707Q96C28 371 aaPredicted RBP11.37□□□□□ -0.59
NPLOC4-220ENST00000576940 PGBD4Q96DM1 585 aa11.37□□□□□ -0.59
NPLOC4-220ENST00000576940 NLRP4Q96MN2 994 aa11.37□□□□□ -0.59
NPLOC4-220ENST00000576940 CNTNAP3BQ96NU0 1288 aa11.37□□□□□ -0.59
NPLOC4-220ENST00000576940 RPS6KC1Q96S38 1066 aa11.37□□□□□ -0.59
NPLOC4-220ENST00000576940 TMEM175Q9BSA9 504 aa11.37□□□□□ -0.59
NPLOC4-220ENST00000576940 RPP25Q9BUL9 199 aaKnown RBP11.37□□□□□ -0.59
NPLOC4-220ENST00000576940 CNTNAP3Q9BZ76 1288 aa11.37□□□□□ -0.59
NPLOC4-220ENST00000576940 INO80BQ9C086 356 aaPredicted RBP11.37□□□□□ -0.59
NPLOC4-220ENST00000576940 ANO2Q9NQ90 1003 aa11.37□□□□□ -0.59
NPLOC4-220ENST00000576940 MARCH5Q9NX47 278 aa11.37□□□□□ -0.59
NPLOC4-220ENST00000576940 EPS15L1Q9UBC2 864 aa11.37□□□□□ -0.59
NPLOC4-220ENST00000576940 PRG3Q9Y2Y8 225 aaPredicted RBP11.37□□□□□ -0.59
NPLOC4-220ENST00000576940 CACNA1IQ9P0X4 2223 aa11.37□□□□□ -0.59
NPLOC4-220ENST00000576940 CLUHO75153 1309 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 NCOR2Q9Y618 2525 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 ESYT2A0FGR8 921 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 GAS2O43903 313 aaKnown RBP11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 MAFO75444 373 aaPredicted RBP11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 LAMP2P13473 410 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 GNA11P29992 359 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 SFNP31947 248 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 OR1G1P47890 313 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 RAB27AP51159 221 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 JAK3P52333 1124 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 NONOQ15233 471 aaKnown RBP eCLIP11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 RSPO4Q2I0M5 234 aaPredicted RBP11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 XKR3Q5GH77 459 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 UBXN11Q5T124 520 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 LRCH2Q5VUJ6 765 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 KIAA0319Q5VV43 1072 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 PHLDB3Q6NSJ2 640 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 MIER3Q7Z3K6 550 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 ZNF410Q86VK4 478 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 MAML2Q8IZL2 1156 aaPredicted RBP11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 SUMF1Q8NBK3 374 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 RSPH1Q8WYR4 309 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 SMG7Q92540 1137 aaKnown RBP11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 STAMQ92783 540 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 B3GALT6Q96L58 329 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 RIT2Q99578 217 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 TEKT3Q9BXF9 490 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 FOXQ1Q9C009 403 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 NT5C3AQ9H0P0 336 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 RSAD1Q9HA92 442 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 PIDD1Q9HB75 910 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 IFT122Q9HBG6 1241 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 MIOSQ9NXC5 875 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 DLL3Q9NYJ7 618 aa11.36□□□□□ -0.59
NPLOC4-220ENST00000576940 OTOGLQ3ZCN5 2332 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 F8W810 466 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 PRPF3O43395 683 aaKnown RBP11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 PSMD10O75832 226 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 GLUD1P00367 558 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 URODP06132 367 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 ADH1AP07327 375 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 SRGAP2CP0DJJ0 459 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 CPA1P15085 419 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 HOXA11P31270 313 aaPredicted RBP11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 GPC5P78333 572 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 DCLRE1AQ6PJP8 1040 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 ANO5Q75V66 913 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 GET4Q7L5D6 327 aaPredicted RBP11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 GLYCTKQ8IVS8 523 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 COLGALT2Q8IYK4 626 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 ZNF579Q8NAF0 562 aaKnown RBP11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 PHKBQ93100 1093 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 NXPE3Q969Y0 559 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 HERC2P3Q9BVR0 1158 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 RNF39Q9H2S5 420 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 MINDY3Q9H8M7 445 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 RXFP1Q9HBX9 757 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 ARHGEF3Q9NR81 526 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 AGPAT5Q9NUQ2 364 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 KANSL3Q9P2N6 904 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 STK39Q9UEW8 545 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 NUMBLQ9Y6R0 609 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 CEP250Q9BV73 2442 aa11.35□□□□□ -0.59
NPLOC4-220ENST00000576940 ZFHX4Q86UP3 3567 aa11.34□□□□□ -0.59
NPLOC4-220ENST00000576940 TGM5O43548 720 aa11.34□□□□□ -0.59
NPLOC4-220ENST00000576940 EFEMP2O95967 443 aa11.34□□□□□ -0.59
NPLOC4-220ENST00000576940 USP11P51784 963 aa11.34□□□□□ -0.59
NPLOC4-220ENST00000576940 NPEPPSP55786 919 aa11.34□□□□□ -0.59
NPLOC4-220ENST00000576940 SNW1Q13573 536 aaKnown RBP11.34□□□□□ -0.59
NPLOC4-220ENST00000576940 RNF20Q5VTR2 975 aa11.34□□□□□ -0.59
NPLOC4-220ENST00000576940 PLA2G4FQ68DD2 849 aa11.34□□□□□ -0.59
NPLOC4-220ENST00000576940 ZC3H14Q6PJT7 736 aaKnown RBP11.34□□□□□ -0.59
NPLOC4-220ENST00000576940 B3GNT9Q6UX72 402 aa11.34□□□□□ -0.59
NPLOC4-220ENST00000576940 CYP26C1Q6V0L0 522 aa11.34□□□□□ -0.59
NPLOC4-220ENST00000576940 RNF168Q8IYW5 571 aaPredicted RBP11.34□□□□□ -0.59
NPLOC4-220ENST00000576940 SMG8Q8ND04 991 aaKnown RBP11.34□□□□□ -0.59
NPLOC4-220ENST00000576940 CCDC12Q8WUD4 166 aaPredicted RBP11.34□□□□□ -0.59
NPLOC4-220ENST00000576940 TMEM143Q96AN5 459 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms