RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 WDR35Q9P2L0 1181 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 NIP7Q9Y221 180 aaKnown RBP eCLIP15.49■□□□□ 0.07
SMG6-215ENST00000574501 NCANO14594 1321 aa15.49■□□□□ 0.07
SMG6-215ENST00000574501 CLIC2O15247 247 aa15.48■□□□□ 0.07
SMG6-215ENST00000574501 FOXN2P32314 431 aa15.48■□□□□ 0.07
SMG6-215ENST00000574501 MTFR1Q15390 333 aa15.48■□□□□ 0.07
SMG6-215ENST00000574501 UBE2SQ16763 222 aa15.48■□□□□ 0.07
SMG6-215ENST00000574501 MUM1Q2TAK8 710 aa15.48■□□□□ 0.07
SMG6-215ENST00000574501 LRMDAQ9H2I8 198 aa15.48■□□□□ 0.07
SMG6-215ENST00000574501 PCYOX1Q9UHG3 505 aa15.48■□□□□ 0.07
SMG6-215ENST00000574501 CYP11B2P19099 503 aa15.48■□□□□ 0.07
SMG6-215ENST00000574501 CNGA1P29973 690 aa15.48■□□□□ 0.07
SMG6-215ENST00000574501 HOXA7P31268 230 aaPredicted RBP15.48■□□□□ 0.07
SMG6-215ENST00000574501 LBRQ14739 615 aaKnown RBP15.48■□□□□ 0.07
SMG6-215ENST00000574501 PARP6Q2NL67 630 aa15.48■□□□□ 0.07
SMG6-215ENST00000574501 GRIPAP1Q4V328 841 aa15.48■□□□□ 0.07
SMG6-215ENST00000574501 MTHFD1LQ6UB35 978 aa15.48■□□□□ 0.07
SMG6-215ENST00000574501 RUNDC3BQ96NL0 473 aa15.48■□□□□ 0.07
SMG6-215ENST00000574501 TBC1D10AQ9BXI6 508 aa15.48■□□□□ 0.07
SMG6-215ENST00000574501 SAP30BPQ9UHR5 308 aaKnown RBP15.48■□□□□ 0.07
SMG6-215ENST00000574501 LAMB1P07942 1786 aa15.48■□□□□ 0.07
SMG6-215ENST00000574501 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.47■□□□□ 0.07
SMG6-215ENST00000574501 LGR5O75473 907 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 PYGLP06737 847 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 TAC1P20366 129 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 LMNB1P20700 586 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 CTNNA2P26232 953 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 ANXA13P27216 316 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 HOXD13P35453 343 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 CHKAP35790 457 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 SSR1P43307 286 aaKnown RBP15.47■□□□□ 0.07
SMG6-215ENST00000574501 ORC2Q13416 577 aaPredicted RBP15.47■□□□□ 0.07
SMG6-215ENST00000574501 UBE4AQ14139 1066 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 PDCD2Q16342 344 aaPredicted RBP15.47■□□□□ 0.07
SMG6-215ENST00000574501 TSNAXIP1Q2TAA8 658 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 ARSHQ5FYA8 562 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 SRRM1Q8IYB3 904 aaKnown RBP15.47■□□□□ 0.07
SMG6-215ENST00000574501 SERPINB12Q96P63 405 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 TRIM4Q9C037 500 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 TAOK3Q9H2K8 898 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 AAASQ9NRG9 546 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.47■□□□□ 0.07
SMG6-215ENST00000574501 DDX25Q9UHL0 483 aaKnown RBP15.47■□□□□ 0.07
SMG6-215ENST00000574501 PCDHA12Q9UN75 941 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 CHKBQ9Y259 395 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 PCDHB13Q9Y5F0 798 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 FRMPD2Q68DX3 1309 aaPredicted RBP15.47■□□□□ 0.07
SMG6-215ENST00000574501 PITPNM2Q9BZ72 1349 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 TOGARAM1Q9Y4F4 1720 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 E7ENQ6 273 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 RNF8O76064 485 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 CBX6O95503 412 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 SETDB1Q15047 1291 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 TBC1D25Q3MII6 688 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 PPP4R3CPQ6ZMV5 832 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.47■□□□□ 0.07
SMG6-215ENST00000574501 SPOCK2Q92563 424 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 SLC35C1Q96A29 364 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 MAGEB18Q96M61 343 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 EPAS1Q99814 870 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 PPP1R12CQ9BZL4 782 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 DENND2DQ9H6A0 471 aaPredicted RBP15.47■□□□□ 0.07
SMG6-215ENST00000574501 BCAS3Q9H6U6 928 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 KIAA1551Q9HCM1 1747 aa15.47■□□□□ 0.07
SMG6-215ENST00000574501 ACADSP16219 412 aa15.46■□□□□ 0.07
SMG6-215ENST00000574501 SOX5P35711 763 aa15.46■□□□□ 0.07
SMG6-215ENST00000574501 ADCY7P51828 1080 aa15.46■□□□□ 0.07
SMG6-215ENST00000574501 CCDC15Q0P6D6 951 aa15.46■□□□□ 0.07
SMG6-215ENST00000574501 DRAP1Q14919 205 aaPredicted RBP15.46■□□□□ 0.07
SMG6-215ENST00000574501 KYNUQ16719 465 aa15.46■□□□□ 0.07
SMG6-215ENST00000574501 KNOP1Q1ED39 458 aaKnown RBP15.46■□□□□ 0.07
SMG6-215ENST00000574501 SGSM1Q2NKQ1 1148 aa15.46■□□□□ 0.07
SMG6-215ENST00000574501 AGGF1Q8N302 714 aaeCLIP15.46■□□□□ 0.07
SMG6-215ENST00000574501 DRAXINQ8NBI3 349 aaPredicted RBP15.46■□□□□ 0.07
SMG6-215ENST00000574501 LRRC37BQ96QE4 947 aa15.46■□□□□ 0.07
SMG6-215ENST00000574501 IKZF4Q9H2S9 585 aa15.46■□□□□ 0.07
SMG6-215ENST00000574501 SYNGAP1Q96PV0 1343 aa15.46■□□□□ 0.07
SMG6-215ENST00000574501 USP17L5A8MUK1 530 aa15.46■□□□□ 0.07
SMG6-215ENST00000574501 PYGMP11217 842 aa15.46■□□□□ 0.07
SMG6-215ENST00000574501 CETPP11597 493 aa15.46■□□□□ 0.07
SMG6-215ENST00000574501 COILP38432 576 aaPredicted RBP15.46■□□□□ 0.07
SMG6-215ENST00000574501 POLGP54098 1239 aaPredicted RBP15.46■□□□□ 0.07
SMG6-215ENST00000574501 CALCOCO2Q13137 446 aa15.46■□□□□ 0.07
SMG6-215ENST00000574501 DNAJC3Q13217 504 aa15.46■□□□□ 0.07
SMG6-215ENST00000574501 ACVR2BQ13705 512 aa15.46■□□□□ 0.07
SMG6-215ENST00000574501 C3orf67Q6ZVT6 689 aa15.46■□□□□ 0.07
SMG6-215ENST00000574501 TRMT10CQ7L0Y3 403 aaKnown RBP15.46■□□□□ 0.07
SMG6-215ENST00000574501 EZH1Q92800 747 aaPredicted RBP15.46■□□□□ 0.07
SMG6-215ENST00000574501 SLC7A6OSQ96CW6 309 aaPredicted RBP15.46■□□□□ 0.07
SMG6-215ENST00000574501 PWWP2AQ96N64 755 aa15.46■□□□□ 0.07
SMG6-215ENST00000574501 NT5C3AQ9H0P0 336 aa15.46■□□□□ 0.07
SMG6-215ENST00000574501 NKIRAS1Q9NYS0 192 aa15.46■□□□□ 0.07
SMG6-215ENST00000574501 CTTNBP2NLQ9P2B4 639 aa15.46■□□□□ 0.07
SMG6-215ENST00000574501 ATP8B3O60423 1300 aa15.46■□□□□ 0.06
SMG6-215ENST00000574501 ABLIM1O14639 778 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 T-ENOLP0DO92 83 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 ALAS1P13196 640 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 RASA1P20936 1047 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 TNFAIP3P21580 790 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 ATP5DP30049 168 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms