RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 CCDC169A6NNP5 214 aa12.17□□□□□ -0.46
CHD3-216ENST00000573936 H0YCG3 227 aa12.17□□□□□ -0.46
CHD3-216ENST00000573936 MGEA5O60502 916 aa12.17□□□□□ -0.46
CHD3-216ENST00000573936 UPP2O95045 317 aa12.17□□□□□ -0.46
CHD3-216ENST00000573936 PLS3P13797 630 aa12.17□□□□□ -0.46
CHD3-216ENST00000573936 SCP2P22307 547 aa12.17□□□□□ -0.46
CHD3-216ENST00000573936 CMA1P23946 247 aa12.17□□□□□ -0.46
CHD3-216ENST00000573936 KCNQ1P51787 676 aa12.17□□□□□ -0.46
CHD3-216ENST00000573936 PEX3P56589 373 aa12.17□□□□□ -0.46
CHD3-216ENST00000573936 FAM189BP81408 668 aa12.17□□□□□ -0.46
CHD3-216ENST00000573936 MBTD1Q05BQ5 628 aa12.17□□□□□ -0.46
CHD3-216ENST00000573936 MAPK6Q16659 721 aa12.17□□□□□ -0.46
CHD3-216ENST00000573936 FAM187BQ17R55 369 aa12.17□□□□□ -0.46
CHD3-216ENST00000573936 ARSHQ5FYA8 562 aa12.17□□□□□ -0.46
CHD3-216ENST00000573936 PPP4R3CPQ6ZMV5 832 aa12.17□□□□□ -0.46
CHD3-216ENST00000573936 PDILTQ8N807 584 aa12.17□□□□□ -0.46
CHD3-216ENST00000573936 LINC01599Q8WXQ3 324 aa12.17□□□□□ -0.46
CHD3-216ENST00000573936 CCDC51Q96ER9 411 aa12.17□□□□□ -0.46
CHD3-216ENST00000573936 NTPCRQ9BSD7 190 aaKnown RBP12.17□□□□□ -0.46
CHD3-216ENST00000573936 TRAIPQ9BWF2 469 aa12.17□□□□□ -0.46
CHD3-216ENST00000573936 TMEM134Q9H6X4 195 aa12.17□□□□□ -0.46
CHD3-216ENST00000573936 MINDY3Q9H8M7 445 aa12.17□□□□□ -0.46
CHD3-216ENST00000573936 KMT5AQ9NQR1 393 aa12.17□□□□□ -0.46
CHD3-216ENST00000573936 AGPAT5Q9NUQ2 364 aa12.17□□□□□ -0.46
CHD3-216ENST00000573936 COG5Q9UP83 839 aa12.17□□□□□ -0.46
CHD3-216ENST00000573936 PIN4Q9Y237 131 aaKnown RBP12.17□□□□□ -0.46
CHD3-216ENST00000573936 A0A087X0B3 334 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 A0A0U1RQF3 1178 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 A0A1W2PQ27 194 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 A0A1W2PQ64 194 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 A0A1W2PQD8 194 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 C9IYK1 514 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 RBAK-RBAKDNI3L0D1 243 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 K7ERI5 159 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 POLR2DO15514 142 aaKnown RBP12.16□□□□□ -0.46
CHD3-216ENST00000573936 HOXA2O43364 376 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 TBCAO75347 108 aaKnown RBP12.16□□□□□ -0.46
CHD3-216ENST00000573936 FAM13AO94988 1023 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 ARHGEF15O94989 841 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 EOMESO95936 686 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 ABCD1P33897 745 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 NPTX2P47972 431 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 RAB27AP51159 221 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 RAD51AP2Q09MP3 1159 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 MAPK7Q13164 816 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 GIT2Q14161 759 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 NAALADL2Q58DX5 795 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 TWF2Q6IBS0 349 aaKnown RBP12.16□□□□□ -0.46
CHD3-216ENST00000573936 NOTUMQ6P988 496 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 CEP57L1Q8IYX8 460 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 DAW1Q8N136 415 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 LRRC15Q8TF66 581 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 SPIRE2Q8WWL2 714 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 BSNDQ8WZ55 320 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 DDX12PQ92771 950 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 DHX58Q96C10 678 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 YME1L1Q96TA2 773 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 TNMDQ9H2S6 317 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 FZD8Q9H461 694 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 PARVGQ9HBI0 331 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 POLD4Q9HCU8 107 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 TMEM161AQ9NX61 479 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 USP25Q9UHP3 1055 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 KCNH3Q9ULD8 1083 aa12.16□□□□□ -0.46
CHD3-216ENST00000573936 BRWD1Q9NSI6 2320 aa12.15□□□□□ -0.46
CHD3-216ENST00000573936 NPHP3-ACAD11A0A0J9YXS1 232 aa12.15□□□□□ -0.46
CHD3-216ENST00000573936 GOLGA6L4A6NEF3 574 aa12.15□□□□□ -0.46
CHD3-216ENST00000573936 EPOPA6NHQ4 379 aa12.15□□□□□ -0.46
CHD3-216ENST00000573936 SFI1A8K8P3 1242 aa12.15□□□□□ -0.46
CHD3-216ENST00000573936 RFXAPO00287 272 aa12.15□□□□□ -0.46
CHD3-216ENST00000573936 ACKR2O00590 384 aa12.15□□□□□ -0.46
CHD3-216ENST00000573936 PRKCBP05771 671 aa12.15□□□□□ -0.46
CHD3-216ENST00000573936 ZNF131P52739 623 aa12.15□□□□□ -0.46
CHD3-216ENST00000573936 HTRA4P83105 476 aaPredicted RBP12.15□□□□□ -0.46
CHD3-216ENST00000573936 E2F4Q16254 413 aa12.15□□□□□ -0.46
CHD3-216ENST00000573936 TMEM31Q5JXX7 168 aa12.15□□□□□ -0.46
CHD3-216ENST00000573936 FAM117BQ6P1L5 589 aa12.15□□□□□ -0.46
CHD3-216ENST00000573936 ECHDC2Q86YB7 292 aa12.15□□□□□ -0.46
CHD3-216ENST00000573936 MYCT1Q8N699 235 aa12.15□□□□□ -0.46
CHD3-216ENST00000573936 CNNM3Q8NE01 707 aa12.15□□□□□ -0.46
CHD3-216ENST00000573936 ARNTL2Q8WYA1 636 aa12.15□□□□□ -0.46
CHD3-216ENST00000573936 RSPH1Q8WYR4 309 aa12.15□□□□□ -0.46
CHD3-216ENST00000573936 HLA-CQ95604 372 aa12.15□□□□□ -0.46
CHD3-216ENST00000573936 PGBD4Q96DM1 585 aa12.15□□□□□ -0.46
CHD3-216ENST00000573936 REEP2Q9BRK0 252 aa12.15□□□□□ -0.46
CHD3-216ENST00000573936 ARIH1Q9Y4X5 557 aaPredicted RBP12.15□□□□□ -0.46
CHD3-216ENST00000573936 MYMKA6NI61 221 aa12.14□□□□□ -0.47
CHD3-216ENST00000573936 N4BP3O15049 544 aa12.14□□□□□ -0.47
CHD3-216ENST00000573936 TSPAN1O60635 241 aa12.14□□□□□ -0.47
CHD3-216ENST00000573936 ZNF623O75123 536 aa12.14□□□□□ -0.47
CHD3-216ENST00000573936 DGKIO75912 1065 aa12.14□□□□□ -0.47
CHD3-216ENST00000573936 GAP43P17677 238 aa12.14□□□□□ -0.47
CHD3-216ENST00000573936 HOXA11P31270 313 aaPredicted RBP12.14□□□□□ -0.47
CHD3-216ENST00000573936 HOXD11P31277 338 aaPredicted RBP12.14□□□□□ -0.47
CHD3-216ENST00000573936 STRN3Q13033 797 aa12.14□□□□□ -0.47
CHD3-216ENST00000573936 PRPF4BQ13523 1007 aaKnown RBP12.14□□□□□ -0.47
CHD3-216ENST00000573936 AMHR2Q16671 573 aa12.14□□□□□ -0.47
CHD3-216ENST00000573936 TMEM132AQ24JP5 1023 aa12.14□□□□□ -0.47
CHD3-216ENST00000573936 DYMQ7RTS9 669 aa12.14□□□□□ -0.47
CHD3-216ENST00000573936 APBB1IPQ7Z5R6 666 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms