RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 PARP9Q8IXQ6 854 aa16.87■□□□□ 0.29
NUP88-207ENST00000573584 HVCN1Q96D96 273 aa16.87■□□□□ 0.29
NUP88-207ENST00000573584 ZSWIM1Q9BR11 485 aa16.87■□□□□ 0.29
NUP88-207ENST00000573584 KDM4CQ9H3R0 1056 aa16.87■□□□□ 0.29
NUP88-207ENST00000573584 WRAP73Q9P2S5 460 aaPredicted RBP16.87■□□□□ 0.29
NUP88-207ENST00000573584 ODF2LQ9ULJ1 636 aa16.87■□□□□ 0.29
NUP88-207ENST00000573584 ADAMTSL1Q8N6G6 1762 aa16.87■□□□□ 0.29
NUP88-207ENST00000573584 TRIM37O94972 964 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 UBXN2AP68543 259 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 GPC5P78333 572 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 BTNL9Q6UXG8 535 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 CCDC197Q8NCU1 140 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 BANK1Q8NDB2 785 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 UHMK1Q8TAS1 419 aaKnown RBP16.86■□□□□ 0.29
NUP88-207ENST00000573584 SLC5A5Q92911 643 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 ADAM7Q9H2U9 754 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 MTRF1LQ9UGC7 380 aaKnown RBP16.86■□□□□ 0.29
NUP88-207ENST00000573584 CHORDC1Q9UHD1 332 aaPredicted RBP16.86■□□□□ 0.29
NUP88-207ENST00000573584 PCYOX1Q9UHG3 505 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 LTBP1Q14766 1721 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 DLG4P78352 724 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 C6orf118Q5T5N4 469 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 TTC27Q6P3X3 843 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 CCDC137Q6PK04 289 aaKnown RBP16.86■□□□□ 0.29
NUP88-207ENST00000573584 SLC9A9Q8IVB4 645 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 SGSM3Q96HU1 749 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 IDI2Q9BXS1 227 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 DBNDD1Q9H9R9 158 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 CNOT7Q9UIV1 285 aaKnown RBP16.86■□□□□ 0.29
NUP88-207ENST00000573584 PFASO15067 1338 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 EMSYQ7Z589 1322 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 QSER1Q2KHR3 1735 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 GH2P01242 217 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 COMTP21964 271 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 CTNNA2P26232 953 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 CETN1Q12798 172 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 MESDQ14696 234 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 SNCBQ16143 134 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 ZNF746Q6NUN9 644 aaPredicted RBP16.86■□□□□ 0.29
NUP88-207ENST00000573584 RPUSD2Q8IZ73 545 aaKnown RBP16.86■□□□□ 0.29
NUP88-207ENST00000573584 ZDHHC14Q8IZN3 488 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 ANKS4BQ8N8V4 417 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 ATXN2LQ8WWM7 1075 aaKnown RBP16.86■□□□□ 0.29
NUP88-207ENST00000573584 KCND2Q9NZV8 630 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 PARP2Q9UGN5 583 aa16.86■□□□□ 0.29
NUP88-207ENST00000573584 LY75O60449 1722 aa16.85■□□□□ 0.29
NUP88-207ENST00000573584 GBP1P32455 592 aa16.85■□□□□ 0.29
NUP88-207ENST00000573584 JAG1P78504 1218 aa16.85■□□□□ 0.29
NUP88-207ENST00000573584 ARHGEF19Q8IW93 802 aa16.85■□□□□ 0.29
NUP88-207ENST00000573584 PCIF1Q9H4Z3 704 aa16.85■□□□□ 0.29
NUP88-207ENST00000573584 CCT8L1PA6NM43 557 aa16.85■□□□□ 0.29
NUP88-207ENST00000573584 ADCY2Q08462 1091 aa16.85■□□□□ 0.29
NUP88-207ENST00000573584 SF3A3Q12874 501 aaKnown RBP eCLIP16.85■□□□□ 0.29
NUP88-207ENST00000573584 UBAP2Q5T6F2 1119 aaKnown RBP16.85■□□□□ 0.29
NUP88-207ENST00000573584 SEL1L2Q5TEA6 688 aa16.85■□□□□ 0.29
NUP88-207ENST00000573584 RPS6KC1Q96S38 1066 aa16.85■□□□□ 0.29
NUP88-207ENST00000573584 INTS9Q9NV88 658 aaKnown RBP16.85■□□□□ 0.29
NUP88-207ENST00000573584 TRPC6Q9Y210 931 aa16.85■□□□□ 0.29
NUP88-207ENST00000573584 A0A1W2PRG0 241 aa16.84■□□□□ 0.29
NUP88-207ENST00000573584 HIP1RO75146 1068 aa16.84■□□□□ 0.29
NUP88-207ENST00000573584 AGTP01019 485 aa16.84■□□□□ 0.29
NUP88-207ENST00000573584 GHRP10912 638 aa16.84■□□□□ 0.29
NUP88-207ENST00000573584 FGFR4P22455 802 aa16.84■□□□□ 0.29
NUP88-207ENST00000573584 SLCO1A2P46721 670 aa16.84■□□□□ 0.29
NUP88-207ENST00000573584 PEX5P50542 639 aa16.84■□□□□ 0.29
NUP88-207ENST00000573584 XRCC4Q13426 336 aa16.84■□□□□ 0.29
NUP88-207ENST00000573584 ZNF577Q9BSK1 485 aa16.84■□□□□ 0.29
NUP88-207ENST00000573584 USP21Q9UK80 565 aa16.84■□□□□ 0.29
NUP88-207ENST00000573584 ARHGEF35A5YM69 484 aa16.84■□□□□ 0.29
NUP88-207ENST00000573584 ASAP2O43150 1006 aa16.84■□□□□ 0.29
NUP88-207ENST00000573584 POLR2MP0CAP2 368 aa16.84■□□□□ 0.29
NUP88-207ENST00000573584 CEP55Q53EZ4 464 aa16.84■□□□□ 0.29
NUP88-207ENST00000573584 RBM26Q5T8P6 1007 aaKnown RBP16.84■□□□□ 0.29
NUP88-207ENST00000573584 INTS8Q75QN2 995 aaKnown RBP16.84■□□□□ 0.29
NUP88-207ENST00000573584 MAEAQ7L5Y9 396 aa16.84■□□□□ 0.29
NUP88-207ENST00000573584 CROCCP2Q86T23 111 aa16.84■□□□□ 0.29
NUP88-207ENST00000573584 TAX1BP1Q86VP1 789 aa16.84■□□□□ 0.29
NUP88-207ENST00000573584 COL23A1Q86Y22 540 aaPredicted RBP16.84■□□□□ 0.29
NUP88-207ENST00000573584 CCDC105Q8IYK2 499 aa16.84■□□□□ 0.29
NUP88-207ENST00000573584 EPS8L3Q8TE67 593 aaKnown RBP16.84■□□□□ 0.29
NUP88-207ENST00000573584 PRMT1Q99873 361 aaKnown RBP16.84■□□□□ 0.29
NUP88-207ENST00000573584 STRA6Q9BX79 667 aa16.84■□□□□ 0.29
NUP88-207ENST00000573584 UNC45AQ9H3U1 944 aa16.84■□□□□ 0.29
NUP88-207ENST00000573584 PTPN22Q9Y2R2 807 aa16.84■□□□□ 0.29
NUP88-207ENST00000573584 PCDHA3Q9Y5H8 950 aa16.84■□□□□ 0.29
NUP88-207ENST00000573584 GGPS1O95749 300 aa16.83■□□□□ 0.29
NUP88-207ENST00000573584 PYGMP11217 842 aa16.83■□□□□ 0.29
NUP88-207ENST00000573584 MUTP22033 750 aa16.83■□□□□ 0.29
NUP88-207ENST00000573584 GCLMP48507 274 aa16.83■□□□□ 0.29
NUP88-207ENST00000573584 PPP3CAQ08209 521 aa16.83■□□□□ 0.29
NUP88-207ENST00000573584 TCEAL1Q15170 157 aa16.83■□□□□ 0.29
NUP88-207ENST00000573584 CCDC50Q8IVM0 306 aa16.83■□□□□ 0.29
NUP88-207ENST00000573584 LRRC34Q8IZ02 419 aa16.83■□□□□ 0.29
NUP88-207ENST00000573584 LXNQ9BS40 222 aa16.83■□□□□ 0.29
NUP88-207ENST00000573584 K7ENM7 598 aa16.83■□□□□ 0.28
NUP88-207ENST00000573584 RTN2O75298 545 aa16.83■□□□□ 0.28
NUP88-207ENST00000573584 VAMP7P51809 220 aa16.83■□□□□ 0.28
NUP88-207ENST00000573584 STAT2P52630 851 aa16.83■□□□□ 0.28
NUP88-207ENST00000573584 MYBPC2Q14324 1141 aa16.83■□□□□ 0.28
NUP88-207ENST00000573584 SLMAPQ14BN4 828 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms