RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 FSCN2O14926 492 aa14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 MBTPS2O43462 519 aa14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 ITGA4P13612 1032 aa14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 AXLP30530 894 aa14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 MCM2P49736 904 aa14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 TOB1P50616 345 aaPredicted RBP14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 FXR2P51116 673 aaKnown RBP eCLIP14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 RBM10P98175 930 aaKnown RBP14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 MBTD1Q05BQ5 628 aa14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 PTGDRQ13258 359 aa14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 PCBP1Q15365 356 aaKnown RBP eCLIP14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 UBXN11Q5T124 520 aa14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 PADI6Q6TGC4 694 aa14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 AGMOQ6ZNB7 445 aa14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 MCPH1Q8NEM0 835 aa14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 RSPH1Q8WYR4 309 aa14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 TMEM169Q96HH4 297 aa14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 FAM193BQ96PV7 902 aaPredicted RBP14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 APOL6Q9BWW8 343 aa14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 EIF2AQ9BY44 585 aaKnown RBP14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 RAB34Q9BZG1 259 aa14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 TRIM6Q9C030 488 aaPredicted RBP14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 NGRNQ9NPE2 291 aaKnown RBP14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 CD320Q9NPF0 282 aa14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 SMC3Q9UQE7 1217 aa14.09□□□□□ -0.15
NPLOC4-213ENST00000573519 HIDE1A8MVS5 230 aa14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 GLP2RO95838 553 aa14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 POMCP01189 267 aa14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 SRGAP2BP0DMP2 458 aa14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 LIG1P18858 919 aa14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 NCLP19338 710 aaKnown RBP14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 POU5F1BQ06416 359 aa14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 SMAD4Q13485 552 aaKnown RBP14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 SMC1AQ14683 1233 aaKnown RBP14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 BMS1Q14692 1282 aaKnown RBP14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 SMAD2Q15796 467 aaKnown RBP14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 DUSP6Q16828 381 aa14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 TMEM132AQ24JP5 1023 aa14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 LLGL2Q6P1M3 1020 aa14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 MRPL10Q7Z7H8 261 aaKnown RBP14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 CDR2LQ86X02 465 aaPredicted RBP14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 ZBTB8OSQ8IWT0 167 aa14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 C4orf32Q8N8J7 132 aa14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 SMG8Q8ND04 991 aaKnown RBP14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 CNNM3Q8NE01 707 aa14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 SNX29Q8TEQ0 813 aa14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 CDCA3Q99618 268 aaPredicted RBP14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 NRDE2Q9H7Z3 1164 aa14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 CLEC1BQ9P126 229 aa14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 DNAJB4Q9UDY4 337 aa14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 KIAA1024Q9UPX6 916 aa14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 HES2Q9Y543 173 aa14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 IPPQ9Y573 584 aa14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 CNTNAP2Q9UHC6 1331 aa14.08□□□□□ -0.16
NPLOC4-213ENST00000573519 MUC3AQ02505 3323 aa14.07□□□□□ -0.16
NPLOC4-213ENST00000573519 FSD2A1L4K1 749 aa14.07□□□□□ -0.16
NPLOC4-213ENST00000573519 B4GALT5O43286 388 aa14.07□□□□□ -0.16
NPLOC4-213ENST00000573519 ARF4P18085 180 aaPredicted RBP14.07□□□□□ -0.16
NPLOC4-213ENST00000573519 AFF1P51825 1210 aaKnown RBP14.07□□□□□ -0.16
NPLOC4-213ENST00000573519 ECM1Q16610 540 aa14.07□□□□□ -0.16
NPLOC4-213ENST00000573519 TMEM173Q86WV6 379 aaPredicted RBP14.07□□□□□ -0.16
NPLOC4-213ENST00000573519 ZNF280BQ86YH2 543 aa14.07□□□□□ -0.16
NPLOC4-213ENST00000573519 IFNLR1Q8IU57 520 aaPredicted RBP14.07□□□□□ -0.16
NPLOC4-213ENST00000573519 TMEM87AQ8NBN3 555 aa14.07□□□□□ -0.16
NPLOC4-213ENST00000573519 KHSRPQ92945 711 aaKnown RBP eCLIP14.07□□□□□ -0.16
NPLOC4-213ENST00000573519 CCDC51Q96ER9 411 aa14.07□□□□□ -0.16
NPLOC4-213ENST00000573519 MSLNLQ96KJ4 702 aa14.07□□□□□ -0.16
NPLOC4-213ENST00000573519 C1QTNF1Q9BXJ1 281 aa14.07□□□□□ -0.16
NPLOC4-213ENST00000573519 NFKBIZQ9BYH8 718 aa14.07□□□□□ -0.16
NPLOC4-213ENST00000573519 CSRNP2Q9H175 543 aa14.07□□□□□ -0.16
NPLOC4-213ENST00000573519 BHMT2Q9H2M3 363 aa14.07□□□□□ -0.16
NPLOC4-213ENST00000573519 EPHX3Q9H6B9 360 aa14.07□□□□□ -0.16
NPLOC4-213ENST00000573519 UBN1Q9NPG3 1134 aa14.07□□□□□ -0.16
NPLOC4-213ENST00000573519 DDX19AQ9NUU7 478 aaKnown RBP14.07□□□□□ -0.16
NPLOC4-213ENST00000573519 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.07□□□□□ -0.16
NPLOC4-213ENST00000573519 PP2D1A8MPX8 630 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 LAD1O00515 517 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 DDHD2O94830 711 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 NPTXRO95502 500 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 GALTP07902 379 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 CYP11B2P19099 503 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 MUTP22033 750 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 MLH1P40692 756 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 SLC11A1P49279 550 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 ZP2Q05996 745 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 COASYQ13057 564 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 PDIA5Q14554 519 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 ZRSR1Q15695 479 aaKnown RBP14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 AMHR2Q16671 573 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 RILPL1Q5EBL4 403 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 KRT79Q5XKE5 535 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 DTHD1Q6ZMT9 781 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 ADHFE1Q8IWW8 467 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 HACE1Q8IYU2 909 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 VPS52Q8N1B4 723 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 VN1R2Q8NFZ6 395 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 AUTS2Q8WXX7 1259 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 IGSF21Q96ID5 467 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 APOL5Q9BWW9 433 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 RNF39Q9H2S5 420 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms