RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 EPHX3Q9H6B9 360 aa19.25■□□□□ 0.67
SMG6-212ENST00000573153 DNAJB4Q9UDY4 337 aa19.25■□□□□ 0.67
SMG6-212ENST00000573153 BARX2Q9UMQ3 279 aaPredicted RBP19.25■□□□□ 0.67
SMG6-212ENST00000573153 TTLL13PA6NNM8 815 aa19.24■□□□□ 0.67
SMG6-212ENST00000573153 NT5C1B-RDH14C9J2C7 533 aa19.24■□□□□ 0.67
SMG6-212ENST00000573153 DDHD2O94830 711 aa19.24■□□□□ 0.67
SMG6-212ENST00000573153 ARF4P18085 180 aaPredicted RBP19.24■□□□□ 0.67
SMG6-212ENST00000573153 NCLP19338 710 aaKnown RBP19.24■□□□□ 0.67
SMG6-212ENST00000573153 COASYQ13057 564 aa19.24■□□□□ 0.67
SMG6-212ENST00000573153 NOMO2Q5JPE7 1267 aa19.24■□□□□ 0.67
SMG6-212ENST00000573153 ABI1Q8IZP0 508 aa19.24■□□□□ 0.67
SMG6-212ENST00000573153 RSPH1Q8WYR4 309 aa19.24■□□□□ 0.67
SMG6-212ENST00000573153 CPB2Q96IY4 423 aa19.24■□□□□ 0.67
SMG6-212ENST00000573153 MMTAG2Q9BU76 263 aaKnown RBP19.24■□□□□ 0.67
SMG6-212ENST00000573153 RNF39Q9H2S5 420 aa19.24■□□□□ 0.67
SMG6-212ENST00000573153 SPG21Q9NZD8 308 aa19.24■□□□□ 0.67
SMG6-212ENST00000573153 NOL7Q9UMY1 257 aaKnown RBP19.24■□□□□ 0.67
SMG6-212ENST00000573153 EFEMP2O95967 443 aa19.23■□□□□ 0.67
SMG6-212ENST00000573153 GALTP07902 379 aa19.23■□□□□ 0.67
SMG6-212ENST00000573153 SKIP12755 728 aa19.23■□□□□ 0.67
SMG6-212ENST00000573153 PPM1AP35813 382 aa19.23■□□□□ 0.67
SMG6-212ENST00000573153 SLC11A1P49279 550 aa19.23■□□□□ 0.67
SMG6-212ENST00000573153 PTGDRQ13258 359 aa19.23■□□□□ 0.67
SMG6-212ENST00000573153 SMAD4Q13485 552 aaKnown RBP19.23■□□□□ 0.67
SMG6-212ENST00000573153 GNL2Q13823 731 aaKnown RBP19.23■□□□□ 0.67
SMG6-212ENST00000573153 PCBP1Q15365 356 aaKnown RBP eCLIP19.23■□□□□ 0.67
SMG6-212ENST00000573153 TMEM184AQ6ZMB5 413 aa19.23■□□□□ 0.67
SMG6-212ENST00000573153 GJD3Q8N144 294 aa19.23■□□□□ 0.67
SMG6-212ENST00000573153 GSTCDQ8NEC7 633 aa19.23■□□□□ 0.67
SMG6-212ENST00000573153 TCF25Q9BQ70 676 aa19.23■□□□□ 0.67
SMG6-212ENST00000573153 CD207Q9UJ71 328 aa19.23■□□□□ 0.67
SMG6-212ENST00000573153 IPPQ9Y573 584 aa19.23■□□□□ 0.67
SMG6-212ENST00000573153 PP2D1A8MPX8 630 aa19.22■□□□□ 0.67
SMG6-212ENST00000573153 MUTP22033 750 aa19.22■□□□□ 0.67
SMG6-212ENST00000573153 GJB2P29033 226 aa19.22■□□□□ 0.67
SMG6-212ENST00000573153 PLPP4Q5VZY2 271 aa19.22■□□□□ 0.67
SMG6-212ENST00000573153 PDE12Q6L8Q7 609 aaKnown RBP19.22■□□□□ 0.67
SMG6-212ENST00000573153 GLB1LQ6UWU2 654 aa19.22■□□□□ 0.67
SMG6-212ENST00000573153 PPP4R3CPQ6ZMV5 832 aa19.22■□□□□ 0.67
SMG6-212ENST00000573153 NACC1Q96RE7 527 aa19.22■□□□□ 0.67
SMG6-212ENST00000573153 BACH2Q9BYV9 841 aa19.22■□□□□ 0.67
SMG6-212ENST00000573153 CCDC113Q9H0I3 377 aa19.22■□□□□ 0.67
SMG6-212ENST00000573153 ZBP1Q9H171 429 aa19.22■□□□□ 0.67
SMG6-212ENST00000573153 RSAD1Q9HA92 442 aa19.22■□□□□ 0.67
SMG6-212ENST00000573153 MIOSQ9NXC5 875 aa19.22■□□□□ 0.67
SMG6-212ENST00000573153 HES2Q9Y543 173 aa19.22■□□□□ 0.67
SMG6-212ENST00000573153 C2orf71A6NGG8 1288 aa19.21■□□□□ 0.67
SMG6-212ENST00000573153 INO80B-WBP1J3KQ70 363 aa19.21■□□□□ 0.67
SMG6-212ENST00000573153 CYP11B2P19099 503 aa19.21■□□□□ 0.67
SMG6-212ENST00000573153 AXLP30530 894 aa19.21■□□□□ 0.67
SMG6-212ENST00000573153 PADI6Q6TGC4 694 aa19.21■□□□□ 0.67
SMG6-212ENST00000573153 EP400NLQ6ZTU2 488 aa19.21■□□□□ 0.67
SMG6-212ENST00000573153 KCNK18Q7Z418 384 aa19.21■□□□□ 0.67
SMG6-212ENST00000573153 ADHFE1Q8IWW8 467 aa19.21■□□□□ 0.67
SMG6-212ENST00000573153 RNF168Q8IYW5 571 aaPredicted RBP19.21■□□□□ 0.67
SMG6-212ENST00000573153 SUSD6Q92537 303 aa19.21■□□□□ 0.67
SMG6-212ENST00000573153 CCDC51Q96ER9 411 aa19.21■□□□□ 0.67
SMG6-212ENST00000573153 IGSF21Q96ID5 467 aa19.21■□□□□ 0.67
SMG6-212ENST00000573153 CSRNP2Q9H175 543 aa19.21■□□□□ 0.67
SMG6-212ENST00000573153 S1PR5Q9H228 398 aa19.21■□□□□ 0.67
SMG6-212ENST00000573153 FZD8Q9H461 694 aa19.21■□□□□ 0.67
SMG6-212ENST00000573153 TLE6Q9H808 572 aa19.21■□□□□ 0.67
SMG6-212ENST00000573153 MARCH5Q9NX47 278 aa19.21■□□□□ 0.67
SMG6-212ENST00000573153 PRKAG3Q9UGI9 489 aa19.21■□□□□ 0.67
SMG6-212ENST00000573153 INPP5FQ9Y2H2 1132 aa19.21■□□□□ 0.67
SMG6-212ENST00000573153 CNTNAP2Q9UHC6 1331 aa19.21■□□□□ 0.67
SMG6-212ENST00000573153 A0A1B0GUA9 196 aa19.2■□□□□ 0.66
SMG6-212ENST00000573153 PI4K2BG5E9Z4 385 aa19.2■□□□□ 0.66
SMG6-212ENST00000573153 LAD1O00515 517 aa19.2■□□□□ 0.66
SMG6-212ENST00000573153 ZC3H11AO75152 810 aaKnown RBP eCLIP19.2■□□□□ 0.66
SMG6-212ENST00000573153 NDUFV1P49821 464 aa19.2■□□□□ 0.66
SMG6-212ENST00000573153 ATP2C1P98194 919 aaPredicted RBP19.2■□□□□ 0.66
SMG6-212ENST00000573153 DSC1Q08554 894 aa19.2■□□□□ 0.66
SMG6-212ENST00000573153 TFDP1Q14186 410 aa19.2■□□□□ 0.66
SMG6-212ENST00000573153 PDIA5Q14554 519 aa19.2■□□□□ 0.66
SMG6-212ENST00000573153 FAM187BQ17R55 369 aa19.2■□□□□ 0.66
SMG6-212ENST00000573153 SYCE2Q6PIF2 218 aa19.2■□□□□ 0.66
SMG6-212ENST00000573153 MAEAQ7L5Y9 396 aa19.2■□□□□ 0.66
SMG6-212ENST00000573153 CDR2LQ86X02 465 aaPredicted RBP19.2■□□□□ 0.66
SMG6-212ENST00000573153 DAW1Q8N136 415 aa19.2■□□□□ 0.66
SMG6-212ENST00000573153 MRPL43Q8N983 215 aaKnown RBP19.2■□□□□ 0.66
SMG6-212ENST00000573153 MCPH1Q8NEM0 835 aa19.2■□□□□ 0.66
SMG6-212ENST00000573153 ERMNQ8TAM6 284 aa19.2■□□□□ 0.66
SMG6-212ENST00000573153 FEZF2Q8TBJ5 459 aa19.2■□□□□ 0.66
SMG6-212ENST00000573153 PGBD4Q96DM1 585 aa19.2■□□□□ 0.66
SMG6-212ENST00000573153 CDCA3Q99618 268 aaPredicted RBP19.2■□□□□ 0.66
SMG6-212ENST00000573153 NXF3Q9H4D5 531 aaKnown RBP19.2■□□□□ 0.66
SMG6-212ENST00000573153 NGRNQ9NPE2 291 aaKnown RBP19.2■□□□□ 0.66
SMG6-212ENST00000573153 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.2■□□□□ 0.66
SMG6-212ENST00000573153 IRAK3Q9Y616 596 aa19.2■□□□□ 0.66
SMG6-212ENST00000573153 CDC25AP30304 524 aa19.19■□□□□ 0.66
SMG6-212ENST00000573153 PRPHP41219 470 aa19.19■□□□□ 0.66
SMG6-212ENST00000573153 CUL4AQ13619 759 aa19.19■□□□□ 0.66
SMG6-212ENST00000573153 NOTUMQ6P988 496 aa19.19■□□□□ 0.66
SMG6-212ENST00000573153 COLGALT2Q8IYK4 626 aa19.19■□□□□ 0.66
SMG6-212ENST00000573153 PPP2R3CQ969Q6 453 aa19.19■□□□□ 0.66
SMG6-212ENST00000573153 POLD4Q9HCU8 107 aa19.19■□□□□ 0.66
SMG6-212ENST00000573153 USP20Q9Y2K6 914 aa19.19■□□□□ 0.66
SMG6-212ENST00000573153 USP15Q9Y4E8 981 aaPredicted RBP19.19■□□□□ 0.66
SMG6-212ENST00000573153 STK24Q9Y6E0 443 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms