RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 MRPL17Q9NRX2 175 aaKnown RBP11.05□□□□□ -0.64
TRAPPC1-205ENST00000572656 DDX25Q9UHL0 483 aaKnown RBP11.05□□□□□ -0.64
TRAPPC1-205ENST00000572656 FAN1Q9Y2M0 1017 aa11.05□□□□□ -0.64
TRAPPC1-205ENST00000572656 CNTNAP2Q9UHC6 1331 aa11.05□□□□□ -0.64
TRAPPC1-205ENST00000572656 PRR23AA6NEV1 266 aa11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 CPLX1O14810 134 aa11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 SLC37A4O43826 429 aa11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 SSBP05455 408 aaKnown RBP eCLIP11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 P4HBP07237 508 aaKnown RBP11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 SRGAP2CP0DJJ0 459 aa11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 HOXA11P31270 313 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 RFC5P40937 340 aa11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 AFF1P51825 1210 aaKnown RBP11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 NPEPPSP55786 919 aa11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 LAMTOR4Q0VGL1 99 aa11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 PPP2R5CQ13362 524 aa11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 TOB2Q14106 344 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 NPY5RQ15761 445 aa11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 INF2Q27J81 1249 aa11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 UBXN11Q5T124 520 aa11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 C15orf39Q6ZRI6 1047 aa11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 RUFY3Q7L099 469 aa11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 KRT25Q7Z3Z0 450 aa11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 ZNF579Q8NAF0 562 aaKnown RBP11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 CMASQ8NFW8 434 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 PSPC1Q8WXF1 523 aaKnown RBP11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 TMEM143Q96AN5 459 aa11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 ZNF274Q96GC6 653 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 CEP170P1Q96L14 293 aa11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 FAM20AQ96MK3 541 aa11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 SLKQ9H2G2 1235 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 DHX33Q9H6R0 707 aaKnown RBP11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 MINDY3Q9H8M7 445 aa11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 KCNK12Q9HB15 430 aa11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 ZSWIM6Q9HCJ5 1215 aa11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 KCNMB3Q9NPA1 279 aa11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 UBN1Q9NPG3 1134 aa11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 VAV3Q9UKW4 847 aa11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 SSX2IPQ9Y2D8 614 aa11.04□□□□□ -0.64
TRAPPC1-205ENST00000572656 NRP1O14786 923 aa11.03□□□□□ -0.64
TRAPPC1-205ENST00000572656 ASAP2O43150 1006 aa11.03□□□□□ -0.64
TRAPPC1-205ENST00000572656 REC8O95072 547 aa11.03□□□□□ -0.64
TRAPPC1-205ENST00000572656 SOD2P04179 222 aa11.03□□□□□ -0.64
TRAPPC1-205ENST00000572656 NPR3P17342 541 aa11.03□□□□□ -0.64
TRAPPC1-205ENST00000572656 NCLP19338 710 aaKnown RBP11.03□□□□□ -0.64
TRAPPC1-205ENST00000572656 AOC1P19801 751 aa11.03□□□□□ -0.64
TRAPPC1-205ENST00000572656 LETM2Q2VYF4 491 aa11.03□□□□□ -0.64
TRAPPC1-205ENST00000572656 CWF19L1Q69YN2 538 aaKnown RBP11.03□□□□□ -0.64
TRAPPC1-205ENST00000572656 PPP4R3AQ6IN85 833 aa11.03□□□□□ -0.64
TRAPPC1-205ENST00000572656 CPLX2Q6PUV4 134 aaKnown RBP11.03□□□□□ -0.64
TRAPPC1-205ENST00000572656 CNNM3Q8NE01 707 aa11.03□□□□□ -0.64
TRAPPC1-205ENST00000572656 FLCNQ8NFG4 579 aa11.03□□□□□ -0.64
TRAPPC1-205ENST00000572656 RPS6KC1Q96S38 1066 aa11.03□□□□□ -0.64
TRAPPC1-205ENST00000572656 RHOBTB2Q9BYZ6 727 aa11.03□□□□□ -0.64
TRAPPC1-205ENST00000572656 IGSF9Q9P2J2 1179 aa11.03□□□□□ -0.64
TRAPPC1-205ENST00000572656 WRAP73Q9P2S5 460 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC1-205ENST00000572656 DPP7Q9UHL4 492 aa11.03□□□□□ -0.64
TRAPPC1-205ENST00000572656 DUSP12Q9UNI6 340 aa11.03□□□□□ -0.64
TRAPPC1-205ENST00000572656 CCDC194A0A1B0GVG4 234 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 INPPL1O15357 1258 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 PI15O43692 258 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 GAS2O43903 313 aaKnown RBP11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 POMCP01189 267 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 URODP06132 367 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 ADH1AP07327 375 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 ITGA4P13612 1032 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 GCFC2P16383 781 aaKnown RBP11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 YWHABP31946 246 aaKnown RBP11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 AK2P54819 239 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 FOXK2Q01167 660 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 PCBP1Q15365 356 aaKnown RBP eCLIP11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 EPHA7Q15375 998 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 ELMSAN1Q6PJG2 1045 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 CYP26C1Q6V0L0 522 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 OTUD6AQ7L8S5 288 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 TAS1R1Q7RTX1 841 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 FRMD5Q7Z6J6 570 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 C4orf19Q8IY42 314 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 COLGALT2Q8IYK4 626 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 RNF149Q8NC42 400 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 SMG8Q8ND04 991 aaKnown RBP11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 TCP11Q8WWU5 503 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 NKD2Q969F2 451 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 AIFM3Q96NN9 605 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 RTP3Q9BQQ7 232 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 HERC2P3Q9BVR0 1158 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 MAN1C1Q9NR34 630 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 MARCH5Q9NX47 278 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 FBXL21Q9UKT6 434 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 PRG3Q9Y2Y8 225 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 CYP46A1Q9Y6A2 500 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 EVPLQ92817 2033 aa11.02□□□□□ -0.65
TRAPPC1-205ENST00000572656 CACNA1HO95180 2353 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 CCDC195A0A1B0GUA6 201 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 ARL5CA6NH57 179 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 C2CD2LO14523 706 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 TBX3O15119 743 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 TEX28O15482 410 aa11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 EPB41L2O43491 1005 aaKnown RBP11.01□□□□□ -0.65
TRAPPC1-205ENST00000572656 ERLIN2O94905 339 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms