RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 PGBD4Q96DM1 585 aa11.45□□□□□ -0.58
CHMP6-203ENST00000572525 IER2Q9BTL4 223 aa11.45□□□□□ -0.58
CHMP6-203ENST00000572525 GCOM2Q9BZD3 368 aaPredicted RBP11.45□□□□□ -0.58
CHMP6-203ENST00000572525 LNPKQ9C0E8 428 aa11.45□□□□□ -0.58
CHMP6-203ENST00000572525 FAM105AQ9NUU6 356 aa11.45□□□□□ -0.58
CHMP6-203ENST00000572525 DNAJB4Q9UDY4 337 aa11.45□□□□□ -0.58
CHMP6-203ENST00000572525 GMEB2Q9UKD1 530 aa11.45□□□□□ -0.58
CHMP6-203ENST00000572525 COL4A2P08572 1712 aa11.44□□□□□ -0.58
CHMP6-203ENST00000572525 IGLV3-22A0A075B6J6 115 aa11.44□□□□□ -0.58
CHMP6-203ENST00000572525 DCDC2BA2VCK2 349 aa11.44□□□□□ -0.58
CHMP6-203ENST00000572525 NCAM2O15394 837 aa11.44□□□□□ -0.58
CHMP6-203ENST00000572525 TEX28O15482 410 aa11.44□□□□□ -0.58
CHMP6-203ENST00000572525 ALDH2P05091 517 aa11.44□□□□□ -0.58
CHMP6-203ENST00000572525 LIFRP42702 1097 aa11.44□□□□□ -0.58
CHMP6-203ENST00000572525 CLK2P49760 499 aaKnown RBP11.44□□□□□ -0.58
CHMP6-203ENST00000572525 SHC2P98077 582 aa11.44□□□□□ -0.58
CHMP6-203ENST00000572525 AAMPQ13685 434 aa11.44□□□□□ -0.58
CHMP6-203ENST00000572525 LAIR1Q6GTX8 287 aa11.44□□□□□ -0.58
CHMP6-203ENST00000572525 TWF2Q6IBS0 349 aaKnown RBP11.44□□□□□ -0.58
CHMP6-203ENST00000572525 MTSS1LQ765P7 747 aa11.44□□□□□ -0.58
CHMP6-203ENST00000572525 ZNF410Q86VK4 478 aa11.44□□□□□ -0.58
CHMP6-203ENST00000572525 URGCPQ8TCY9 931 aa11.44□□□□□ -0.58
CHMP6-203ENST00000572525 TMEM87BQ96K49 555 aa11.44□□□□□ -0.58
CHMP6-203ENST00000572525 PRKD2Q9BZL6 878 aa11.44□□□□□ -0.58
CHMP6-203ENST00000572525 NT5C3AQ9H0P0 336 aa11.44□□□□□ -0.58
CHMP6-203ENST00000572525 LTB4R2Q9NPC1 389 aa11.44□□□□□ -0.58
CHMP6-203ENST00000572525 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.44□□□□□ -0.58
CHMP6-203ENST00000572525 TCEAL9Q9UHQ7 104 aa11.44□□□□□ -0.58
CHMP6-203ENST00000572525 USP18Q9UMW8 372 aa11.44□□□□□ -0.58
CHMP6-203ENST00000572525 NUMBLQ9Y6R0 609 aa11.44□□□□□ -0.58
CHMP6-203ENST00000572525 DDX39AO00148 427 aaKnown RBP11.43□□□□□ -0.58
CHMP6-203ENST00000572525 B4GALT3O60512 393 aa11.43□□□□□ -0.58
CHMP6-203ENST00000572525 OATP04181 439 aa11.43□□□□□ -0.58
CHMP6-203ENST00000572525 GLUD2P49448 558 aa11.43□□□□□ -0.58
CHMP6-203ENST00000572525 NRLP54845 237 aa11.43□□□□□ -0.58
CHMP6-203ENST00000572525 DSG1Q02413 1049 aa11.43□□□□□ -0.58
CHMP6-203ENST00000572525 CREMQ03060 361 aa11.43□□□□□ -0.58
CHMP6-203ENST00000572525 TARBP2Q15633 366 aaKnown RBP11.43□□□□□ -0.58
CHMP6-203ENST00000572525 PPM1JQ5JR12 505 aa11.43□□□□□ -0.58
CHMP6-203ENST00000572525 TMTC3Q6ZXV5 915 aa11.43□□□□□ -0.58
CHMP6-203ENST00000572525 MRPL10Q7Z7H8 261 aaKnown RBP11.43□□□□□ -0.58
CHMP6-203ENST00000572525 PLA2G4DQ86XP0 818 aa11.43□□□□□ -0.58
CHMP6-203ENST00000572525 LRRC71Q8N4P6 559 aa11.43□□□□□ -0.58
CHMP6-203ENST00000572525 NLRP7Q8WX94 980 aa11.43□□□□□ -0.58
CHMP6-203ENST00000572525 PHKBQ93100 1093 aa11.43□□□□□ -0.58
CHMP6-203ENST00000572525 CHAMP1Q96JM3 812 aa11.43□□□□□ -0.58
CHMP6-203ENST00000572525 SCLT1Q96NL6 688 aa11.43□□□□□ -0.58
CHMP6-203ENST00000572525 IL25Q9H293 177 aa11.43□□□□□ -0.58
CHMP6-203ENST00000572525 PARD6AQ9NPB6 346 aa11.43□□□□□ -0.58
CHMP6-203ENST00000572525 NRBP2Q9NSY0 501 aa11.43□□□□□ -0.58
CHMP6-203ENST00000572525 FNIP2Q9P278 1114 aa11.43□□□□□ -0.58
CHMP6-203ENST00000572525 FAN1Q9Y2M0 1017 aa11.43□□□□□ -0.58
CHMP6-203ENST00000572525 ARID2Q68CP9 1835 aa11.43□□□□□ -0.58
CHMP6-203ENST00000572525 VWA8A3KMH1 1905 aa11.43□□□□□ -0.58
CHMP6-203ENST00000572525 SETXQ7Z333 2677 aaKnown RBP11.42□□□□□ -0.58
CHMP6-203ENST00000572525 IGKV6-21A0A0C4DH24 114 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 WDR64B1ANS9 1081 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 FAM86B1E9PN63 330 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 LRRN2O75325 713 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 RFPL2O75678 378 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 POU2F2P09086 479 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 FAM86B2P0C5J1 330 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 ZNF76P36508 570 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 ADCY7P51828 1080 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 GPC5P78333 572 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 CSTF1Q05048 431 aaKnown RBP11.42□□□□□ -0.58
CHMP6-203ENST00000572525 DMWDQ09019 674 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 ZBTB41Q5SVQ8 909 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 LILRA6Q6PI73 481 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 CASC1Q6TDU7 716 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 HEATR3Q7Z4Q2 680 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 ZNF280BQ86YH2 543 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 CELF5Q8N6W0 485 aaKnown RBP11.42□□□□□ -0.58
CHMP6-203ENST00000572525 RUFY2Q8WXA3 655 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 LPPQ93052 612 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 MBOAT7Q96N66 472 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 ZNF577Q9BSK1 485 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 MYL10Q9BUA6 226 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 PIDD1Q9HB75 910 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 CHST7Q9NS84 486 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 GABBR1Q9UBS5 961 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 ANGPTL2Q9UKU9 493 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 COL4A3Q01955 1670 aa11.42□□□□□ -0.58
CHMP6-203ENST00000572525 DMXL2Q8TDJ6 3036 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 CNTNAP5Q8WYK1 1306 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 TICRRQ7Z2Z1 1910 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 CCDC69A6NI79 296 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 SH2B2O14492 632 aaPredicted RBP11.41□□□□□ -0.58
CHMP6-203ENST00000572525 NRP1O14786 923 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 ZNF862O60290 1169 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 DDHD2O94830 711 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 RETP07949 1114 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 HNRNPA1P09651 372 aaKnown RBP eCLIP11.41□□□□□ -0.58
CHMP6-203ENST00000572525 PMLP29590 882 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 HOXA9P31269 272 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 ANP32AP39687 249 aaKnown RBP11.41□□□□□ -0.58
CHMP6-203ENST00000572525 AK2P54819 239 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 NAPAP54920 295 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 UBXN2BQ14CS0 331 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 SLC44A4Q53GD3 710 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms