RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 ANKRD54Q6NXT1 300 aa19.28■□□□□ 0.68
LITAF-211ENST00000572255 VPS52Q8N1B4 723 aa19.28■□□□□ 0.68
LITAF-211ENST00000572255 ASAP3Q8TDY4 903 aa19.28■□□□□ 0.68
LITAF-211ENST00000572255 BCL7CQ8WUZ0 217 aaPredicted RBP19.28■□□□□ 0.68
LITAF-211ENST00000572255 SUSD6Q92537 303 aa19.28■□□□□ 0.68
LITAF-211ENST00000572255 IGSF21Q96ID5 467 aa19.28■□□□□ 0.68
LITAF-211ENST00000572255 ZSCAN31Q96LW9 406 aaPredicted RBP19.28■□□□□ 0.68
LITAF-211ENST00000572255 KIF2CQ99661 725 aa19.28■□□□□ 0.68
LITAF-211ENST00000572255 RSAD1Q9HA92 442 aa19.28■□□□□ 0.68
LITAF-211ENST00000572255 DNAJB4Q9UDY4 337 aa19.28■□□□□ 0.68
LITAF-211ENST00000572255 MUTYHQ9UIF7 546 aa19.28■□□□□ 0.68
LITAF-211ENST00000572255 HCN4Q9Y3Q4 1203 aa19.28■□□□□ 0.68
LITAF-211ENST00000572255 A0A087WWV3 80 aa19.27■□□□□ 0.68
LITAF-211ENST00000572255 LOC730098B7Z3J9 87 aa19.27■□□□□ 0.68
LITAF-211ENST00000572255 B4GALT3O60512 393 aa19.27■□□□□ 0.68
LITAF-211ENST00000572255 TSPAN1O60635 241 aa19.27■□□□□ 0.68
LITAF-211ENST00000572255 CXCL14O95715 111 aa19.27■□□□□ 0.68
LITAF-211ENST00000572255 CA8P35219 290 aa19.27■□□□□ 0.68
LITAF-211ENST00000572255 ARL2P36404 184 aa19.27■□□□□ 0.68
LITAF-211ENST00000572255 SLC11A1P49279 550 aa19.27■□□□□ 0.68
LITAF-211ENST00000572255 HMGN5P82970 282 aaKnown RBP19.27■□□□□ 0.68
LITAF-211ENST00000572255 POU5F1BQ06416 359 aa19.27■□□□□ 0.68
LITAF-211ENST00000572255 CAPSQ13938 189 aa19.27■□□□□ 0.68
LITAF-211ENST00000572255 BMS1Q14692 1282 aaKnown RBP19.27■□□□□ 0.68
LITAF-211ENST00000572255 PCBP1Q15365 356 aaKnown RBP eCLIP19.27■□□□□ 0.68
LITAF-211ENST00000572255 HERC4Q5GLZ8 1057 aaPredicted RBP19.27■□□□□ 0.68
LITAF-211ENST00000572255 SYCE2Q6PIF2 218 aa19.27■□□□□ 0.68
LITAF-211ENST00000572255 ZNF280BQ86YH2 543 aa19.27■□□□□ 0.68
LITAF-211ENST00000572255 IFNLR1Q8IU57 520 aaPredicted RBP19.27■□□□□ 0.68
LITAF-211ENST00000572255 PHF7Q9BWX1 381 aaPredicted RBP19.27■□□□□ 0.68
LITAF-211ENST00000572255 ZBP1Q9H171 429 aa19.27■□□□□ 0.68
LITAF-211ENST00000572255 S1PR5Q9H228 398 aa19.27■□□□□ 0.68
LITAF-211ENST00000572255 FOXP1Q9H334 677 aaPredicted RBP19.27■□□□□ 0.68
LITAF-211ENST00000572255 INO80B-WBP1J3KQ70 363 aa19.26■□□□□ 0.67
LITAF-211ENST00000572255 USO1O60763 962 aaKnown RBP19.26■□□□□ 0.67
LITAF-211ENST00000572255 SPATA31C1P0DKV0 1188 aa19.26■□□□□ 0.67
LITAF-211ENST00000572255 XRCC6P12956 609 aaKnown RBP eCLIP19.26■□□□□ 0.67
LITAF-211ENST00000572255 HOXB8P17481 243 aaPredicted RBP19.26■□□□□ 0.67
LITAF-211ENST00000572255 NCLP19338 710 aaKnown RBP19.26■□□□□ 0.67
LITAF-211ENST00000572255 GLRA2P23416 452 aa19.26■□□□□ 0.67
LITAF-211ENST00000572255 AXLP30530 894 aa19.26■□□□□ 0.67
LITAF-211ENST00000572255 AFF1P51825 1210 aaKnown RBP19.26■□□□□ 0.67
LITAF-211ENST00000572255 NCBP1Q09161 790 aaKnown RBP19.26■□□□□ 0.67
LITAF-211ENST00000572255 ORC2Q13416 577 aaPredicted RBP19.26■□□□□ 0.67
LITAF-211ENST00000572255 C8orf34Q49A92 452 aa19.26■□□□□ 0.67
LITAF-211ENST00000572255 NOTUMQ6P988 496 aa19.26■□□□□ 0.67
LITAF-211ENST00000572255 DDX53Q86TM3 631 aaKnown RBP19.26■□□□□ 0.67
LITAF-211ENST00000572255 SMG8Q8ND04 991 aaKnown RBP19.26■□□□□ 0.67
LITAF-211ENST00000572255 CNNM3Q8NE01 707 aa19.26■□□□□ 0.67
LITAF-211ENST00000572255 FBXO18Q8NFZ0 1043 aa19.26■□□□□ 0.67
LITAF-211ENST00000572255 AUTS2Q8WXX7 1259 aa19.26■□□□□ 0.67
LITAF-211ENST00000572255 CASP10Q92851 521 aa19.26■□□□□ 0.67
LITAF-211ENST00000572255 CCDC51Q96ER9 411 aa19.26■□□□□ 0.67
LITAF-211ENST00000572255 CPB2Q96IY4 423 aa19.26■□□□□ 0.67
LITAF-211ENST00000572255 APOL5Q9BWW9 433 aa19.26■□□□□ 0.67
LITAF-211ENST00000572255 EIF2AQ9BY44 585 aaKnown RBP19.26■□□□□ 0.67
LITAF-211ENST00000572255 POLR3FQ9H1D9 316 aaPredicted RBP19.26■□□□□ 0.67
LITAF-211ENST00000572255 TUFT1Q9NNX1 390 aa19.26■□□□□ 0.67
LITAF-211ENST00000572255 SH2B1Q9NRF2 756 aaPredicted RBP19.26■□□□□ 0.67
LITAF-211ENST00000572255 HCFC2Q9Y5Z7 792 aa19.26■□□□□ 0.67
LITAF-211ENST00000572255 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.25■□□□□ 0.67
LITAF-211ENST00000572255 CLASP2O75122 1294 aaKnown RBP19.25■□□□□ 0.67
LITAF-211ENST00000572255 MED24O75448 989 aa19.25■□□□□ 0.67
LITAF-211ENST00000572255 DDHD2O94830 711 aa19.25■□□□□ 0.67
LITAF-211ENST00000572255 OR52Z1P0C646 297 aa19.25■□□□□ 0.67
LITAF-211ENST00000572255 ITGA4P13612 1032 aa19.25■□□□□ 0.67
LITAF-211ENST00000572255 RBM25P49756 843 aaKnown RBP19.25■□□□□ 0.67
LITAF-211ENST00000572255 MBTD1Q05BQ5 628 aa19.25■□□□□ 0.67
LITAF-211ENST00000572255 CBX2Q14781 532 aaPredicted RBP19.25■□□□□ 0.67
LITAF-211ENST00000572255 ZNF174Q15697 407 aa19.25■□□□□ 0.67
LITAF-211ENST00000572255 AMHR2Q16671 573 aa19.25■□□□□ 0.67
LITAF-211ENST00000572255 CATSPER3Q86XQ3 398 aa19.25■□□□□ 0.67
LITAF-211ENST00000572255 FAM184AQ8NB25 1140 aa19.25■□□□□ 0.67
LITAF-211ENST00000572255 KANSL3Q9P2N6 904 aa19.25■□□□□ 0.67
LITAF-211ENST00000572255 IPPQ9Y573 584 aa19.25■□□□□ 0.67
LITAF-211ENST00000572255 POMCP01189 267 aa19.24■□□□□ 0.67
LITAF-211ENST00000572255 CTSAP10619 480 aa19.24■□□□□ 0.67
LITAF-211ENST00000572255 PLA2G5P39877 138 aa19.24■□□□□ 0.67
LITAF-211ENST00000572255 GNL2Q13823 731 aaKnown RBP19.24■□□□□ 0.67
LITAF-211ENST00000572255 NOSTRINQ8IVI9 506 aa19.24■□□□□ 0.67
LITAF-211ENST00000572255 RPGRIP1Q96KN7 1286 aa19.24■□□□□ 0.67
LITAF-211ENST00000572255 FAM193BQ96PV7 902 aaPredicted RBP19.24■□□□□ 0.67
LITAF-211ENST00000572255 TMEM175Q9BSA9 504 aa19.24■□□□□ 0.67
LITAF-211ENST00000572255 POLR3CQ9BUI4 534 aaPredicted RBP19.24■□□□□ 0.67
LITAF-211ENST00000572255 VN1R3Q9BXE9 311 aa19.24■□□□□ 0.67
LITAF-211ENST00000572255 NFKBIZQ9BYH8 718 aa19.24■□□□□ 0.67
LITAF-211ENST00000572255 CSRNP2Q9H175 543 aa19.24■□□□□ 0.67
LITAF-211ENST00000572255 UBN1Q9NPG3 1134 aa19.24■□□□□ 0.67
LITAF-211ENST00000572255 GPRC5CQ9NQ84 441 aa19.24■□□□□ 0.67
LITAF-211ENST00000572255 DBR1Q9UK59 544 aaKnown RBP19.24■□□□□ 0.67
LITAF-211ENST00000572255 ARIH1Q9Y4X5 557 aaPredicted RBP19.24■□□□□ 0.67
LITAF-211ENST00000572255 IRAK3Q9Y616 596 aa19.24■□□□□ 0.67
LITAF-211ENST00000572255 ARF4P18085 180 aaPredicted RBP19.23■□□□□ 0.67
LITAF-211ENST00000572255 GIT2Q14161 759 aa19.23■□□□□ 0.67
LITAF-211ENST00000572255 TPRNQ4KMQ1 711 aa19.23■□□□□ 0.67
LITAF-211ENST00000572255 TTC38Q5R3I4 469 aa19.23■□□□□ 0.67
LITAF-211ENST00000572255 POTEGQ6S5H5 508 aa19.23■□□□□ 0.67
LITAF-211ENST00000572255 MAEAQ7L5Y9 396 aa19.23■□□□□ 0.67
LITAF-211ENST00000572255 TMEM87AQ8NBN3 555 aa19.23■□□□□ 0.67
LITAF-211ENST00000572255 ERMNQ8TAM6 284 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms