RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 UHMK1Q8TAS1 419 aaKnown RBP11.59□□□□□ -0.55
CCDC40-207ENST00000572253 SYT11Q9BT88 431 aa11.59□□□□□ -0.55
CCDC40-207ENST00000572253 BAIAP2L1Q9UHR4 511 aa11.59□□□□□ -0.55
CCDC40-207ENST00000572253 ZMYM2Q9UBW7 1377 aa11.59□□□□□ -0.55
CCDC40-207ENST00000572253 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.59□□□□□ -0.55
CCDC40-207ENST00000572253 BMP3P12645 472 aa11.59□□□□□ -0.55
CCDC40-207ENST00000572253 MUTP22033 750 aa11.59□□□□□ -0.55
CCDC40-207ENST00000572253 MMP14P50281 582 aa11.59□□□□□ -0.55
CCDC40-207ENST00000572253 PDE6CP51160 858 aa11.59□□□□□ -0.55
CCDC40-207ENST00000572253 RBM5P52756 815 aaKnown RBP eCLIP11.59□□□□□ -0.55
CCDC40-207ENST00000572253 TCP10Q12799 353 aa11.59□□□□□ -0.55
CCDC40-207ENST00000572253 MYBPC2Q14324 1141 aa11.59□□□□□ -0.55
CCDC40-207ENST00000572253 COG2Q14746 738 aa11.59□□□□□ -0.55
CCDC40-207ENST00000572253 KCTD19Q17RG1 926 aaPredicted RBP11.59□□□□□ -0.55
CCDC40-207ENST00000572253 ZDHHC24Q6UX98 284 aa11.59□□□□□ -0.55
CCDC40-207ENST00000572253 HOOK2Q96ED9 719 aa11.59□□□□□ -0.55
CCDC40-207ENST00000572253 NGLY1Q96IV0 654 aa11.59□□□□□ -0.55
CCDC40-207ENST00000572253 ZNF317Q96PQ6 595 aaPredicted RBP11.59□□□□□ -0.55
CCDC40-207ENST00000572253 HSD17B14Q9BPX1 270 aa11.59□□□□□ -0.55
CCDC40-207ENST00000572253 ROPN1BQ9BZX4 212 aaPredicted RBP11.59□□□□□ -0.55
CCDC40-207ENST00000572253 ROPN1Q9HAT0 212 aaPredicted RBP11.59□□□□□ -0.55
CCDC40-207ENST00000572253 FAM170AA1A519 330 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 TULP1O00294 542 aaPredicted RBP11.58□□□□□ -0.56
CCDC40-207ENST00000572253 RTN2O75298 545 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 RARGP13631 454 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 RPL21P46778 160 aaKnown RBP11.58□□□□□ -0.56
CCDC40-207ENST00000572253 MAP2K1Q02750 393 aaPredicted RBP11.58□□□□□ -0.56
CCDC40-207ENST00000572253 NFIAQ12857 509 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 RPUSD2Q8IZ73 545 aaKnown RBP11.58□□□□□ -0.56
CCDC40-207ENST00000572253 CERS5Q8N5B7 392 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 PRELID2Q8N945 189 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 GMCL1Q96IK5 515 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 WDR11Q9BZH6 1224 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 SEMA4AQ9H3S1 761 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 VEZTQ9HBM0 779 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 ELF1P32519 619 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 PTGIRP43119 386 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 SLCO1A2P46721 670 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 IFNAR2P48551 515 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 ABCB5Q2M3G0 1257 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 WLSQ5T9L3 541 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 CYFIP1Q7L576 1253 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 KSR1Q8IVT5 923 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 GMCL1P1Q8NEA9 526 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 PRMT1Q99873 361 aaKnown RBP11.58□□□□□ -0.56
CCDC40-207ENST00000572253 DMAC2Q9NW81 257 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 COG5Q9UP83 839 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.58□□□□□ -0.56
CCDC40-207ENST00000572253 FAM196BA6NMK8 535 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 P4HA2O15460 535 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 SLITRK3O94933 977 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 ECEL1O95672 775 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 NDUFB10O96000 172 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 CRKP46108 304 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 VPS72Q15906 364 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 TRMT10CQ7L0Y3 403 aaKnown RBP11.58□□□□□ -0.56
CCDC40-207ENST00000572253 TRPM8Q7Z2W7 1104 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 TEX2Q8IWB9 1127 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 CYP2W1Q8TAV3 490 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 P2RX7Q99572 595 aaKnown RBP11.58□□□□□ -0.56
CCDC40-207ENST00000572253 BCAS3Q9H6U6 928 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 GRHL1Q9NZI5 618 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 MCM8Q9UJA3 840 aa11.58□□□□□ -0.56
CCDC40-207ENST00000572253 K7ENM7 598 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 CFBP00751 764 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 COMTP21964 271 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 FGFR4P22455 802 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 CTNNA2P26232 953 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 IFI35P80217 286 aaPredicted RBP11.57□□□□□ -0.56
CCDC40-207ENST00000572253 ALCAMQ13740 583 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 E2F5Q15329 346 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 SPRED3Q2MJR0 410 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 APOBEC3HQ6NTF7 200 aaKnown RBP11.57□□□□□ -0.56
CCDC40-207ENST00000572253 PIGWQ7Z7B1 504 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 PNMA8AQ86V59 439 aaPredicted RBP11.57□□□□□ -0.56
CCDC40-207ENST00000572253 SLC9A9Q8IVB4 645 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 ATXN2LQ8WWM7 1075 aaKnown RBP11.57□□□□□ -0.56
CCDC40-207ENST00000572253 PLCD4Q9BRC7 762 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 GPR88Q9GZN0 384 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 EPB41L4BQ9H329 900 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 PPIP5K2O43314 1243 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 RIPK2O43353 540 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 GBP2P32456 591 aaPredicted RBP11.57□□□□□ -0.56
CCDC40-207ENST00000572253 COILP38432 576 aaPredicted RBP11.57□□□□□ -0.56
CCDC40-207ENST00000572253 DOK7Q18PE1 504 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 OTOP1Q7RTM1 612 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 SLC20A1Q8WUM9 679 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 KRT35Q92764 455 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 N4BP2L2Q92802 583 aaPredicted RBP11.57□□□□□ -0.56
CCDC40-207ENST00000572253 IKZF4Q9H2S9 585 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 CCDC134Q9H6E4 229 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 TMEM206Q9H813 350 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 EMSYQ7Z589 1322 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 RPTORQ8N122 1335 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 MGRN1O60291 552 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 SUN1O94901 812 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 ZNF131P52739 623 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 ELF3P78545 371 aaPredicted RBP11.57□□□□□ -0.56
CCDC40-207ENST00000572253 PPP2R5CQ13362 524 aa11.57□□□□□ -0.56
CCDC40-207ENST00000572253 TCEAL1Q15170 157 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms