RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 SLC12A3P55017 1021 aa9.65□□□□□ -0.86
SMG6-210ENST00000572205 GNL2Q13823 731 aaKnown RBP9.65□□□□□ -0.86
SMG6-210ENST00000572205 NAALADL2Q58DX5 795 aa9.65□□□□□ -0.86
SMG6-210ENST00000572205 PADI6Q6TGC4 694 aa9.65□□□□□ -0.86
SMG6-210ENST00000572205 AGMOQ6ZNB7 445 aa9.65□□□□□ -0.86
SMG6-210ENST00000572205 C1orf186Q6ZWK4 172 aa9.65□□□□□ -0.86
SMG6-210ENST00000572205 OTUD6AQ7L8S5 288 aa9.65□□□□□ -0.86
SMG6-210ENST00000572205 TMEM192Q8IY95 271 aa9.65□□□□□ -0.86
SMG6-210ENST00000572205 RNF149Q8NC42 400 aa9.65□□□□□ -0.86
SMG6-210ENST00000572205 SMG8Q8ND04 991 aaKnown RBP9.65□□□□□ -0.86
SMG6-210ENST00000572205 NACC1Q96RE7 527 aa9.65□□□□□ -0.86
SMG6-210ENST00000572205 YME1L1Q96TA2 773 aa9.65□□□□□ -0.86
SMG6-210ENST00000572205 JPH2Q9BR39 696 aaPredicted RBP9.65□□□□□ -0.86
SMG6-210ENST00000572205 GCOM2Q9BZD3 368 aaPredicted RBP9.65□□□□□ -0.86
SMG6-210ENST00000572205 BHMT2Q9H2M3 363 aa9.65□□□□□ -0.86
SMG6-210ENST00000572205 KIAA1024Q9UPX6 916 aa9.65□□□□□ -0.86
SMG6-210ENST00000572205 TCF20Q9UGU0 1960 aaKnown RBP9.64□□□□□ -0.87
SMG6-210ENST00000572205 CNTNAP2Q9UHC6 1331 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 ABLIM1O14639 778 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 GRM6O15303 877 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 MEFVO15553 781 aaPredicted RBP9.64□□□□□ -0.87
SMG6-210ENST00000572205 MARCH6O60337 910 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 ZNF623O75123 536 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 EYA4O95677 639 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 EFEMP2O95967 443 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 ARF4P18085 180 aaPredicted RBP9.64□□□□□ -0.87
SMG6-210ENST00000572205 PDCP20941 246 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 SFPQP23246 707 aaKnown RBP eCLIP9.64□□□□□ -0.87
SMG6-210ENST00000572205 SSTR3P32745 418 aaPredicted RBP9.64□□□□□ -0.87
SMG6-210ENST00000572205 DDIT3P35638 169 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 PAN2Q504Q3 1202 aaKnown RBP9.64□□□□□ -0.87
SMG6-210ENST00000572205 ARSHQ5FYA8 562 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 DTHD1Q6ZMT9 781 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 SRGAP1Q7Z6B7 1085 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 MRPL10Q7Z7H8 261 aaKnown RBP9.64□□□□□ -0.87
SMG6-210ENST00000572205 TMEM173Q86WV6 379 aaPredicted RBP9.64□□□□□ -0.87
SMG6-210ENST00000572205 GSTCDQ8NEC7 633 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 MCPH1Q8NEM0 835 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 BCL7CQ8WUZ0 217 aaPredicted RBP9.64□□□□□ -0.87
SMG6-210ENST00000572205 TCP11Q8WWU5 503 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 KCNN1Q92952 543 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 LPPQ93052 612 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 FIZ1Q96SL8 496 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 ZBED2Q9BTP6 218 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 KIFC3Q9BVG8 833 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 EIF2AQ9BY44 585 aaKnown RBP9.64□□□□□ -0.87
SMG6-210ENST00000572205 CXCL16Q9H2A7 254 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 FZD8Q9H461 694 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 POLD4Q9HCU8 107 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 CHST12Q9NRB3 414 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 FAM105AQ9NUU6 356 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 ARHGAP28Q9P2N2 729 aa9.64□□□□□ -0.87
SMG6-210ENST00000572205 PIN4Q9Y237 131 aaKnown RBP9.64□□□□□ -0.87
SMG6-210ENST00000572205 DENND3A2RUS2 1198 aa9.63□□□□□ -0.87
SMG6-210ENST00000572205 ITGB1P05556 798 aa9.63□□□□□ -0.87
SMG6-210ENST00000572205 SRGAP2CP0DJJ0 459 aa9.63□□□□□ -0.87
SMG6-210ENST00000572205 BMPR1AP36894 532 aa9.63□□□□□ -0.87
SMG6-210ENST00000572205 DNM2P50570 870 aa9.63□□□□□ -0.87
SMG6-210ENST00000572205 CDC42EP1Q00587 391 aa9.63□□□□□ -0.87
SMG6-210ENST00000572205 MXD4Q14582 209 aaPredicted RBP9.63□□□□□ -0.87
SMG6-210ENST00000572205 FAM187BQ17R55 369 aa9.63□□□□□ -0.87
SMG6-210ENST00000572205 RINT1Q6NUQ1 792 aa9.63□□□□□ -0.87
SMG6-210ENST00000572205 EXOC8Q8IYI6 725 aa9.63□□□□□ -0.87
SMG6-210ENST00000572205 ERMNQ8TAM6 284 aa9.63□□□□□ -0.87
SMG6-210ENST00000572205 CHAMP1Q96JM3 812 aa9.63□□□□□ -0.87
SMG6-210ENST00000572205 AK8Q96MA6 479 aa9.63□□□□□ -0.87
SMG6-210ENST00000572205 SAMD11Q96NU1 681 aa9.63□□□□□ -0.87
SMG6-210ENST00000572205 VN1R3Q9BXE9 311 aa9.63□□□□□ -0.87
SMG6-210ENST00000572205 USP20Q9Y2K6 914 aa9.63□□□□□ -0.87
SMG6-210ENST00000572205 ZMYM2Q9UBW7 1377 aa9.63□□□□□ -0.87
SMG6-210ENST00000572205 ARHGEF35A5YM69 484 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 ASAP2O43150 1006 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 PLCG1P19174 1290 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 GUCY2CP25092 1073 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 CTNNB1P35222 781 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 IRS1P35568 1242 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 LONP1P36776 959 aaKnown RBP9.62□□□□□ -0.87
SMG6-210ENST00000572205 PBX3P40426 434 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 NAMPTP43490 491 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 ZNF131P52739 623 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 BTG3Q14201 252 aaPredicted RBP9.62□□□□□ -0.87
SMG6-210ENST00000572205 SLC39A14Q15043 492 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 KARSQ15046 597 aaKnown RBP9.62□□□□□ -0.87
SMG6-210ENST00000572205 NAB2Q15742 525 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 ODR4Q5SWX8 454 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 EEF1DP3Q658K8 133 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 MAEAQ7L5Y9 396 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 CATSPER4Q7RTX7 472 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 CDR2LQ86X02 465 aaPredicted RBP9.62□□□□□ -0.87
SMG6-210ENST00000572205 HSCBQ8IWL3 235 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 FIBCD1Q8N539 461 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 SYT2Q8N9I0 419 aaPredicted RBP9.62□□□□□ -0.87
SMG6-210ENST00000572205 COLGALT1Q8NBJ5 622 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 LINC00301Q8NCQ3 95 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 HELQQ8TDG4 1101 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 P2RX5Q93086 422 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 MRPL38Q96DV4 380 aaKnown RBP9.62□□□□□ -0.87
SMG6-210ENST00000572205 CPB2Q96IY4 423 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 EPSTI1Q96J88 318 aa9.62□□□□□ -0.87
SMG6-210ENST00000572205 CLIC6Q96NY7 704 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms