RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-213	ENST00000571643	CLEC14A	Q86T13	490 aa		4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	LRRTM3	Q86VH5	581 aa		4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	NIM1K	Q8IY84	436 aa		4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	ANKRD53	Q8N9V6	530 aa		4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	TCF25	Q9BQ70	676 aa		4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	SCAND2P	Q9GZW5	306 aa	Predicted RBP	4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	PCED1A	Q9H1Q7	454 aa		4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	MTG2	Q9H4K7	406 aa		4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	PIF1	Q9H611	641 aa		4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	KANSL2	Q9H9L4	492 aa		4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	FANCL	Q9NW38	375 aa		4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	RCAN3	Q9UKA8	241 aa		4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	KIAA1107	Q9UPP5	1409 aa		4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	EHBP1L1	Q8N3D4	1523 aa		4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	TTC37	Q6PGP7	1564 aa		4.87	□□□□□ -1.63
CDC27-213	ENST00000571643	IPO13	O94829	963 aa	Known RBP	4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	PEX11B	O96011	259 aa		4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	ATP2A2	P16615	1042 aa	Known RBP	4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	SMAD3	P84022	425 aa	Known RBP	4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	PURA	Q00577	322 aa	Known RBP	4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	LSM12	Q3MHD2	195 aa	Known RBP	4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	CCDC178	Q5BJE1	867 aa		4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	ESPNL	Q6ZVH7	1005 aa		4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	TMPRSS6	Q8IU80	811 aa		4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	FAM177A1	Q8N128	213 aa	Predicted RBP	4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	AMER2	Q8N7J2	671 aa		4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	OR2W6P	Q8NHA6	318 aa		4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	IL17D	Q8TAD2	202 aa		4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	CACTIN	Q8WUQ7	758 aa	Known RBP	4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	EXTL1	Q92935	676 aa		4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	FERMT2	Q96AC1	680 aa		4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	MFSD3	Q96ES6	412 aa		4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	TMEM176A	Q96HP8	235 aa		4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	PLEKHG4B	Q96PX9	1271 aa		4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	4.86	□□□□□ -1.63	7e-9	■■■■□ 23.2
CDC27-213	ENST00000571643	IL23A	Q9NPF7	189 aa		4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	DNAI1	Q9UI46	699 aa		4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	HS3ST3A1	Q9Y663	406 aa		4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	ZNF518A	Q6AHZ1	1483 aa		4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	ZMYM4	Q5VZL5	1548 aa		4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	TIAM1	Q13009	1591 aa		4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	PREX2	Q70Z35	1606 aa		4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	ITSN2	Q9NZM3	1697 aa		4.86	□□□□□ -1.63
CDC27-213	ENST00000571643	C2orf78	A6NCI8	922 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	NPIPB8	E9PQR5	432 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	NRP2	O60462	931 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	OPHN1	O60890	802 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	TOX4	O94842	621 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	APOL3	O95236	402 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	GPR15	P49685	360 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	SCNN1B	P51168	640 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	ANTXR2	P58335	489 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	PHC1	P78364	1004 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	TUBA3C	Q13748	450 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	CNGB1	Q14028	1251 aa	Predicted RBP	4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	SAFB2	Q14151	953 aa	Known RBP eCLIP	4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	TUBA3E	Q6PEY2	450 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	FAM111B	Q6SJ93	734 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	GAREM2	Q75VX8	874 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	C11orf74	Q86VG3	221 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	UNC5B	Q8IZJ1	945 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	CDYL2	Q8N8U2	506 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	ARL8A	Q96BM9	186 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	RPL10L	Q96L21	214 aa	Known RBP	4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	UIMC1	Q96RL1	719 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	GPHA2	Q96T91	129 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	NOL10	Q9BSC4	688 aa	Known RBP	4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	MYL10	Q9BUA6	226 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	MRI	Q9BWK5	157 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	WNT8A	Q9H1J5	351 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	POFUT1	Q9H488	388 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	AGO3	Q9H9G7	860 aa	Known RBP	4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	SH3BP1	Q9Y3L3	701 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	CCNB3	Q8WWL7	1395 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	CDC42BPA	Q5VT25	1732 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	RICTOR	Q6R327	1708 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	SUPT6H	Q7KZ85	1726 aa	Known RBP	4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	CDC42BPB	Q9Y5S2	1711 aa		4.85	□□□□□ -1.63
CDC27-213	ENST00000571643	ARHGAP5	Q13017	1502 aa		4.84	□□□□□ -1.63
CDC27-213	ENST00000571643	GPATCH8	Q9UKJ3	1502 aa	Known RBP	4.84	□□□□□ -1.63
CDC27-213	ENST00000571643	ADGRL1	O94910	1474 aa		4.84	□□□□□ -1.63
CDC27-213	ENST00000571643	LRRC9	Q6ZRR7	1453 aa		4.84	□□□□□ -1.63
CDC27-213	ENST00000571643	MLH3	Q9UHC1	1453 aa		4.84	□□□□□ -1.63
CDC27-213	ENST00000571643	POGZ	Q7Z3K3	1410 aa		4.84	□□□□□ -1.63
CDC27-213	ENST00000571643	MIA2	Q96PC5	1412 aa		4.84	□□□□□ -1.63
CDC27-213	ENST00000571643	SCAPER	Q9BY12	1400 aa		4.84	□□□□□ -1.63
CDC27-213	ENST00000571643	XPA	P23025	273 aa	Predicted RBP	4.84	□□□□□ -1.63
CDC27-213	ENST00000571643	LSP1	P33241	339 aa		4.84	□□□□□ -1.63
CDC27-213	ENST00000571643	KIR2DL3	P43628	341 aa		4.84	□□□□□ -1.63
CDC27-213	ENST00000571643	MAN2A2	P49641	1150 aa		4.84	□□□□□ -1.63
CDC27-213	ENST00000571643	NPEPPS	P55786	919 aa		4.84	□□□□□ -1.63
CDC27-213	ENST00000571643	ADAM8	P78325	824 aa		4.84	□□□□□ -1.63
CDC27-213	ENST00000571643	ELAVL1	Q15717	326 aa	Known RBP	4.84	□□□□□ -1.63
CDC27-213	ENST00000571643	CNNM4	Q6P4Q7	775 aa		4.84	□□□□□ -1.63
CDC27-213	ENST00000571643	ZFPM1	Q8IX07	1006 aa		4.84	□□□□□ -1.63
CDC27-213	ENST00000571643	GSPT2	Q8IYD1	628 aa	Known RBP	4.84	□□□□□ -1.63
CDC27-213	ENST00000571643	RTF1	Q92541	710 aa	Known RBP	4.84	□□□□□ -1.63
CDC27-213	ENST00000571643	ZMAT4	Q9H898	229 aa		4.84	□□□□□ -1.63
CDC27-213	ENST00000571643	THG1L	Q9NWX6	298 aa	Known RBP	4.84	□□□□□ -1.63
CDC27-213	ENST00000571643	CFDP1	Q9UEE9	299 aa	Predicted RBP	4.84	□□□□□ -1.63

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