RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 ZBTB41Q5SVQ8 909 aa5.61□□□□□ -1.51
NUP88-202ENST00000570937 STRA8Q7Z7C7 330 aa5.61□□□□□ -1.51
NUP88-202ENST00000570937 CLEC14AQ86T13 490 aa5.61□□□□□ -1.51
NUP88-202ENST00000570937 AFAP1L2Q8N4X5 818 aa5.61□□□□□ -1.51
NUP88-202ENST00000570937 SOX7Q9BT81 388 aa5.61□□□□□ -1.51
NUP88-202ENST00000570937 PLA2G12BQ9BX93 195 aa5.61□□□□□ -1.51
NUP88-202ENST00000570937 KLC2Q9H0B6 622 aa5.61□□□□□ -1.51
NUP88-202ENST00000570937 WNT8AQ9H1J5 351 aa5.61□□□□□ -1.51
NUP88-202ENST00000570937 C12orf65Q9H3J6 166 aaKnown RBP5.61□□□□□ -1.51
NUP88-202ENST00000570937 MLH3Q9UHC1 1453 aa5.61□□□□□ -1.51
NUP88-202ENST00000570937 APOBEC2Q9Y235 224 aaKnown RBP5.61□□□□□ -1.51
NUP88-202ENST00000570937 CDC42BPBQ9Y5S2 1711 aa5.61□□□□□ -1.51
NUP88-202ENST00000570937 RICTORQ6R327 1708 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 ITSN2Q9NZM3 1697 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 C9orf84Q5VXU9 1444 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 MIA2Q96PC5 1412 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 TRAPPC8Q9Y2L5 1435 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 ZNF644Q9H582 1327 aaPredicted RBP5.6□□□□□ -1.51
NUP88-202ENST00000570937 BRINP1O60477 761 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 ULK1O75385 1050 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 SELENOPP49908 381 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 ADAM8P78325 824 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 R3HDM1Q15032 1099 aaKnown RBP5.6□□□□□ -1.51
NUP88-202ENST00000570937 CDSNQ15517 529 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 MAN2A1Q16706 1144 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 GAGE13Q4V321 117 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 POLNQ7Z5Q5 900 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 CXorf67Q86X51 503 aaPredicted RBP5.6□□□□□ -1.51
NUP88-202ENST00000570937 GPR135Q8IZ08 494 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 UBR7Q8N806 425 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 BORCS6Q96GS4 357 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 HIST1H2AHQ96KK5 128 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 CDK5RAP1Q96SZ6 601 aaKnown RBP5.6□□□□□ -1.51
NUP88-202ENST00000570937 HIST1H2AJQ99878 128 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 NOL10Q9BSC4 688 aaKnown RBP5.6□□□□□ -1.51
NUP88-202ENST00000570937 MS4A5Q9H3V2 200 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 DEF6Q9H4E7 631 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 TSC22D4Q9Y3Q8 395 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 TCAF1Q9Y4C2 921 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 TESMINQ9Y4I5 508 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 NUMBLQ9Y6R0 609 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 CDC42BPAQ5VT25 1732 aa5.6□□□□□ -1.51
NUP88-202ENST00000570937 KDM5CP41229 1560 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 FRMPD1Q5SYB0 1578 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 ABCC1P33527 1531 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 ARHGEF40Q8TER5 1519 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 MYOM3Q5VTT5 1437 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 YEATS2Q9ULM3 1422 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 ST20-MTHFSA0A0A6YYL1 179 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.59□□□□□ -1.51
NUP88-202ENST00000570937 PRSS38A1L453 326 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 LCHNA4D1U4 455 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 EYA4O95677 639 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 COMTP21964 271 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 ID4P47928 161 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 GPR15P49685 360 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 MANFP55145 182 aaKnown RBP5.59□□□□□ -1.51
NUP88-202ENST00000570937 SESN3P58005 492 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 ATP2C1P98194 919 aaPredicted RBP5.59□□□□□ -1.51
NUP88-202ENST00000570937 STRN3Q13033 797 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 HS1BP3Q53T59 392 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 CCDC178Q5BJE1 867 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 DBX2Q6ZNG2 339 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 CDYL2Q8N8U2 506 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 PLA2G15Q8NCC3 412 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 SHCBP1Q8NEM2 672 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 RSAD2Q8WXG1 361 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 EDAQ92838 391 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 GCDHQ92947 438 aaPredicted RBP5.59□□□□□ -1.51
NUP88-202ENST00000570937 FERMT2Q96AC1 680 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 DNAI1Q9UI46 699 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 TMPRSS11EQ9UL52 423 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 MYRFQ9Y2G1 1151 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 PCDHB6Q9Y5E3 794 aa5.59□□□□□ -1.51
NUP88-202ENST00000570937 SYCP2Q9BX26 1530 aa5.58□□□□□ -1.52
NUP88-202ENST00000570937 ARHGEF12Q9NZN5 1544 aa5.58□□□□□ -1.52
NUP88-202ENST00000570937 RTEL1-TNFRSF6BF6WH68 1400 aa5.58□□□□□ -1.52
NUP88-202ENST00000570937 DAPK3O43293 454 aa5.58□□□□□ -1.52
NUP88-202ENST00000570937 KDM1AO60341 852 aa5.58□□□□□ -1.52
NUP88-202ENST00000570937 RAB11FIP3O75154 756 aa5.58□□□□□ -1.52
NUP88-202ENST00000570937 SEC24DO94855 1032 aaPredicted RBP5.58□□□□□ -1.52
NUP88-202ENST00000570937 FSBPO95073 299 aa5.58□□□□□ -1.52
NUP88-202ENST00000570937 PCDH8O95206 1070 aa5.58□□□□□ -1.52
NUP88-202ENST00000570937 TCIRG1Q13488 830 aa5.58□□□□□ -1.52
NUP88-202ENST00000570937 RIN1Q13671 783 aa5.58□□□□□ -1.52
NUP88-202ENST00000570937 SAFB2Q14151 953 aaKnown RBP eCLIP5.58□□□□□ -1.52
NUP88-202ENST00000570937 Q6ZSN1 163 aa5.58□□□□□ -1.52
NUP88-202ENST00000570937 SLC41A1Q8IVJ1 513 aa5.58□□□□□ -1.52
NUP88-202ENST00000570937 OR14A2Q96R54 314 aa5.58□□□□□ -1.52
NUP88-202ENST00000570937 GPR20Q99678 358 aa5.58□□□□□ -1.52
NUP88-202ENST00000570937 AGO3Q9H9G7 860 aaKnown RBP5.58□□□□□ -1.52
NUP88-202ENST00000570937 PLA2G3Q9NZ20 509 aa5.58□□□□□ -1.52
NUP88-202ENST00000570937 KCNG1Q9UIX4 513 aa5.58□□□□□ -1.52
NUP88-202ENST00000570937 NOC2LQ9Y3T9 749 aaKnown RBP5.58□□□□□ -1.52
NUP88-202ENST00000570937 PPP2R3BQ9Y5P8 575 aa5.58□□□□□ -1.52
NUP88-202ENST00000570937 RBM8AQ9Y5S9 174 aaKnown RBP5.58□□□□□ -1.52
NUP88-202ENST00000570937 SAMD9LQ8IVG5 1584 aa5.58□□□□□ -1.52
NUP88-202ENST00000570937 HECW2Q9P2P5 1572 aa5.58□□□□□ -1.52
NUP88-202ENST00000570937 MTSS1O43312 755 aa5.57□□□□□ -1.52
NUP88-202ENST00000570937 VSIG10L2P0DP72 767 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms