RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 SMAD4Q13485 552 aaKnown RBP13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 PDE12Q6L8Q7 609 aaKnown RBP13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 KCNT2Q6UVM3 1135 aa13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 GLB1LQ6UWU2 654 aa13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 LRRC55Q6ZSA7 311 aa13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 SRGAP1Q7Z6B7 1085 aa13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 RBM23Q86U06 439 aaKnown RBP13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 GJD3Q8N144 294 aa13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 EFHBQ8N7U6 833 aa13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 RNF149Q8NC42 400 aa13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 MRPS27Q92552 414 aaKnown RBP13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 MTMR9Q96QG7 549 aa13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 HSD17B14Q9BPX1 270 aa13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 TLE6Q9H808 572 aa13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 AGPAT5Q9NUQ2 364 aa13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 FAM105AQ9NUU6 356 aa13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 CD207Q9UJ71 328 aa13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 LZTS1Q9Y250 596 aa13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 PCDHGC5Q9Y5F6 944 aa13.78□□□□□ -0.2
CTDNEP1-205ENST00000570828 ZBTB39O15060 712 aa13.77□□□□□ -0.21
CTDNEP1-205ENST00000570828 ASAP2O43150 1006 aa13.77□□□□□ -0.21
CTDNEP1-205ENST00000570828 ERLIN2O94905 339 aa13.77□□□□□ -0.21
CTDNEP1-205ENST00000570828 RBM25P49756 843 aaKnown RBP13.77□□□□□ -0.21
CTDNEP1-205ENST00000570828 PTPN5P54829 565 aa13.77□□□□□ -0.21
CTDNEP1-205ENST00000570828 PLCB3Q01970 1234 aa13.77□□□□□ -0.21
CTDNEP1-205ENST00000570828 KRT17Q04695 432 aa13.77□□□□□ -0.21
CTDNEP1-205ENST00000570828 ORC2Q13416 577 aaPredicted RBP13.77□□□□□ -0.21
CTDNEP1-205ENST00000570828 ADAM15Q13444 863 aa13.77□□□□□ -0.21
CTDNEP1-205ENST00000570828 MXD4Q14582 209 aaPredicted RBP13.77□□□□□ -0.21
CTDNEP1-205ENST00000570828 FERMT3Q86UX7 667 aa13.77□□□□□ -0.21
CTDNEP1-205ENST00000570828 KIF2CQ99661 725 aa13.77□□□□□ -0.21
CTDNEP1-205ENST00000570828 TCF25Q9BQ70 676 aa13.77□□□□□ -0.21
CTDNEP1-205ENST00000570828 TMEM60Q9H2L4 133 aa13.77□□□□□ -0.21
CTDNEP1-205ENST00000570828 FOXP1Q9H334 677 aaPredicted RBP13.77□□□□□ -0.21
CTDNEP1-205ENST00000570828 ENTPD7Q9NQZ7 604 aa13.77□□□□□ -0.21
CTDNEP1-205ENST00000570828 ANKEF1Q9NU02 776 aa13.77□□□□□ -0.21
CTDNEP1-205ENST00000570828 SPG21Q9NZD8 308 aa13.77□□□□□ -0.21
CTDNEP1-205ENST00000570828 PRKAG3Q9UGI9 489 aa13.77□□□□□ -0.21
CTDNEP1-205ENST00000570828 ZC3H11AO75152 810 aaKnown RBP eCLIP13.76□□□□□ -0.21
CTDNEP1-205ENST00000570828 DGAT1O75907 488 aa13.76□□□□□ -0.21
CTDNEP1-205ENST00000570828 OR52Z1P0C646 297 aa13.76□□□□□ -0.21
CTDNEP1-205ENST00000570828 ALDH7A1P49419 539 aaKnown RBP13.76□□□□□ -0.21
CTDNEP1-205ENST00000570828 TFDP1Q14186 410 aa13.76□□□□□ -0.21
CTDNEP1-205ENST00000570828 LONRF3Q496Y0 759 aa13.76□□□□□ -0.21
CTDNEP1-205ENST00000570828 PLPP4Q5VZY2 271 aa13.76□□□□□ -0.21
CTDNEP1-205ENST00000570828 FBXO18Q8NFZ0 1043 aa13.76□□□□□ -0.21
CTDNEP1-205ENST00000570828 LPPQ93052 612 aa13.76□□□□□ -0.21
CTDNEP1-205ENST00000570828 PGBD4Q96DM1 585 aa13.76□□□□□ -0.21
CTDNEP1-205ENST00000570828 CDCA3Q99618 268 aaPredicted RBP13.76□□□□□ -0.21
CTDNEP1-205ENST00000570828 MINDY3Q9H8M7 445 aa13.76□□□□□ -0.21
CTDNEP1-205ENST00000570828 NGRNQ9NPE2 291 aaKnown RBP13.76□□□□□ -0.21
CTDNEP1-205ENST00000570828 CD320Q9NPF0 282 aa13.76□□□□□ -0.21
CTDNEP1-205ENST00000570828 XPNPEP1Q9NQW7 623 aa13.76□□□□□ -0.21
CTDNEP1-205ENST00000570828 VPS9D1Q9Y2B5 631 aa13.76□□□□□ -0.21
CTDNEP1-205ENST00000570828 INPP5FQ9Y2H2 1132 aa13.76□□□□□ -0.21
CTDNEP1-205ENST00000570828 KIAA1671Q9BY89 1806 aa13.76□□□□□ -0.21
CTDNEP1-205ENST00000570828 WDR81Q562E7 1941 aa13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 CARNS1A5YM72 827 aa13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 FSCN2O14926 492 aa13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 PER2O15055 1255 aa13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 MBTPS2O43462 519 aa13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 ZNF623O75123 536 aa13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 SRGAP2BP0DMP2 458 aa13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 RARRES1P49788 294 aa13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 ERVFC1P60507 584 aa13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 RNASELQ05823 741 aaKnown RBP13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 ZP2Q05996 745 aa13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 RABEP1Q15276 862 aa13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 PCBP1Q15365 356 aaKnown RBP eCLIP13.75□□□□□ -0.214e-12■■■■■ 62.4
CTDNEP1-205ENST00000570828 SMAD2Q15796 467 aaKnown RBP13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 DUSP6Q16828 381 aa13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 NOMO2Q5JPE7 1267 aa13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 TTC38Q5R3I4 469 aa13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 NOSTRINQ8IVI9 506 aa13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 ADHFE1Q8IWW8 467 aa13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 SLC39A11Q8N1S5 342 aa13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 ERMNQ8TAM6 284 aa13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 URGCPQ8TCY9 931 aa13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 PIGOQ8TEQ8 1089 aa13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 TMEM169Q96HH4 297 aa13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 POP1Q99575 1024 aaKnown RBP13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 UPF2Q9HAU5 1272 aaKnown RBP13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 BARX2Q9UMQ3 279 aaPredicted RBP13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 NOL7Q9UMY1 257 aaKnown RBP13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 PCDHB2Q9Y5E7 798 aa13.75□□□□□ -0.21
CTDNEP1-205ENST00000570828 FNDC1Q4ZHG4 1894 aaPredicted RBP13.74□□□□□ -0.21
CTDNEP1-205ENST00000570828 INO80B-WBP1J3KQ70 363 aa13.74□□□□□ -0.21
CTDNEP1-205ENST00000570828 USO1O60763 962 aaKnown RBP13.74□□□□□ -0.21
CTDNEP1-205ENST00000570828 GLP2RO95838 553 aa13.74□□□□□ -0.21
CTDNEP1-205ENST00000570828 TRAPPC10P48553 1259 aa13.74□□□□□ -0.21
CTDNEP1-205ENST00000570828 BCAR1P56945 870 aa13.74□□□□□ -0.21
CTDNEP1-205ENST00000570828 PTENP60484 403 aa13.74□□□□□ -0.21
CTDNEP1-205ENST00000570828 NCBP1Q09161 790 aaKnown RBP13.74□□□□□ -0.21
CTDNEP1-205ENST00000570828 COASYQ13057 564 aa13.74□□□□□ -0.21
CTDNEP1-205ENST00000570828 BMS1Q14692 1282 aaKnown RBP13.74□□□□□ -0.21
CTDNEP1-205ENST00000570828 ZNF174Q15697 407 aa13.74□□□□□ -0.21
CTDNEP1-205ENST00000570828 TMC7Q7Z402 723 aa13.74□□□□□ -0.21
CTDNEP1-205ENST00000570828 SMRP1Q8NCR6 262 aa13.74□□□□□ -0.21
CTDNEP1-205ENST00000570828 MSLNLQ96KJ4 702 aa13.74□□□□□ -0.21
CTDNEP1-205ENST00000570828 EPHX3Q9H6B9 360 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms