RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 PRKCQQ04759 706 aa11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 DRP2Q13474 957 aa11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 MLF2Q15773 248 aaPredicted RBP11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 SLC44A4Q53GD3 710 aa11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 WWC2Q6AWC2 1192 aa11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 ZNF746Q6NUN9 644 aaPredicted RBP11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 ELMSAN1Q6PJG2 1045 aa11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 AGMOQ6ZNB7 445 aa11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 NETO1Q8TDF5 533 aa11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 HDAC7Q8WUI4 952 aa11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 TMEM175Q9BSA9 504 aa11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 HERC2P3Q9BVR0 1158 aa11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 RXFP1Q9HBX9 757 aa11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 LTB4R2Q9NPC1 389 aa11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 RIC8AQ9NPQ8 531 aa11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 MARCH5Q9NX47 278 aa11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 GMEB2Q9UKD1 530 aa11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 PCDHA10Q9Y5I2 948 aa11.8□□□□□ -0.52
CTDNEP1-202ENST00000570380 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.79□□□□□ -0.52
CTDNEP1-202ENST00000570380 GAS2O43903 313 aaKnown RBP11.79□□□□□ -0.52
CTDNEP1-202ENST00000570380 ZNF862O60290 1169 aa11.79□□□□□ -0.52
CTDNEP1-202ENST00000570380 EFEMP2O95967 443 aa11.79□□□□□ -0.52
CTDNEP1-202ENST00000570380 PSAPP07602 524 aa11.79□□□□□ -0.52
CTDNEP1-202ENST00000570380 MAGEA9P43362 315 aa11.79□□□□□ -0.52
CTDNEP1-202ENST00000570380 B4GALNT3Q6L9W6 998 aa11.79□□□□□ -0.52
CTDNEP1-202ENST00000570380 PALB2Q86YC2 1186 aa11.79□□□□□ -0.52
CTDNEP1-202ENST00000570380 RAB11FIP4Q86YS3 637 aa11.79□□□□□ -0.52
CTDNEP1-202ENST00000570380 SMAP1Q8IYB5 467 aaPredicted RBP11.79□□□□□ -0.52
CTDNEP1-202ENST00000570380 RNF168Q8IYW5 571 aaPredicted RBP11.79□□□□□ -0.52
CTDNEP1-202ENST00000570380 PHKBQ93100 1093 aa11.79□□□□□ -0.52
CTDNEP1-202ENST00000570380 CLDN23Q96B33 292 aa11.79□□□□□ -0.52
CTDNEP1-202ENST00000570380 FAM167AQ96KS9 214 aa11.79□□□□□ -0.52
CTDNEP1-202ENST00000570380 FAM193BQ96PV7 902 aaPredicted RBP11.79□□□□□ -0.52
CTDNEP1-202ENST00000570380 GCOM2Q9BZD3 368 aaPredicted RBP11.79□□□□□ -0.52
CTDNEP1-202ENST00000570380 PRKD2Q9BZL6 878 aa11.79□□□□□ -0.52
CTDNEP1-202ENST00000570380 PLEKHA4Q9H4M7 779 aa11.79□□□□□ -0.52
CTDNEP1-202ENST00000570380 ZDHHC7Q9NXF8 308 aa11.79□□□□□ -0.52
CTDNEP1-202ENST00000570380 PIN4Q9Y237 131 aaKnown RBP11.79□□□□□ -0.52
CTDNEP1-202ENST00000570380 SSX2IPQ9Y2D8 614 aa11.79□□□□□ -0.52
CTDNEP1-202ENST00000570380 ZFP37Q9Y6Q3 630 aaPredicted RBP11.79□□□□□ -0.52
CTDNEP1-202ENST00000570380 A0A087WZ62 844 aa11.78□□□□□ -0.52
CTDNEP1-202ENST00000570380 TGM5O43548 720 aa11.78□□□□□ -0.52
CTDNEP1-202ENST00000570380 OATP04181 439 aa11.78□□□□□ -0.52
CTDNEP1-202ENST00000570380 FSHRP23945 695 aa11.78□□□□□ -0.52
CTDNEP1-202ENST00000570380 GLUD2P49448 558 aa11.78□□□□□ -0.52
CTDNEP1-202ENST00000570380 CLK2P49760 499 aaKnown RBP11.78□□□□□ -0.52
CTDNEP1-202ENST00000570380 RAB27AP51159 221 aa11.78□□□□□ -0.52
CTDNEP1-202ENST00000570380 FZD5Q13467 585 aa11.78□□□□□ -0.52
CTDNEP1-202ENST00000570380 LPAL2Q16609 132 aa11.78□□□□□ -0.52
CTDNEP1-202ENST00000570380 ZBTB41Q5SVQ8 909 aa11.78□□□□□ -0.52
CTDNEP1-202ENST00000570380 RSPO2Q6UXX9 243 aaPredicted RBP11.78□□□□□ -0.52
CTDNEP1-202ENST00000570380 TMTC3Q6ZXV5 915 aa11.78□□□□□ -0.52
CTDNEP1-202ENST00000570380 URGCPQ8TCY9 931 aa11.78□□□□□ -0.52
CTDNEP1-202ENST00000570380 CRYGNQ8WXF5 182 aa11.78□□□□□ -0.52
CTDNEP1-202ENST00000570380 FDXACB1Q9BRP7 624 aaPredicted RBP11.78□□□□□ -0.52
CTDNEP1-202ENST00000570380 ZNF577Q9BSK1 485 aa11.78□□□□□ -0.52
CTDNEP1-202ENST00000570380 PRMT8Q9NR22 394 aaPredicted RBP11.78□□□□□ -0.52
CTDNEP1-202ENST00000570380 SH2B1Q9NRF2 756 aaPredicted RBP11.78□□□□□ -0.52
CTDNEP1-202ENST00000570380 NRBP2Q9NSY0 501 aa11.78□□□□□ -0.52
CTDNEP1-202ENST00000570380 TBC1D22BQ9NU19 505 aa11.78□□□□□ -0.52
CTDNEP1-202ENST00000570380 ANGPTL2Q9UKU9 493 aa11.78□□□□□ -0.52
CTDNEP1-202ENST00000570380 PCDHB2Q9Y5E7 798 aa11.78□□□□□ -0.52
CTDNEP1-202ENST00000570380 GREB1Q4ZG55 1949 aa11.78□□□□□ -0.52
CTDNEP1-202ENST00000570380 FASNP49327 2511 aaKnown RBP11.78□□□□□ -0.52
CTDNEP1-202ENST00000570380 C1RP00736 705 aa11.77□□□□□ -0.53
CTDNEP1-202ENST00000570380 POMCP01189 267 aa11.77□□□□□ -0.53
CTDNEP1-202ENST00000570380 SFPQP23246 707 aaKnown RBP eCLIP11.77□□□□□ -0.53
CTDNEP1-202ENST00000570380 TARSP26639 723 aaKnown RBP11.77□□□□□ -0.53
CTDNEP1-202ENST00000570380 RPS9P46781 194 aaKnown RBP11.77□□□□□ -0.53
CTDNEP1-202ENST00000570380 ADCY7P51828 1080 aa11.77□□□□□ -0.53
CTDNEP1-202ENST00000570380 NAPAP54920 295 aa11.77□□□□□ -0.53
CTDNEP1-202ENST00000570380 DSG1Q02413 1049 aa11.77□□□□□ -0.53
CTDNEP1-202ENST00000570380 DMWDQ09019 674 aa11.77□□□□□ -0.53
CTDNEP1-202ENST00000570380 AP3B2Q13367 1082 aa11.77□□□□□ -0.53
CTDNEP1-202ENST00000570380 TARBP2Q15633 366 aaKnown RBP11.77□□□□□ -0.53
CTDNEP1-202ENST00000570380 LILRA6Q6PI73 481 aa11.77□□□□□ -0.53
CTDNEP1-202ENST00000570380 NFXL1Q6ZNB6 911 aa11.77□□□□□ -0.53
CTDNEP1-202ENST00000570380 CHD1LQ86WJ1 897 aa11.77□□□□□ -0.53
CTDNEP1-202ENST00000570380 PGBD4Q96DM1 585 aa11.77□□□□□ -0.53
CTDNEP1-202ENST00000570380 FAM126AQ9BYI3 521 aaPredicted RBP11.77□□□□□ -0.53
CTDNEP1-202ENST00000570380 KANSL3Q9P2N6 904 aa11.77□□□□□ -0.53
CTDNEP1-202ENST00000570380 CDH7Q9ULB5 785 aa11.77□□□□□ -0.53
CTDNEP1-202ENST00000570380 PRG3Q9Y2Y8 225 aaPredicted RBP11.77□□□□□ -0.53
CTDNEP1-202ENST00000570380 SAMM50Q9Y512 469 aa11.77□□□□□ -0.53
CTDNEP1-202ENST00000570380 SPEGQ15772 3267 aa11.77□□□□□ -0.53
CTDNEP1-202ENST00000570380 SMCO2A6NFE2 343 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 CCDC69A6NI79 296 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 F8W810 466 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 SH2B2O14492 632 aaPredicted RBP11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 PRC1O43663 620 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 GDF9O60383 454 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 CYP3A4P08684 503 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 CALM1P0DP23 149 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 CALM2P0DP24 149 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 CALM3P0DP25 149 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 TDGF1P13385 188 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 PMLP29590 882 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 NTHL1P78549 312 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 CDC42EP1Q00587 391 aa11.76□□□□□ -0.53
CTDNEP1-202ENST00000570380 PFKPQ01813 784 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms