RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 TMEM119Q4V9L6 283 aa14.42□□□□□ -0.1
CNOT1-220ENST00000569916 KCNT2Q6UVM3 1135 aa14.42□□□□□ -0.1
CNOT1-220ENST00000569916 GLB1LQ6UWU2 654 aa14.42□□□□□ -0.1
CNOT1-220ENST00000569916 HSCBQ8IWL3 235 aa14.42□□□□□ -0.1
CNOT1-220ENST00000569916 ZBTB8OSQ8IWT0 167 aa14.42□□□□□ -0.1
CNOT1-220ENST00000569916 THNSL1Q8IYQ7 743 aa14.42□□□□□ -0.1
CNOT1-220ENST00000569916 KIFAP3Q92845 792 aa14.42□□□□□ -0.1
CNOT1-220ENST00000569916 AK8Q96MA6 479 aa14.42□□□□□ -0.1
CNOT1-220ENST00000569916 ZNF558Q96NG5 402 aa14.42□□□□□ -0.1
CNOT1-220ENST00000569916 RUSC1Q9BVN2 902 aa14.42□□□□□ -0.1
CNOT1-220ENST00000569916 NT5C3AQ9H0P0 336 aa14.42□□□□□ -0.1
CNOT1-220ENST00000569916 CSRNP2Q9H175 543 aa14.42□□□□□ -0.1
CNOT1-220ENST00000569916 C2orf40Q9H1Z8 148 aa14.42□□□□□ -0.1
CNOT1-220ENST00000569916 UBE2ZQ9H832 354 aaPredicted RBP14.42□□□□□ -0.1
CNOT1-220ENST00000569916 RSAD1Q9HA92 442 aa14.42□□□□□ -0.1
CNOT1-220ENST00000569916 POLD4Q9HCU8 107 aa14.42□□□□□ -0.1
CNOT1-220ENST00000569916 PRMT7Q9NVM4 692 aaPredicted RBP14.42□□□□□ -0.1
CNOT1-220ENST00000569916 INPP5FQ9Y2H2 1132 aa14.42□□□□□ -0.1
CNOT1-220ENST00000569916 IPPQ9Y573 584 aa14.42□□□□□ -0.1
CNOT1-220ENST00000569916 CNTNAP2Q9UHC6 1331 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.41□□□□□ -0.1
CNOT1-220ENST00000569916 STX6O43752 255 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 PPM1AP35813 382 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 KCNQ1P51787 676 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 PLCB3Q01970 1234 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 UBE3AQ05086 875 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 NCBP1Q09161 790 aaKnown RBP14.41□□□□□ -0.1
CNOT1-220ENST00000569916 HYAL1Q12794 435 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 MAPK7Q13164 816 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 PPP2R5AQ15172 486 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 PTPAQ15257 358 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 ZRSR1Q15695 479 aaKnown RBP14.41□□□□□ -0.1
CNOT1-220ENST00000569916 FAM187BQ17R55 369 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 AAK1Q2M2I8 961 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 NOMO2Q5JPE7 1267 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 RINT1Q6NUQ1 792 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 FAM173BQ6P4H8 233 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 C1orf186Q6ZWK4 172 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 CABP7Q86V35 215 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 CDR2LQ86X02 465 aaPredicted RBP14.41□□□□□ -0.1
CNOT1-220ENST00000569916 DAW1Q8N136 415 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 KCTD17Q8N5Z5 321 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 CNNM3Q8NE01 707 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 DEPTORQ8TB45 409 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 PRIMPOLQ96LW4 560 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 KIFC3Q9BVG8 833 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 CCDC113Q9H0I3 377 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 FZD8Q9H461 694 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 TBC1D13Q9NVG8 400 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 PCDHGC5Q9Y5F6 944 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 CLIC4Q9Y696 253 aa14.41□□□□□ -0.1
CNOT1-220ENST00000569916 VCANP13611 3396 aa14.4□□□□□ -0.1
CNOT1-220ENST00000569916 A0A0C4DFX4 3053 aa14.4□□□□□ -0.1
CNOT1-220ENST00000569916 A0A1B0GUA9 196 aa14.4□□□□□ -0.1
CNOT1-220ENST00000569916 TTLL13PA6NNM8 815 aa14.4□□□□□ -0.1
CNOT1-220ENST00000569916 B4GALT3O60512 393 aa14.4□□□□□ -0.1
CNOT1-220ENST00000569916 HIP1RO75146 1068 aa14.4□□□□□ -0.1
CNOT1-220ENST00000569916 EDN1P05305 212 aa14.4□□□□□ -0.1
CNOT1-220ENST00000569916 BMP1P13497 986 aa14.4□□□□□ -0.1
CNOT1-220ENST00000569916 LONP1P36776 959 aaKnown RBP14.4□□□□□ -0.1
CNOT1-220ENST00000569916 AFF1P51825 1210 aaKnown RBP14.4□□□□□ -0.1
CNOT1-220ENST00000569916 BCAR1P56945 870 aa14.4□□□□□ -0.1
CNOT1-220ENST00000569916 SLC27A1Q6PCB7 646 aa14.4□□□□□ -0.1
CNOT1-220ENST00000569916 ADGRD2Q7Z7M1 963 aa14.4□□□□□ -0.1
CNOT1-220ENST00000569916 SLC39A11Q8N1S5 342 aa14.4□□□□□ -0.1
CNOT1-220ENST00000569916 LRRC15Q8TF66 581 aa14.4□□□□□ -0.1
CNOT1-220ENST00000569916 MRPS27Q92552 414 aaKnown RBP14.4□□□□□ -0.1
CNOT1-220ENST00000569916 SYMPKQ92797 1274 aaKnown RBP14.4□□□□□ -0.1
CNOT1-220ENST00000569916 PABPC5Q96DU9 382 aaKnown RBP14.4□□□□□ -0.1
CNOT1-220ENST00000569916 IFT74Q96LB3 600 aa14.4□□□□□ -0.1
CNOT1-220ENST00000569916 PLIN2Q99541 437 aa14.4□□□□□ -0.1
CNOT1-220ENST00000569916 NXF3Q9H4D5 531 aaKnown RBP14.4□□□□□ -0.1
CNOT1-220ENST00000569916 NRDE2Q9H7Z3 1164 aa14.4□□□□□ -0.1
CNOT1-220ENST00000569916 TLR9Q9NR96 1032 aa14.4□□□□□ -0.1
CNOT1-220ENST00000569916 LZTS1Q9Y250 596 aa14.4□□□□□ -0.1
CNOT1-220ENST00000569916 HES2Q9Y543 173 aa14.4□□□□□ -0.1
CNOT1-220ENST00000569916 FSCN2O14926 492 aa14.39□□□□□ -0.11
CNOT1-220ENST00000569916 INPPL1O15357 1258 aa14.39□□□□□ -0.11
CNOT1-220ENST00000569916 SLC26A4O43511 780 aa14.39□□□□□ -0.11
CNOT1-220ENST00000569916 ZC3H11AO75152 810 aaKnown RBP eCLIP14.39□□□□□ -0.11
CNOT1-220ENST00000569916 NPTXRO95502 500 aa14.39□□□□□ -0.11
CNOT1-220ENST00000569916 PRKCBP05771 671 aa14.39□□□□□ -0.11
CNOT1-220ENST00000569916 ITGA4P13612 1032 aa14.39□□□□□ -0.11
CNOT1-220ENST00000569916 KCNA5P22460 613 aa14.39□□□□□ -0.11
CNOT1-220ENST00000569916 GUCY2CP25092 1073 aa14.39□□□□□ -0.11
CNOT1-220ENST00000569916 GTF2F1P35269 517 aaKnown RBP eCLIP14.39□□□□□ -0.118e-10■■■■□ 19.3
CNOT1-220ENST00000569916 SLC12A3P55017 1021 aa14.39□□□□□ -0.11
CNOT1-220ENST00000569916 ERVFC1P60507 584 aa14.39□□□□□ -0.11
CNOT1-220ENST00000569916 MAPK6Q16659 721 aa14.39□□□□□ -0.11
CNOT1-220ENST00000569916 CTC1Q2NKJ3 1217 aa14.39□□□□□ -0.11
CNOT1-220ENST00000569916 TMEM173Q86WV6 379 aaPredicted RBP14.39□□□□□ -0.11
CNOT1-220ENST00000569916 SYT2Q8N9I0 419 aaPredicted RBP14.39□□□□□ -0.11
CNOT1-220ENST00000569916 URGCPQ8TCY9 931 aa14.39□□□□□ -0.11
CNOT1-220ENST00000569916 CDK5RAP3Q96JB5 506 aa14.39□□□□□ -0.11
CNOT1-220ENST00000569916 DRC1Q96MC2 740 aa14.39□□□□□ -0.11
CNOT1-220ENST00000569916 TRIM6Q9C030 488 aaPredicted RBP14.39□□□□□ -0.11
CNOT1-220ENST00000569916 RNF39Q9H2S5 420 aa14.39□□□□□ -0.11
CNOT1-220ENST00000569916 PDZD7Q9H5P4 517 aa14.39□□□□□ -0.11
CNOT1-220ENST00000569916 SPG21Q9NZD8 308 aa14.39□□□□□ -0.11
CNOT1-220ENST00000569916 FBXO2Q9UK22 296 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms