RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 TBX21Q9UL17 535 aa13.54□□□□□ -0.24
NUP93-220ENST00000569842 CTNND2Q9UQB3 1225 aa13.54□□□□□ -0.24
NUP93-220ENST00000569842 PITPNM1O00562 1244 aa13.54□□□□□ -0.24
NUP93-220ENST00000569842 PPP1R2P41236 205 aa13.54□□□□□ -0.24
NUP93-220ENST00000569842 LRRC8DQ7L1W4 858 aa13.54□□□□□ -0.24
NUP93-220ENST00000569842 BICD1Q96G01 975 aa13.54□□□□□ -0.24
NUP93-220ENST00000569842 TMEM206Q9H813 350 aa13.54□□□□□ -0.24
NUP93-220ENST00000569842 PRDM5Q9NQX1 630 aaPredicted RBP13.54□□□□□ -0.24
NUP93-220ENST00000569842 PRMT7Q9NVM4 692 aaPredicted RBP13.54□□□□□ -0.24
NUP93-220ENST00000569842 EXOC7Q9UPT5 735 aa13.54□□□□□ -0.24
NUP93-220ENST00000569842 NOC2LQ9Y3T9 749 aaKnown RBP13.54□□□□□ -0.24
NUP93-220ENST00000569842 TTLL13PA6NNM8 815 aa13.54□□□□□ -0.24
NUP93-220ENST00000569842 B4GALT5O43286 388 aa13.54□□□□□ -0.24
NUP93-220ENST00000569842 GHRP10912 638 aa13.54□□□□□ -0.24
NUP93-220ENST00000569842 STX17P56962 302 aa13.54□□□□□ -0.24
NUP93-220ENST00000569842 FBXO47Q5MNV8 452 aa13.54□□□□□ -0.24
NUP93-220ENST00000569842 CATSPER4Q7RTX7 472 aa13.54□□□□□ -0.24
NUP93-220ENST00000569842 NELFBQ8WX92 580 aa13.54□□□□□ -0.24
NUP93-220ENST00000569842 DHTKD1Q96HY7 919 aaPredicted RBP13.54□□□□□ -0.24
NUP93-220ENST00000569842 KCTD10Q9H3F6 313 aa13.54□□□□□ -0.24
NUP93-220ENST00000569842 SEMA6BQ9H3T3 888 aa13.54□□□□□ -0.24
NUP93-220ENST00000569842 TSPY26PQ9H489 355 aa13.54□□□□□ -0.24
NUP93-220ENST00000569842 ZMYM2Q9UBW7 1377 aa13.53□□□□□ -0.24
NUP93-220ENST00000569842 ACKR2O00590 384 aa13.53□□□□□ -0.24
NUP93-220ENST00000569842 RPS6KA5O75582 802 aa13.53□□□□□ -0.24
NUP93-220ENST00000569842 ERLIN2O94905 339 aa13.53□□□□□ -0.24
NUP93-220ENST00000569842 SFPQP23246 707 aaKnown RBP eCLIP13.53□□□□□ -0.24
NUP93-220ENST00000569842 PAK1Q13153 545 aa13.53□□□□□ -0.24
NUP93-220ENST00000569842 PRPF4BQ13523 1007 aaKnown RBP13.53□□□□□ -0.24
NUP93-220ENST00000569842 AMHR2Q16671 573 aa13.53□□□□□ -0.24
NUP93-220ENST00000569842 TARS2Q9BW92 718 aaKnown RBP13.53□□□□□ -0.24
NUP93-220ENST00000569842 GBP3Q9H0R5 595 aa13.53□□□□□ -0.24
NUP93-220ENST00000569842 TISP43B9A030 160 aa13.53□□□□□ -0.24
NUP93-220ENST00000569842 HNRNPDLO14979 420 aaKnown RBP13.53□□□□□ -0.24
NUP93-220ENST00000569842 CYP2C18P33260 490 aa13.53□□□□□ -0.24
NUP93-220ENST00000569842 PMS1P54277 932 aaKnown RBP13.53□□□□□ -0.24
NUP93-220ENST00000569842 CCL23P55773 120 aa13.53□□□□□ -0.24
NUP93-220ENST00000569842 LPIN1Q14693 890 aa13.53□□□□□ -0.24
NUP93-220ENST00000569842 MBTPS1Q14703 1052 aa13.53□□□□□ -0.24
NUP93-220ENST00000569842 FAM187BQ17R55 369 aa13.53□□□□□ -0.24
NUP93-220ENST00000569842 CENPPQ6IPU0 288 aa13.53□□□□□ -0.24
NUP93-220ENST00000569842 FAM228AQ86W67 206 aa13.53□□□□□ -0.24
NUP93-220ENST00000569842 P2RX5Q93086 422 aa13.53□□□□□ -0.24
NUP93-220ENST00000569842 MRPL4Q9BYD3 311 aaKnown RBP13.53□□□□□ -0.24
NUP93-220ENST00000569842 AGO3Q9H9G7 860 aaKnown RBP13.53□□□□□ -0.24
NUP93-220ENST00000569842 TRIM49BA6NDI0 452 aa13.52□□□□□ -0.24
NUP93-220ENST00000569842 TGFB1I1O43294 461 aa13.52□□□□□ -0.24
NUP93-220ENST00000569842 TSPAN1O60635 241 aa13.52□□□□□ -0.24
NUP93-220ENST00000569842 CCNE1P24864 410 aa13.52□□□□□ -0.24
NUP93-220ENST00000569842 LIG4P49917 911 aa13.52□□□□□ -0.24
NUP93-220ENST00000569842 TMEM132AQ24JP5 1023 aa13.52□□□□□ -0.24
NUP93-220ENST00000569842 PPP4R3CPQ6ZMV5 832 aa13.52□□□□□ -0.24
NUP93-220ENST00000569842 PRIMPOLQ96LW4 560 aa13.52□□□□□ -0.24
NUP93-220ENST00000569842 NAT10Q9H0A0 1025 aaKnown RBP13.52□□□□□ -0.24
NUP93-220ENST00000569842 TRIM43BA6NCK2 446 aa13.52□□□□□ -0.25
NUP93-220ENST00000569842 ANKRD63C9JTQ0 380 aa13.52□□□□□ -0.25
NUP93-220ENST00000569842 ERCC5P28715 1186 aaPredicted RBP13.52□□□□□ -0.25
NUP93-220ENST00000569842 CD52P31358 61 aa13.52□□□□□ -0.25
NUP93-220ENST00000569842 NFX1Q12986 1120 aaKnown RBP13.52□□□□□ -0.25
NUP93-220ENST00000569842 ANKRD40Q6AI12 368 aa13.52□□□□□ -0.25
NUP93-220ENST00000569842 TRIM43Q96BQ3 446 aaPredicted RBP13.52□□□□□ -0.25
NUP93-220ENST00000569842 SCLYQ96I15 445 aa13.52□□□□□ -0.25
NUP93-220ENST00000569842 CPB2Q96IY4 423 aa13.52□□□□□ -0.25
NUP93-220ENST00000569842 MED15Q96RN5 788 aa13.52□□□□□ -0.25
NUP93-220ENST00000569842 ACO2Q99798 780 aaKnown RBP13.52□□□□□ -0.25
NUP93-220ENST00000569842 WNT8AQ9H1J5 351 aa13.52□□□□□ -0.25
NUP93-220ENST00000569842 TYW1Q9NV66 732 aaKnown RBP13.52□□□□□ -0.25
NUP93-220ENST00000569842 RWDD2AQ9UIY3 292 aa13.52□□□□□ -0.25
NUP93-220ENST00000569842 ST3GAL5Q9UNP4 418 aa13.52□□□□□ -0.25
NUP93-220ENST00000569842 PDXKO00764 312 aa13.51□□□□□ -0.25
NUP93-220ENST00000569842 PIGRP01833 764 aa13.51□□□□□ -0.25
NUP93-220ENST00000569842 ARF4P18085 180 aaPredicted RBP13.51□□□□□ -0.25
NUP93-220ENST00000569842 ZNF165P49910 485 aa13.51□□□□□ -0.25
NUP93-220ENST00000569842 PCBP1Q15365 356 aaKnown RBP eCLIP13.51□□□□□ -0.25
NUP93-220ENST00000569842 CT47A1Q5JQC4 288 aaPredicted RBP13.51□□□□□ -0.25
NUP93-220ENST00000569842 SLC39A4Q6P5W5 647 aa13.51□□□□□ -0.25
NUP93-220ENST00000569842 TSHZ1Q6ZSZ6 1077 aa13.51□□□□□ -0.25
NUP93-220ENST00000569842 HS2ST1Q7LGA3 356 aa13.51□□□□□ -0.25
NUP93-220ENST00000569842 PADI3Q9ULW8 664 aa13.51□□□□□ -0.25
NUP93-220ENST00000569842 SQORQ9Y6N5 450 aa13.51□□□□□ -0.25
NUP93-220ENST00000569842 CNTNAP2Q9UHC6 1331 aa13.51□□□□□ -0.25
NUP93-220ENST00000569842 KIAA0355O15063 1070 aa13.51□□□□□ -0.25
NUP93-220ENST00000569842 CLIC2O15247 247 aa13.51□□□□□ -0.25
NUP93-220ENST00000569842 NCBP1Q09161 790 aaKnown RBP13.51□□□□□ -0.25
NUP93-220ENST00000569842 PAK2Q13177 524 aa13.51□□□□□ -0.25
NUP93-220ENST00000569842 ZCWPW2Q504Y3 356 aa13.51□□□□□ -0.25
NUP93-220ENST00000569842 ATF7IP2Q5U623 682 aa13.51□□□□□ -0.25
NUP93-220ENST00000569842 ZPBP2Q6X784 338 aa13.51□□□□□ -0.25
NUP93-220ENST00000569842 CDR2LQ86X02 465 aaPredicted RBP13.51□□□□□ -0.25
NUP93-220ENST00000569842 USP38Q8NB14 1042 aa13.51□□□□□ -0.25
NUP93-220ENST00000569842 ZBTB45Q96K62 511 aaPredicted RBP13.51□□□□□ -0.25
NUP93-220ENST00000569842 TSG101Q99816 390 aa13.51□□□□□ -0.25
NUP93-220ENST00000569842 HTATIP2Q9BUP3 242 aa13.51□□□□□ -0.25
NUP93-220ENST00000569842 AGPAT3Q9NRZ7 376 aa13.51□□□□□ -0.25
NUP93-220ENST00000569842 BICDL2A1A5D9 508 aa13.5□□□□□ -0.25
NUP93-220ENST00000569842 GPR182O15218 404 aa13.5□□□□□ -0.25
NUP93-220ENST00000569842 NBNO60934 754 aa13.5□□□□□ -0.25
NUP93-220ENST00000569842 ITGB8P26012 769 aa13.5□□□□□ -0.25
NUP93-220ENST00000569842 HOXA11P31270 313 aaPredicted RBP13.5□□□□□ -0.25
NUP93-220ENST00000569842 GPNMBQ14956 572 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms