RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 B3GALT6Q96L58 329 aa13.53□□□□□ -0.24
CAPN3-220ENST00000569827 AGXT2Q9BYV1 514 aa13.53□□□□□ -0.24
CAPN3-220ENST00000569827 SFXN1Q9H9B4 322 aa13.53□□□□□ -0.24
CAPN3-220ENST00000569827 CYP26B1Q9NR63 512 aa13.53□□□□□ -0.24
CAPN3-220ENST00000569827 GJB4Q9NTQ9 266 aa13.53□□□□□ -0.24
CAPN3-220ENST00000569827 AGPAT5Q9NUQ2 364 aa13.53□□□□□ -0.24
CAPN3-220ENST00000569827 DDX25Q9UHL0 483 aaKnown RBP13.53□□□□□ -0.24
CAPN3-220ENST00000569827 COL4A3BPQ9Y5P4 624 aa13.53□□□□□ -0.24
CAPN3-220ENST00000569827 M0R2N6 131 aa13.52□□□□□ -0.25
CAPN3-220ENST00000569827 ZBTB39O15060 712 aa13.52□□□□□ -0.25
CAPN3-220ENST00000569827 SPATA31D3P0C874 917 aa13.52□□□□□ -0.25
CAPN3-220ENST00000569827 NPR3P17342 541 aa13.52□□□□□ -0.25
CAPN3-220ENST00000569827 POLGP54098 1239 aaPredicted RBP13.52□□□□□ -0.25
CAPN3-220ENST00000569827 AK2P54819 239 aa13.52□□□□□ -0.25
CAPN3-220ENST00000569827 SSRP1Q08945 709 aaKnown RBP13.52□□□□□ -0.25
CAPN3-220ENST00000569827 LETM2Q2VYF4 491 aa13.52□□□□□ -0.25
CAPN3-220ENST00000569827 UBXN11Q5T124 520 aa13.52□□□□□ -0.25
CAPN3-220ENST00000569827 SPATA31D4Q6ZUB0 917 aa13.52□□□□□ -0.25
CAPN3-220ENST00000569827 GPR149Q86SP6 731 aa13.52□□□□□ -0.25
CAPN3-220ENST00000569827 RDM1Q8NG50 284 aa13.52□□□□□ -0.25
CAPN3-220ENST00000569827 URGCPQ8TCY9 931 aa13.52□□□□□ -0.25
CAPN3-220ENST00000569827 TRAIPQ9BWF2 469 aa13.52□□□□□ -0.25
CAPN3-220ENST00000569827 APOL6Q9BWW8 343 aa13.52□□□□□ -0.25
CAPN3-220ENST00000569827 SLKQ9H2G2 1235 aaPredicted RBP13.52□□□□□ -0.25
CAPN3-220ENST00000569827 RSAD1Q9HA92 442 aa13.52□□□□□ -0.25
CAPN3-220ENST00000569827 MAN1C1Q9NR34 630 aa13.52□□□□□ -0.25
CAPN3-220ENST00000569827 MARCH5Q9NX47 278 aa13.52□□□□□ -0.25
CAPN3-220ENST00000569827 VAV3Q9UKW4 847 aa13.52□□□□□ -0.25
CAPN3-220ENST00000569827 HES2Q9Y543 173 aa13.52□□□□□ -0.25
CAPN3-220ENST00000569827 IRAK3Q9Y616 596 aa13.52□□□□□ -0.25
CAPN3-220ENST00000569827 NOTCH4Q99466 2003 aa13.51□□□□□ -0.25
CAPN3-220ENST00000569827 NRP1O14786 923 aa13.51□□□□□ -0.25
CAPN3-220ENST00000569827 ZNF623O75123 536 aa13.51□□□□□ -0.25
CAPN3-220ENST00000569827 RFPL2O75678 378 aa13.51□□□□□ -0.25
CAPN3-220ENST00000569827 HOXA11P31270 313 aaPredicted RBP13.51□□□□□ -0.25
CAPN3-220ENST00000569827 NBL1P41271 181 aa13.51□□□□□ -0.25
CAPN3-220ENST00000569827 RAB27AP51159 221 aa13.51□□□□□ -0.25
CAPN3-220ENST00000569827 PSMC5P62195 406 aa13.51□□□□□ -0.25
CAPN3-220ENST00000569827 CENPQQ7L2Z9 268 aaPredicted RBP13.51□□□□□ -0.25
CAPN3-220ENST00000569827 GLYCTKQ8IVS8 523 aa13.51□□□□□ -0.25
CAPN3-220ENST00000569827 SIX5Q8N196 739 aa13.51□□□□□ -0.25
CAPN3-220ENST00000569827 ZNF710Q8N1W2 664 aa13.51□□□□□ -0.25
CAPN3-220ENST00000569827 PRPF31Q8WWY3 499 aaKnown RBP13.51□□□□□ -0.25
CAPN3-220ENST00000569827 RABGGTAQ92696 567 aa13.51□□□□□ -0.25
CAPN3-220ENST00000569827 CPB2Q96IY4 423 aa13.51□□□□□ -0.25
CAPN3-220ENST00000569827 CEP170P1Q96L14 293 aa13.51□□□□□ -0.25
CAPN3-220ENST00000569827 FAM193BQ96PV7 902 aaPredicted RBP13.51□□□□□ -0.25
CAPN3-220ENST00000569827 EIF2AQ9BY44 585 aaKnown RBP13.51□□□□□ -0.25
CAPN3-220ENST00000569827 RNF39Q9H2S5 420 aa13.51□□□□□ -0.25
CAPN3-220ENST00000569827 KCNK12Q9HB15 430 aa13.51□□□□□ -0.25
CAPN3-220ENST00000569827 RGL1Q9NZL6 768 aa13.51□□□□□ -0.25
CAPN3-220ENST00000569827 CACNG4Q9UBN1 327 aa13.51□□□□□ -0.25
CAPN3-220ENST00000569827 FBXL21Q9UKT6 434 aa13.51□□□□□ -0.25
CAPN3-220ENST00000569827 FAN1Q9Y2M0 1017 aa13.51□□□□□ -0.25
CAPN3-220ENST00000569827 DNAH14Q0VDD8 3507 aa13.51□□□□□ -0.25
CAPN3-220ENST00000569827 PATJQ8NI35 1801 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 CEP250Q9BV73 2442 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 CYP3A7-CYP3A51PA0A087WV96 503 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 FAM205CA6NFA0 338 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 PROB1E7EW31 1015 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 LILRB3O75022 631 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 CFHP08603 1231 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 CYP3A7P24462 503 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 GBP2P32456 591 aaPredicted RBP13.5□□□□□ -0.25
CAPN3-220ENST00000569827 MLH1P40692 756 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 OR1G1P47890 313 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 CYP4A11Q02928 519 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 LAMTOR4Q0VGL1 99 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 TDGQ13569 410 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 EMC2Q15006 297 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 NONOQ15233 471 aaKnown RBP eCLIP13.5□□□□□ -0.25
CAPN3-220ENST00000569827 CDR2LQ86X02 465 aaPredicted RBP13.5□□□□□ -0.25
CAPN3-220ENST00000569827 TRIM22Q8IYM9 498 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 PLCD3Q8N3E9 789 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 SMG8Q8ND04 991 aaKnown RBP13.5□□□□□ -0.25
CAPN3-220ENST00000569827 ACSF2Q96CM8 615 aaPredicted RBP13.5□□□□□ -0.25
CAPN3-220ENST00000569827 PGBD4Q96DM1 585 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 ZFP42Q96MM3 310 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 MBOAT7Q96N66 472 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 GAD1Q99259 594 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 EMILIN2Q9BXX0 1053 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 INO80BQ9C086 356 aaPredicted RBP13.5□□□□□ -0.25
CAPN3-220ENST00000569827 IRF2BPLQ9H1B7 796 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 SH3GLB2Q9NR46 395 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 MIOSQ9NXC5 875 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 CA14Q9ULX7 337 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 DUSP12Q9UNI6 340 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 USTQ9Y2C2 406 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 OTOGLQ3ZCN5 2332 aa13.5□□□□□ -0.25
CAPN3-220ENST00000569827 CPLX1O14810 134 aa13.49□□□□□ -0.25
CAPN3-220ENST00000569827 INPPL1O15357 1258 aa13.49□□□□□ -0.25
CAPN3-220ENST00000569827 TEX28O15482 410 aa13.49□□□□□ -0.25
CAPN3-220ENST00000569827 URODP06132 367 aa13.49□□□□□ -0.25
CAPN3-220ENST00000569827 SKIP12755 728 aa13.49□□□□□ -0.25
CAPN3-220ENST00000569827 QARSP47897 775 aaKnown RBP13.49□□□□□ -0.25
CAPN3-220ENST00000569827 SCNN1GP51170 649 aa13.49□□□□□ -0.25
CAPN3-220ENST00000569827 GIT2Q14161 759 aa13.49□□□□□ -0.25
CAPN3-220ENST00000569827 CTTNQ14247 550 aaKnown RBP13.49□□□□□ -0.25
CAPN3-220ENST00000569827 NCAPH2Q6IBW4 605 aa13.49□□□□□ -0.25
CAPN3-220ENST00000569827 OTOP3Q7RTS5 596 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms