RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 UCHL3P15374 230 aa24.56■■□□□ 1.52
VCPKMT-205ENST00000569518 ETF1P62495 437 aaKnown RBP24.56■■□□□ 1.52
VCPKMT-205ENST00000569518 TRAPPC12Q8WVT3 735 aa24.56■■□□□ 1.52
VCPKMT-205ENST00000569518 SAAL1Q96ER3 474 aa24.56■■□□□ 1.52
VCPKMT-205ENST00000569518 JPH2Q9BR39 696 aaPredicted RBP24.56■■□□□ 1.52
VCPKMT-205ENST00000569518 A0A0U1RQJ8 604 aa24.56■■□□□ 1.52
VCPKMT-205ENST00000569518 GOLGA8IPA6NC78 632 aa24.56■■□□□ 1.52
VCPKMT-205ENST00000569518 TMEM88BA6NKF7 163 aa24.56■■□□□ 1.52
VCPKMT-205ENST00000569518 GOLGA8JA6NMD2 632 aa24.56■■□□□ 1.52
VCPKMT-205ENST00000569518 STRN3Q13033 797 aa24.56■■□□□ 1.52
VCPKMT-205ENST00000569518 CDCA2Q69YH5 1023 aaPredicted RBP24.56■■□□□ 1.52
VCPKMT-205ENST00000569518 ATRIPQ8WXE1 791 aa24.56■■□□□ 1.52
VCPKMT-205ENST00000569518 PSPC1Q8WXF1 523 aaKnown RBP24.56■■□□□ 1.52
VCPKMT-205ENST00000569518 POMGNT1Q8WZA1 660 aa24.56■■□□□ 1.52
VCPKMT-205ENST00000569518 BICD1Q96G01 975 aa24.56■■□□□ 1.52
VCPKMT-205ENST00000569518 PRIMPOLQ96LW4 560 aa24.56■■□□□ 1.52
VCPKMT-205ENST00000569518 GJD2Q9UKL4 321 aa24.56■■□□□ 1.52
VCPKMT-205ENST00000569518 K7ERI5 159 aa24.55■■□□□ 1.52
VCPKMT-205ENST00000569518 ECM2O94769 699 aaPredicted RBP24.55■■□□□ 1.52
VCPKMT-205ENST00000569518 C22orf31O95567 290 aa24.55■■□□□ 1.52
VCPKMT-205ENST00000569518 PLEKP08567 350 aaPredicted RBP24.55■■□□□ 1.52
VCPKMT-205ENST00000569518 MYL7Q01449 175 aa24.55■■□□□ 1.52
VCPKMT-205ENST00000569518 LAMTOR4Q0VGL1 99 aa24.55■■□□□ 1.52
VCPKMT-205ENST00000569518 MXD4Q14582 209 aaPredicted RBP24.55■■□□□ 1.52
VCPKMT-205ENST00000569518 ZNF484Q5JVG2 852 aa24.55■■□□□ 1.52
VCPKMT-205ENST00000569518 HGSNATQ68CP4 663 aa24.55■■□□□ 1.52
VCPKMT-205ENST00000569518 LRRC71Q8N4P6 559 aa24.55■■□□□ 1.52
VCPKMT-205ENST00000569518 SUGCTQ9HAC7 445 aa24.55■■□□□ 1.52
VCPKMT-205ENST00000569518 FHOD1Q9Y613 1164 aa24.55■■□□□ 1.52
VCPKMT-205ENST00000569518 MGAMO43451 1857 aa24.55■■□□□ 1.52
VCPKMT-205ENST00000569518 EIF3CLB5ME19 914 aaKnown RBP24.54■■□□□ 1.52
VCPKMT-205ENST00000569518 MMP3P08254 477 aa24.54■■□□□ 1.52
VCPKMT-205ENST00000569518 ZNF286BP0CG31 522 aa24.54■■□□□ 1.52
VCPKMT-205ENST00000569518 CYLC1P35663 651 aaPredicted RBP24.54■■□□□ 1.52
VCPKMT-205ENST00000569518 LIG4P49917 911 aa24.54■■□□□ 1.52
VCPKMT-205ENST00000569518 PPP3CAQ08209 521 aa24.54■■□□□ 1.52
VCPKMT-205ENST00000569518 SFMBT2Q5VUG0 894 aa24.54■■□□□ 1.52
VCPKMT-205ENST00000569518 OLFML2BQ68BL8 750 aa24.54■■□□□ 1.52
VCPKMT-205ENST00000569518 MFSD14AQ96MC6 490 aa24.54■■□□□ 1.52
VCPKMT-205ENST00000569518 EIF3CQ99613 913 aaKnown RBP24.54■■□□□ 1.52
VCPKMT-205ENST00000569518 CCDC113Q9H0I3 377 aa24.54■■□□□ 1.52
VCPKMT-205ENST00000569518 AIPL1Q9NZN9 384 aa24.54■■□□□ 1.52
VCPKMT-205ENST00000569518 MYO6Q9UM54 1294 aa24.54■■□□□ 1.52
VCPKMT-205ENST00000569518 PMM2O15305 246 aa24.54■■□□□ 1.52
VCPKMT-205ENST00000569518 EDN1P05305 212 aa24.54■■□□□ 1.52
VCPKMT-205ENST00000569518 INSRRP14616 1297 aa24.54■■□□□ 1.52
VCPKMT-205ENST00000569518 TERF1P54274 439 aa24.54■■□□□ 1.52
VCPKMT-205ENST00000569518 ENPEPQ07075 957 aa24.54■■□□□ 1.52
VCPKMT-205ENST00000569518 OR6J1Q8NGC5 347 aa24.54■■□□□ 1.52
VCPKMT-205ENST00000569518 SOCS4Q8WXH5 440 aa24.54■■□□□ 1.52
VCPKMT-205ENST00000569518 PAXBP1Q9Y5B6 917 aa24.54■■□□□ 1.52
VCPKMT-205ENST00000569518 P4HA2O15460 535 aa24.53■■□□□ 1.52
VCPKMT-205ENST00000569518 CA12O43570 354 aa24.53■■□□□ 1.52
VCPKMT-205ENST00000569518 N4BP1O75113 896 aaKnown RBP24.53■■□□□ 1.52
VCPKMT-205ENST00000569518 ZNF865P0CJ78 1059 aaPredicted RBP24.53■■□□□ 1.52
VCPKMT-205ENST00000569518 RGS2P41220 211 aa24.53■■□□□ 1.52
VCPKMT-205ENST00000569518 ARHGAP25P42331 645 aa24.53■■□□□ 1.52
VCPKMT-205ENST00000569518 EFNA5P52803 228 aa24.53■■□□□ 1.52
VCPKMT-205ENST00000569518 TNFAIP2Q03169 654 aa24.53■■□□□ 1.52
VCPKMT-205ENST00000569518 MAPK8IP2Q13387 824 aaPredicted RBP24.53■■□□□ 1.52
VCPKMT-205ENST00000569518 CCL14Q16627 93 aa24.53■■□□□ 1.52
VCPKMT-205ENST00000569518 GPD1LQ8N335 351 aa24.53■■□□□ 1.52
VCPKMT-205ENST00000569518 LMO3Q8TAP4 145 aa24.53■■□□□ 1.52
VCPKMT-205ENST00000569518 APBA2Q99767 749 aa24.53■■□□□ 1.52
VCPKMT-205ENST00000569518 AJAP1Q9UKB5 411 aaPredicted RBP24.53■■□□□ 1.52
VCPKMT-205ENST00000569518 GNEQ9Y223 722 aaKnown RBP24.53■■□□□ 1.52
VCPKMT-205ENST00000569518 COL1A2P08123 1366 aa24.53■■□□□ 1.52
VCPKMT-205ENST00000569518 ZSWIM8A7E2V4 1837 aa24.53■■□□□ 1.52
VCPKMT-205ENST00000569518 CTGFP29279 349 aa24.52■■□□□ 1.52
VCPKMT-205ENST00000569518 JAM2P57087 298 aa24.52■■□□□ 1.52
VCPKMT-205ENST00000569518 PRAMEF19Q5SWL8 479 aa24.52■■□□□ 1.52
VCPKMT-205ENST00000569518 SYT10Q6XYQ8 523 aa24.52■■□□□ 1.52
VCPKMT-205ENST00000569518 LINC01465Q8N7H1 131 aa24.52■■□□□ 1.52
VCPKMT-205ENST00000569518 KIF18AQ8NI77 898 aa24.52■■□□□ 1.52
VCPKMT-205ENST00000569518 TMC2Q8TDI7 906 aa24.52■■□□□ 1.52
VCPKMT-205ENST00000569518 PARD3BQ8TEW8 1205 aa24.52■■□□□ 1.52
VCPKMT-205ENST00000569518 ZNF592Q92610 1267 aa24.52■■□□□ 1.52
VCPKMT-205ENST00000569518 INTS2Q9H0H0 1204 aaKnown RBP24.52■■□□□ 1.52
VCPKMT-205ENST00000569518 SUCLA2Q9P2R7 463 aaPredicted RBP24.52■■□□□ 1.52
VCPKMT-205ENST00000569518 USP20Q9Y2K6 914 aa24.52■■□□□ 1.52
VCPKMT-205ENST00000569518 SSU72P8A0A1W2PR75 194 aa24.51■■□□□ 1.51
VCPKMT-205ENST00000569518 KIAA0391O15091 583 aaKnown RBP24.51■■□□□ 1.51
VCPKMT-205ENST00000569518 FANCGO15287 622 aa24.51■■□□□ 1.51
VCPKMT-205ENST00000569518 LCA5LO95447 670 aa24.51■■□□□ 1.51
VCPKMT-205ENST00000569518 EIF4A3P38919 411 aaKnown RBP24.51■■□□□ 1.51
VCPKMT-205ENST00000569518 CYP24A1Q07973 514 aa24.51■■□□□ 1.51
VCPKMT-205ENST00000569518 ASTE1Q2TB18 679 aaPredicted RBP24.51■■□□□ 1.51
VCPKMT-205ENST00000569518 CCDC42Q96M95 316 aa24.51■■□□□ 1.51
VCPKMT-205ENST00000569518 HAPLN2Q9GZV7 340 aa24.51■■□□□ 1.51
VCPKMT-205ENST00000569518 LZTFL1Q9NQ48 299 aa24.51■■□□□ 1.51
VCPKMT-205ENST00000569518 ZNF215Q9UL58 517 aaPredicted RBP24.51■■□□□ 1.51
VCPKMT-205ENST00000569518 EVPLQ92817 2033 aa24.51■■□□□ 1.51
VCPKMT-205ENST00000569518 H3BRB1 525 aa24.51■■□□□ 1.51
VCPKMT-205ENST00000569518 TNPO2O14787 897 aaKnown RBP24.51■■□□□ 1.51
VCPKMT-205ENST00000569518 SERPING1P05155 500 aa24.51■■□□□ 1.51
VCPKMT-205ENST00000569518 RAPGEF1Q13905 1077 aa24.51■■□□□ 1.51
VCPKMT-205ENST00000569518 EPC2Q52LR7 807 aa24.51■■□□□ 1.51
VCPKMT-205ENST00000569518 IQCEQ6IPM2 695 aa24.51■■□□□ 1.51
VCPKMT-205ENST00000569518 EFCAB12Q6NXP0 572 aa24.51■■□□□ 1.51
VCPKMT-205ENST00000569518 ZBTB10Q96DT7 871 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms