RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 TTI1O43156 1089 aa9.48□□□□□ -0.89
LINC00558-201ENST00000569422 DLATP10515 647 aaKnown RBP9.48□□□□□ -0.89
LINC00558-201ENST00000569422 HPDP32754 393 aaPredicted RBP9.48□□□□□ -0.89
LINC00558-201ENST00000569422 PRKCIP41743 596 aa9.48□□□□□ -0.89
LINC00558-201ENST00000569422 PTGER2P43116 358 aa9.48□□□□□ -0.89
LINC00558-201ENST00000569422 ERVK-9P63128 1117 aa9.48□□□□□ -0.89
LINC00558-201ENST00000569422 ITIH3Q06033 890 aa9.48□□□□□ -0.89
LINC00558-201ENST00000569422 TTMPQ5BVD1 217 aa9.48□□□□□ -0.89
LINC00558-201ENST00000569422 ZNF572Q7Z3I7 529 aaPredicted RBP9.48□□□□□ -0.89
LINC00558-201ENST00000569422 CBWD2Q8IUF1 395 aa9.48□□□□□ -0.89
LINC00558-201ENST00000569422 LRRC57Q8N9N7 239 aa9.48□□□□□ -0.89
LINC00558-201ENST00000569422 ATG4CQ96DT6 458 aa9.48□□□□□ -0.89
LINC00558-201ENST00000569422 RPAP3Q9H6T3 665 aaPredicted RBP9.48□□□□□ -0.89
LINC00558-201ENST00000569422 AGO4Q9HCK5 861 aaKnown RBP9.48□□□□□ -0.89
LINC00558-201ENST00000569422 HSPBP1Q9NZL4 362 aa9.48□□□□□ -0.89
LINC00558-201ENST00000569422 RNF14Q9UBS8 474 aa9.48□□□□□ -0.89
LINC00558-201ENST00000569422 SEL1LQ9UBV2 794 aa9.48□□□□□ -0.89
LINC00558-201ENST00000569422 DHX15O43143 795 aaKnown RBP9.47□□□□□ -0.89
LINC00558-201ENST00000569422 DAPK3O43293 454 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 SH3BP5O60239 455 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 GNGT1P63211 74 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 NNTQ13423 1086 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 BAATQ14032 418 aaPredicted RBP9.47□□□□□ -0.89
LINC00558-201ENST00000569422 C10orf76Q5T2E6 689 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 NBPF12Q5TAG4 269 aaPredicted RBP9.47□□□□□ -0.89
LINC00558-201ENST00000569422 WDR78Q5VTH9 848 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 LMBRD2Q68DH5 695 aaPredicted RBP9.47□□□□□ -0.89
LINC00558-201ENST00000569422 CIAPIN1Q6FI81 312 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 RNF207Q6ZRF8 634 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 LMBR1Q8WVP7 490 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 BTBD6Q96KE9 485 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 RIT2Q99578 217 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 GPR88Q9GZN0 384 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 TOPORSQ9NS56 1045 aaPredicted RBP9.47□□□□□ -0.89
LINC00558-201ENST00000569422 KLHL42Q9P2K6 505 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 OPA1O60313 960 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 PEX10O60683 326 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 FTLP02792 175 aaPredicted RBP9.47□□□□□ -0.89
LINC00558-201ENST00000569422 VCAM1P19320 739 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 LMNB1P20700 586 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 KCNA3P22001 575 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 ZNF131P52739 623 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 CETN1Q12798 172 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 PDCLQ13371 301 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 MESDQ14696 234 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 ZC3H12AQ5D1E8 599 aaKnown RBP9.47□□□□□ -0.89
LINC00558-201ENST00000569422 CEP85LQ5SZL2 805 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 NT5DC3Q86UY8 548 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 RPUSD2Q8IZ73 545 aaKnown RBP9.47□□□□□ -0.89
LINC00558-201ENST00000569422 UBLCP1Q8WVY7 318 aaPredicted RBP9.47□□□□□ -0.89
LINC00558-201ENST00000569422 ACCSQ96QU6 501 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 TRIM51Q9BSJ1 452 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 FAM107BQ9H098 131 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 GDF3Q9NR23 364 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 QSER1Q2KHR3 1735 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 ANKRD63C9JTQ0 380 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 SGPL1O95470 568 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 GUCY2CP25092 1073 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 FLT3P36888 993 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 HSD17B4P51659 736 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 EPC2Q52LR7 807 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 GLE1Q53GS7 698 aaKnown RBP9.47□□□□□ -0.89
LINC00558-201ENST00000569422 MCF2L2Q86YR7 1114 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 XXYLT1Q8NBI6 393 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 PLEKHO2Q8TD55 490 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 CALR3Q96L12 384 aaKnown RBP9.47□□□□□ -0.89
LINC00558-201ENST00000569422 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.47□□□□□ -0.89
LINC00558-201ENST00000569422 CAPS2Q9BXY5 557 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 NEUROG2Q9H2A3 272 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 DMAC2Q9NW81 257 aa9.47□□□□□ -0.89
LINC00558-201ENST00000569422 CYP26A1O43174 497 aa9.46□□□□□ -0.89
LINC00558-201ENST00000569422 CCNE2O96020 404 aa9.46□□□□□ -0.89
LINC00558-201ENST00000569422 BCRP11274 1271 aa9.46□□□□□ -0.89
LINC00558-201ENST00000569422 PLS3P13797 630 aa9.46□□□□□ -0.89
LINC00558-201ENST00000569422 SSTR3P32745 418 aaPredicted RBP9.46□□□□□ -0.89
LINC00558-201ENST00000569422 CCT5P48643 541 aa9.46□□□□□ -0.89
LINC00558-201ENST00000569422 PGM5Q15124 567 aa9.46□□□□□ -0.89
LINC00558-201ENST00000569422 CPNE8Q86YQ8 564 aa9.46□□□□□ -0.89
LINC00558-201ENST00000569422 VTI1AQ96AJ9 217 aa9.46□□□□□ -0.89
LINC00558-201ENST00000569422 BICD1Q96G01 975 aa9.46□□□□□ -0.89
LINC00558-201ENST00000569422 PBKQ96KB5 322 aa9.46□□□□□ -0.89
LINC00558-201ENST00000569422 CAMKK2Q96RR4 588 aa9.46□□□□□ -0.89
LINC00558-201ENST00000569422 PI4K2AQ9BTU6 479 aa9.46□□□□□ -0.89
LINC00558-201ENST00000569422 KDM4CQ9H3R0 1056 aa9.46□□□□□ -0.89
LINC00558-201ENST00000569422 COG5Q9UP83 839 aa9.46□□□□□ -0.89
LINC00558-201ENST00000569422 PLAAQ9Y263 795 aa9.46□□□□□ -0.89
LINC00558-201ENST00000569422 GREB1LQ9C091 1923 aaPredicted RBP9.46□□□□□ -0.9
LINC00558-201ENST00000569422 GTPBP10A4D1E9 387 aaKnown RBP9.46□□□□□ -0.9
LINC00558-201ENST00000569422 ZNF233A6NK53 670 aa9.46□□□□□ -0.9
LINC00558-201ENST00000569422 MXI1P50539 228 aa9.46□□□□□ -0.9
LINC00558-201ENST00000569422 PPFIA1Q13136 1202 aa9.46□□□□□ -0.9
LINC00558-201ENST00000569422 C2CD6Q53TS8 623 aa9.46□□□□□ -0.9
LINC00558-201ENST00000569422 BCAS4Q8TDM0 211 aa9.46□□□□□ -0.9
LINC00558-201ENST00000569422 DHX38Q92620 1227 aaKnown RBP9.46□□□□□ -0.9
LINC00558-201ENST00000569422 PMM1Q92871 262 aa9.46□□□□□ -0.9
LINC00558-201ENST00000569422 GLG1Q92896 1179 aa9.46□□□□□ -0.9
LINC00558-201ENST00000569422 CEP170P1Q96L14 293 aa9.46□□□□□ -0.9
LINC00558-201ENST00000569422 AGPAT1Q99943 283 aa9.46□□□□□ -0.9
LINC00558-201ENST00000569422 MKNK1Q9BUB5 465 aa9.46□□□□□ -0.9
LINC00558-201ENST00000569422 GABBR1Q9UBS5 961 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms