RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 SLC39A11Q8N1S5 342 aa22.49■■□□□ 1.19
CLK3-225ENST00000569063 MICAL1Q8TDZ2 1067 aa22.49■■□□□ 1.19
CLK3-225ENST00000569063 NECAB3Q96P71 396 aaPredicted RBP22.49■■□□□ 1.19
CLK3-225ENST00000569063 CSRNP2Q9H175 543 aa22.49■■□□□ 1.19
CLK3-225ENST00000569063 BHMT2Q9H2M3 363 aa22.49■■□□□ 1.19
CLK3-225ENST00000569063 TBC1D13Q9NVG8 400 aa22.49■■□□□ 1.19
CLK3-225ENST00000569063 CNTNAP2Q9UHC6 1331 aa22.49■■□□□ 1.19
CLK3-225ENST00000569063 CARNS1A5YM72 827 aa22.48■■□□□ 1.19
CLK3-225ENST00000569063 LRRIQ4A6NIV6 560 aa22.48■■□□□ 1.19
CLK3-225ENST00000569063 PP2D1A8MPX8 630 aa22.48■■□□□ 1.19
CLK3-225ENST00000569063 H3BQ06 376 aaPredicted RBP22.48■■□□□ 1.19
CLK3-225ENST00000569063 ARF4P18085 180 aaPredicted RBP22.48■■□□□ 1.19
CLK3-225ENST00000569063 ERVFC1P60507 584 aa22.48■■□□□ 1.19
CLK3-225ENST00000569063 ARL6IP4Q66PJ3 421 aaKnown RBP22.48■■□□□ 1.19
CLK3-225ENST00000569063 EP400NLQ6ZTU2 488 aa22.48■■□□□ 1.19
CLK3-225ENST00000569063 SMG8Q8ND04 991 aaKnown RBP22.48■■□□□ 1.19
CLK3-225ENST00000569063 CPB2Q96IY4 423 aa22.48■■□□□ 1.19
CLK3-225ENST00000569063 MMTAG2Q9BU76 263 aaKnown RBP22.48■■□□□ 1.19
CLK3-225ENST00000569063 IGFLR1Q9H665 355 aa22.48■■□□□ 1.19
CLK3-225ENST00000569063 RSAD1Q9HA92 442 aa22.48■■□□□ 1.19
CLK3-225ENST00000569063 UBN1Q9NPG3 1134 aa22.48■■□□□ 1.19
CLK3-225ENST00000569063 PCDHGC5Q9Y5F6 944 aa22.48■■□□□ 1.19
CLK3-225ENST00000569063 TCF20Q9UGU0 1960 aaKnown RBP22.48■■□□□ 1.19
CLK3-225ENST00000569063 MUC3AQ02505 3323 aa22.47■■□□□ 1.19
CLK3-225ENST00000569063 GRXCR2A6NFK2 248 aa22.47■■□□□ 1.19
CLK3-225ENST00000569063 CDC25AP30304 524 aa22.47■■□□□ 1.19
CLK3-225ENST00000569063 PTCRAQ6ISU1 281 aaPredicted RBP22.47■■□□□ 1.19
CLK3-225ENST00000569063 PPP4R3CPQ6ZMV5 832 aa22.47■■□□□ 1.19
CLK3-225ENST00000569063 BRAPQ7Z569 592 aa22.47■■□□□ 1.19
CLK3-225ENST00000569063 EFHBQ8N7U6 833 aa22.47■■□□□ 1.19
CLK3-225ENST00000569063 PRIMPOLQ96LW4 560 aa22.47■■□□□ 1.19
CLK3-225ENST00000569063 EIF2AQ9BY44 585 aaKnown RBP22.47■■□□□ 1.19
CLK3-225ENST00000569063 C2orf40Q9H1Z8 148 aa22.47■■□□□ 1.19
CLK3-225ENST00000569063 FZD8Q9H461 694 aa22.47■■□□□ 1.19
CLK3-225ENST00000569063 NRDE2Q9H7Z3 1164 aa22.47■■□□□ 1.19
CLK3-225ENST00000569063 KANSL3Q9P2N6 904 aa22.47■■□□□ 1.19
CLK3-225ENST00000569063 DNM3Q9UQ16 869 aa22.47■■□□□ 1.19
CLK3-225ENST00000569063 INPP5FQ9Y2H2 1132 aa22.47■■□□□ 1.19
CLK3-225ENST00000569063 IPPQ9Y573 584 aa22.47■■□□□ 1.19
CLK3-225ENST00000569063 A0A1B0GUA9 196 aa22.46■■□□□ 1.19
CLK3-225ENST00000569063 B4GALT5O43286 388 aa22.46■■□□□ 1.19
CLK3-225ENST00000569063 EYA4O95677 639 aa22.46■■□□□ 1.19
CLK3-225ENST00000569063 PDCP20941 246 aa22.46■■□□□ 1.19
CLK3-225ENST00000569063 NRIP1P48552 1158 aa22.46■■□□□ 1.19
CLK3-225ENST00000569063 DLX2Q07687 328 aaPredicted RBP22.46■■□□□ 1.19
CLK3-225ENST00000569063 FAM187BQ17R55 369 aa22.46■■□□□ 1.19
CLK3-225ENST00000569063 ZBTB8OSQ8IWT0 167 aa22.46■■□□□ 1.19
CLK3-225ENST00000569063 URGCPQ8TCY9 931 aa22.46■■□□□ 1.19
CLK3-225ENST00000569063 BSNDQ8WZ55 320 aa22.46■■□□□ 1.19
CLK3-225ENST00000569063 TLE6Q9H808 572 aa22.46■■□□□ 1.19
CLK3-225ENST00000569063 NGRNQ9NPE2 291 aaKnown RBP22.46■■□□□ 1.19
CLK3-225ENST00000569063 PRMT7Q9NVM4 692 aaPredicted RBP22.46■■□□□ 1.19
CLK3-225ENST00000569063 MYO7AQ13402 2215 aa22.46■■□□□ 1.19
CLK3-225ENST00000569063 CUL9Q8IWT3 2517 aa22.45■■□□□ 1.18
CLK3-225ENST00000569063 E9PMD0 336 aa22.45■■□□□ 1.18
CLK3-225ENST00000569063 LINC01565O15544 149 aa22.45■■□□□ 1.18
CLK3-225ENST00000569063 ZC3H11AO75152 810 aaKnown RBP eCLIP22.45■■□□□ 1.18
CLK3-225ENST00000569063 ITGA4P13612 1032 aa22.45■■□□□ 1.18
CLK3-225ENST00000569063 NAMPTP43490 491 aa22.45■■□□□ 1.18
CLK3-225ENST00000569063 RNASELQ05823 741 aaKnown RBP22.45■■□□□ 1.18
CLK3-225ENST00000569063 PPP2R5AQ15172 486 aa22.45■■□□□ 1.18
CLK3-225ENST00000569063 HYIQ5T013 277 aa22.45■■□□□ 1.18
CLK3-225ENST00000569063 SLC27A1Q6PCB7 646 aa22.45■■□□□ 1.18
CLK3-225ENST00000569063 RBM23Q86U06 439 aaKnown RBP22.45■■□□□ 1.18
CLK3-225ENST00000569063 KCTD17Q8N5Z5 321 aa22.45■■□□□ 1.18
CLK3-225ENST00000569063 KIFAP3Q92845 792 aa22.45■■□□□ 1.18
CLK3-225ENST00000569063 INTS4Q96HW7 963 aaKnown RBP22.45■■□□□ 1.18
CLK3-225ENST00000569063 CDCA3Q99618 268 aaPredicted RBP22.45■■□□□ 1.18
CLK3-225ENST00000569063 TCF25Q9BQ70 676 aa22.45■■□□□ 1.18
CLK3-225ENST00000569063 FSD2A1L4K1 749 aa22.44■■□□□ 1.18
CLK3-225ENST00000569063 VWA3AA6NCI4 1184 aa22.44■■□□□ 1.18
CLK3-225ENST00000569063 NT5C1B-RDH14C9J2C7 533 aa22.44■■□□□ 1.18
CLK3-225ENST00000569063 INPPL1O15357 1258 aa22.44■■□□□ 1.18
CLK3-225ENST00000569063 TBX10O75333 385 aa22.44■■□□□ 1.18
CLK3-225ENST00000569063 GALTP07902 379 aa22.44■■□□□ 1.18
CLK3-225ENST00000569063 AFF1P51825 1210 aaKnown RBP22.44■■□□□ 1.18
CLK3-225ENST00000569063 DUSP6Q16828 381 aa22.44■■□□□ 1.18
CLK3-225ENST00000569063 ZNF280BQ86YH2 543 aa22.44■■□□□ 1.18
CLK3-225ENST00000569063 RNF39Q9H2S5 420 aa22.44■■□□□ 1.18
CLK3-225ENST00000569063 BRWD1Q9NSI6 2320 aa22.43■■□□□ 1.18
CLK3-225ENST00000569063 IL9P15248 144 aa22.43■■□□□ 1.18
CLK3-225ENST00000569063 MAPK6Q16659 721 aa22.43■■□□□ 1.18
CLK3-225ENST00000569063 PLPP4Q5VZY2 271 aa22.43■■□□□ 1.18
CLK3-225ENST00000569063 KCNK18Q7Z418 384 aa22.43■■□□□ 1.18
CLK3-225ENST00000569063 HACE1Q8IYU2 909 aa22.43■■□□□ 1.18
CLK3-225ENST00000569063 DEPTORQ8TB45 409 aa22.43■■□□□ 1.18
CLK3-225ENST00000569063 TMEM169Q96HH4 297 aa22.43■■□□□ 1.18
CLK3-225ENST00000569063 IGSF21Q96ID5 467 aa22.43■■□□□ 1.18
CLK3-225ENST00000569063 IFT74Q96LB3 600 aa22.43■■□□□ 1.18
CLK3-225ENST00000569063 TRIM6Q9C030 488 aaPredicted RBP22.43■■□□□ 1.18
CLK3-225ENST00000569063 CCDC113Q9H0I3 377 aa22.43■■□□□ 1.18
CLK3-225ENST00000569063 ENTPD7Q9NQZ7 604 aa22.43■■□□□ 1.18
CLK3-225ENST00000569063 DNAJB4Q9UDY4 337 aa22.43■■□□□ 1.18
CLK3-225ENST00000569063 FAM50BQ9Y247 325 aa22.43■■□□□ 1.18
CLK3-225ENST00000569063 HES2Q9Y543 173 aa22.43■■□□□ 1.18
CLK3-225ENST00000569063 ARL5CA6NH57 179 aa22.42■■□□□ 1.18
CLK3-225ENST00000569063 PER2O15055 1255 aa22.42■■□□□ 1.18
CLK3-225ENST00000569063 B4GALT3O60512 393 aa22.42■■□□□ 1.18
CLK3-225ENST00000569063 DDHD2O94830 711 aa22.42■■□□□ 1.18
CLK3-225ENST00000569063 GLP2RO95838 553 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms