RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 KCNG4Q8TDN1 519 aa14.36□□□□□ -0.11
CNOT1-213ENST00000568158 LEO1Q8WVC0 666 aaPredicted RBP14.36□□□□□ -0.11
CNOT1-213ENST00000568158 CASD1Q96PB1 797 aa14.36□□□□□ -0.11
CNOT1-213ENST00000568158 TIPINQ9BVW5 301 aa14.36□□□□□ -0.11
CNOT1-213ENST00000568158 TRAIPQ9BWF2 469 aa14.36□□□□□ -0.11
CNOT1-213ENST00000568158 EIF2AQ9BY44 585 aaKnown RBP14.36□□□□□ -0.11
CNOT1-213ENST00000568158 C2orf40Q9H1Z8 148 aa14.36□□□□□ -0.11
CNOT1-213ENST00000568158 PRMT7Q9NVM4 692 aaPredicted RBP14.36□□□□□ -0.11
CNOT1-213ENST00000568158 PCDHB2Q9Y5E7 798 aa14.36□□□□□ -0.11
CNOT1-213ENST00000568158 FNDC1Q4ZHG4 1894 aaPredicted RBP14.35□□□□□ -0.11
CNOT1-213ENST00000568158 CHD9Q3L8U1 2897 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 K7ERI5 159 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 SLC16A4O15374 487 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 ZNF623O75123 536 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 PRKCBP05771 671 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 KRT18P05783 430 aaKnown RBP14.35□□□□□ -0.11
CNOT1-213ENST00000568158 LINC00271P0C7V0 271 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 SKIP12755 728 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 PLS3P13797 630 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 KRT85P78386 507 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 NUCB2P80303 420 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 PCBP1Q15365 356 aaKnown RBP eCLIP14.35□□□□□ -0.11
CNOT1-213ENST00000568158 FAM187BQ17R55 369 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 TPRNQ4KMQ1 711 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 EPC2Q52LR7 807 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 CLLU1OSQ5K130 101 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 NT5DC1Q5TFE4 455 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 CCDC73Q6ZRK6 1079 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 LRRC55Q6ZSA7 311 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 SV2BQ7L1I2 683 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 DYMQ7RTS9 669 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 MRPL10Q7Z7H8 261 aaKnown RBP14.35□□□□□ -0.11
CNOT1-213ENST00000568158 CMTR2Q8IYT2 770 aaKnown RBP14.35□□□□□ -0.11
CNOT1-213ENST00000568158 SMG8Q8ND04 991 aaKnown RBP14.35□□□□□ -0.11
CNOT1-213ENST00000568158 HELQQ8TDG4 1101 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 STAMQ92783 540 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 SPATA32Q96LK8 384 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 DRC1Q96MC2 740 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 REEP2Q9BRK0 252 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 NTPCRQ9BSD7 190 aaKnown RBP14.35□□□□□ -0.11
CNOT1-213ENST00000568158 CCDC113Q9H0I3 377 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 KMT5AQ9NQR1 393 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 TYW1Q9NV66 732 aaKnown RBP14.35□□□□□ -0.11
CNOT1-213ENST00000568158 KCND2Q9NZV8 630 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 HCSTQ9UBK5 93 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 STK17AQ9UEE5 414 aa14.35□□□□□ -0.11
CNOT1-213ENST00000568158 MRPL42Q9Y6G3 142 aaKnown RBP14.35□□□□□ -0.11
CNOT1-213ENST00000568158 COL4A6Q14031 1691 aa14.34□□□□□ -0.11
CNOT1-213ENST00000568158 A0A1B0GUA9 196 aa14.34□□□□□ -0.11
CNOT1-213ENST00000568158 MYMKA6NI61 221 aa14.34□□□□□ -0.11
CNOT1-213ENST00000568158 ACKR2O00590 384 aa14.34□□□□□ -0.11
CNOT1-213ENST00000568158 IGFBP4P22692 258 aa14.34□□□□□ -0.11
CNOT1-213ENST00000568158 BMPR1AP36894 532 aa14.34□□□□□ -0.11
CNOT1-213ENST00000568158 STAT6P42226 847 aa14.34□□□□□ -0.11
CNOT1-213ENST00000568158 DMP1Q13316 513 aaPredicted RBP14.34□□□□□ -0.11
CNOT1-213ENST00000568158 PRPF4BQ13523 1007 aaKnown RBP14.34□□□□□ -0.11
CNOT1-213ENST00000568158 MAPK6Q16659 721 aa14.34□□□□□ -0.11
CNOT1-213ENST00000568158 EEF1DP3Q658K8 133 aa14.34□□□□□ -0.11
CNOT1-213ENST00000568158 NOTUMQ6P988 496 aa14.34□□□□□ -0.11
CNOT1-213ENST00000568158 AGMOQ6ZNB7 445 aa14.34□□□□□ -0.11
CNOT1-213ENST00000568158 TAS1R3Q7RTX0 852 aa14.34□□□□□ -0.11
CNOT1-213ENST00000568158 MYCT1Q8N699 235 aa14.34□□□□□ -0.11
CNOT1-213ENST00000568158 FBXO22Q8NEZ5 403 aa14.34□□□□□ -0.11
CNOT1-213ENST00000568158 DHX58Q96C10 678 aa14.34□□□□□ -0.11
CNOT1-213ENST00000568158 GAS2L1Q99501 681 aaPredicted RBP14.34□□□□□ -0.11
CNOT1-213ENST00000568158 TMEM117Q9H0C3 514 aa14.34□□□□□ -0.11
CNOT1-213ENST00000568158 ZHX3Q9H4I2 956 aa14.34□□□□□ -0.11
CNOT1-213ENST00000568158 TMEM134Q9H6X4 195 aa14.34□□□□□ -0.11
CNOT1-213ENST00000568158 CWH43Q9H720 699 aa14.34□□□□□ -0.11
CNOT1-213ENST00000568158 C17orf75Q9HAS0 396 aa14.34□□□□□ -0.11
CNOT1-213ENST00000568158 GDPD2Q9HCC8 539 aa14.34□□□□□ -0.11
CNOT1-213ENST00000568158 HES2Q9Y543 173 aa14.34□□□□□ -0.11
CNOT1-213ENST00000568158 ATP6V1DQ9Y5K8 247 aa14.34□□□□□ -0.11
CNOT1-213ENST00000568158 LPXNO60711 386 aa14.33□□□□□ -0.12
CNOT1-213ENST00000568158 OFD1O75665 1012 aa14.33□□□□□ -0.12
CNOT1-213ENST00000568158 FAM13AO94988 1023 aa14.33□□□□□ -0.12
CNOT1-213ENST00000568158 NPTXRO95502 500 aa14.33□□□□□ -0.12
CNOT1-213ENST00000568158 FOSL2P15408 326 aa14.33□□□□□ -0.12
CNOT1-213ENST00000568158 AFF1P51825 1210 aaKnown RBP14.33□□□□□ -0.12
CNOT1-213ENST00000568158 EFNA5P52803 228 aa14.33□□□□□ -0.12
CNOT1-213ENST00000568158 E2F4Q16254 413 aa14.33□□□□□ -0.12
CNOT1-213ENST00000568158 TMEM132AQ24JP5 1023 aa14.33□□□□□ -0.12
CNOT1-213ENST00000568158 SPOUT1Q5T280 376 aaKnown RBP14.33□□□□□ -0.12
CNOT1-213ENST00000568158 RESP18Q5W5W9 173 aa14.33□□□□□ -0.12
CNOT1-213ENST00000568158 GDPD5Q8WTR4 605 aa14.33□□□□□ -0.12
CNOT1-213ENST00000568158 SPIRE2Q8WWL2 714 aa14.33□□□□□ -0.12
CNOT1-213ENST00000568158 DDX12PQ92771 950 aa14.33□□□□□ -0.12
CNOT1-213ENST00000568158 CLP1Q92989 425 aaKnown RBP14.33□□□□□ -0.12
CNOT1-213ENST00000568158 PGBD4Q96DM1 585 aa14.33□□□□□ -0.12
CNOT1-213ENST00000568158 PRIMPOLQ96LW4 560 aa14.33□□□□□ -0.12
CNOT1-213ENST00000568158 APOL6Q9BWW8 343 aa14.33□□□□□ -0.12
CNOT1-213ENST00000568158 ARHGAP28Q9P2N2 729 aa14.33□□□□□ -0.12
CNOT1-213ENST00000568158 ODF2LQ9ULJ1 636 aa14.33□□□□□ -0.12
CNOT1-213ENST00000568158 STXBP5LQ9Y2K9 1186 aa14.33□□□□□ -0.12
CNOT1-213ENST00000568158 RBM19Q9Y4C8 960 aaKnown RBP14.33□□□□□ -0.12
CNOT1-213ENST00000568158 IPPQ9Y573 584 aa14.33□□□□□ -0.12
CNOT1-213ENST00000568158 NLRC5Q86WI3 1866 aa14.32□□□□□ -0.12
CNOT1-213ENST00000568158 POLR2DO15514 142 aaKnown RBP14.32□□□□□ -0.12
CNOT1-213ENST00000568158 HOXA2O43364 376 aa14.32□□□□□ -0.12
CNOT1-213ENST00000568158 SLC34A2O95436 690 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms