RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 GCDHQ92947 438 aaPredicted RBP5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 WWC2-AS2Q96NR7 200 aa5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 SLC2A13Q96QE2 648 aa5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 PUF60Q9UHX1 559 aaKnown RBP5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 GPR45Q9Y5Y3 372 aa5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 ZNF536O15090 1300 aa5.29□□□□□ -1.56
HERPUD1-212ENST00000567944 NPEPPSL1A6NEC2 478 aa5.29□□□□□ -1.56
HERPUD1-212ENST00000567944 MTSS1O43312 755 aa5.29□□□□□ -1.56
HERPUD1-212ENST00000567944 NRP2O60462 931 aa5.29□□□□□ -1.56
HERPUD1-212ENST00000567944 FOXD2O60548 495 aaPredicted RBP5.29□□□□□ -1.56
HERPUD1-212ENST00000567944 CFBP00751 764 aa5.29□□□□□ -1.56
HERPUD1-212ENST00000567944 VSIG10L2P0DP72 767 aa5.29□□□□□ -1.56
HERPUD1-212ENST00000567944 MYBL2P10244 700 aa5.29□□□□□ -1.56
HERPUD1-212ENST00000567944 CTSSP25774 331 aa5.29□□□□□ -1.56
HERPUD1-212ENST00000567944 CCT2P78371 535 aaKnown RBP5.29□□□□□ -1.56
HERPUD1-212ENST00000567944 PPP3CAQ08209 521 aa5.29□□□□□ -1.56
HERPUD1-212ENST00000567944 ODF1Q14990 250 aa5.29□□□□□ -1.56
HERPUD1-212ENST00000567944 GAGE13Q4V321 117 aa5.29□□□□□ -1.56
HERPUD1-212ENST00000567944 PGM2L1Q6PCE3 622 aa5.29□□□□□ -1.56
HERPUD1-212ENST00000567944 GLB1L2Q8IW92 636 aa5.29□□□□□ -1.56
HERPUD1-212ENST00000567944 RPL10LQ96L21 214 aaKnown RBP5.29□□□□□ -1.56
HERPUD1-212ENST00000567944 BDH2Q9BUT1 245 aa5.29□□□□□ -1.56
HERPUD1-212ENST00000567944 PLA2G12BQ9BX93 195 aa5.29□□□□□ -1.56
HERPUD1-212ENST00000567944 ENKD1Q9H0I2 346 aa5.29□□□□□ -1.56
HERPUD1-212ENST00000567944 C14orf93Q9H972 538 aaKnown RBP5.29□□□□□ -1.56
HERPUD1-212ENST00000567944 CD248Q9HCU0 757 aa5.29□□□□□ -1.56
HERPUD1-212ENST00000567944 TUBD1Q9UJT1 453 aa5.29□□□□□ -1.56
HERPUD1-212ENST00000567944 SHTN1A0MZ66 631 aa5.28□□□□□ -1.56
HERPUD1-212ENST00000567944 PATE3B3GLJ2 98 aa5.28□□□□□ -1.56
HERPUD1-212ENST00000567944 DAPK3O43293 454 aa5.28□□□□□ -1.56
HERPUD1-212ENST00000567944 CDC14BO60729 498 aa5.28□□□□□ -1.56
HERPUD1-212ENST00000567944 ALDH1A2O94788 518 aa5.28□□□□□ -1.56
HERPUD1-212ENST00000567944 LTA4HP09960 611 aaKnown RBP5.28□□□□□ -1.56
HERPUD1-212ENST00000567944 MTHFD2P13995 350 aa5.28□□□□□ -1.56
HERPUD1-212ENST00000567944 XPAP23025 273 aaPredicted RBP5.28□□□□□ -1.56
HERPUD1-212ENST00000567944 KRT85P78386 507 aa5.28□□□□□ -1.56
HERPUD1-212ENST00000567944 RIN1Q13671 783 aa5.28□□□□□ -1.56
HERPUD1-212ENST00000567944 ICAM4Q14773 271 aa5.28□□□□□ -1.56
HERPUD1-212ENST00000567944 ZNF568Q3ZCX4 644 aa5.28□□□□□ -1.56
HERPUD1-212ENST00000567944 LMBR1LQ6UX01 489 aa5.28□□□□□ -1.56
HERPUD1-212ENST00000567944 BTNL9Q6UXG8 535 aa5.28□□□□□ -1.56
HERPUD1-212ENST00000567944 GLB1L3Q8NCI6 653 aaPredicted RBP5.28□□□□□ -1.56
HERPUD1-212ENST00000567944 HOXB13Q92826 284 aaPredicted RBP5.28□□□□□ -1.56
HERPUD1-212ENST00000567944 RELTQ969Z4 430 aa5.28□□□□□ -1.56
HERPUD1-212ENST00000567944 UIMC1Q96RL1 719 aa5.28□□□□□ -1.56
HERPUD1-212ENST00000567944 SMAD5Q99717 465 aaKnown RBP5.28□□□□□ -1.56
HERPUD1-212ENST00000567944 SLC13A1Q9BZW2 595 aa5.28□□□□□ -1.56
HERPUD1-212ENST00000567944 DMRT3Q9NQL9 472 aa5.28□□□□□ -1.56
HERPUD1-212ENST00000567944 WNT10BO00744 389 aa5.27□□□□□ -1.57
HERPUD1-212ENST00000567944 JUNP05412 331 aaKnown RBP5.27□□□□□ -1.57
HERPUD1-212ENST00000567944 C5AR1P21730 350 aa5.27□□□□□ -1.57
HERPUD1-212ENST00000567944 NRG3P56975 720 aa5.27□□□□□ -1.57
HERPUD1-212ENST00000567944 ANO4Q32M45 955 aa5.27□□□□□ -1.57
HERPUD1-212ENST00000567944 C19orf54Q5BKX5 351 aa5.27□□□□□ -1.57
HERPUD1-212ENST00000567944 MBNL2Q5VZF2 373 aaKnown RBP5.27□□□□□ -1.57
HERPUD1-212ENST00000567944 Q6ZSN1 163 aa5.27□□□□□ -1.57
HERPUD1-212ENST00000567944 Q6ZVL8 140 aa5.27□□□□□ -1.57
HERPUD1-212ENST00000567944 CIR1Q86X95 450 aaPredicted RBP5.27□□□□□ -1.57
HERPUD1-212ENST00000567944 FUKQ8N0W3 1084 aa5.27□□□□□ -1.57
HERPUD1-212ENST00000567944 SHCBP1Q8NEM2 672 aa5.27□□□□□ -1.57
HERPUD1-212ENST00000567944 Q8TCH9 128 aa5.27□□□□□ -1.57
HERPUD1-212ENST00000567944 SNX33Q8WV41 574 aa5.27□□□□□ -1.57
HERPUD1-212ENST00000567944 KRTAP3-1Q9BYR8 98 aa5.27□□□□□ -1.57
HERPUD1-212ENST00000567944 C12orf65Q9H3J6 166 aaKnown RBP5.27□□□□□ -1.57
HERPUD1-212ENST00000567944 MKS1Q9NXB0 559 aa5.27□□□□□ -1.57
HERPUD1-212ENST00000567944 THRAP3Q9Y2W1 955 aaKnown RBP5.27□□□□□ -1.57
HERPUD1-212ENST00000567944 UBE2QL1A1L167 161 aa5.26□□□□□ -1.57
HERPUD1-212ENST00000567944 RAD17O75943 681 aa5.26□□□□□ -1.57
HERPUD1-212ENST00000567944 ZRANB2O95218 330 aaKnown RBP eCLIP5.26□□□□□ -1.57
HERPUD1-212ENST00000567944 MCAMP43121 646 aa5.26□□□□□ -1.57
HERPUD1-212ENST00000567944 MEF2AQ02078 507 aaPredicted RBP5.26□□□□□ -1.57
HERPUD1-212ENST00000567944 FOXL1Q12952 345 aa5.26□□□□□ -1.57
HERPUD1-212ENST00000567944 MALLQ13021 153 aa5.26□□□□□ -1.57
HERPUD1-212ENST00000567944 PTPN21Q16825 1174 aa5.26□□□□□ -1.57
HERPUD1-212ENST00000567944 GLB1LQ6UWU2 654 aa5.26□□□□□ -1.57
HERPUD1-212ENST00000567944 AMOTL1Q8IY63 956 aa5.26□□□□□ -1.57
HERPUD1-212ENST00000567944 OR2I1PQ8NGU4 316 aa5.26□□□□□ -1.57
HERPUD1-212ENST00000567944 RIN2Q8WYP3 895 aaPredicted RBP5.26□□□□□ -1.57
HERPUD1-212ENST00000567944 FATE1Q969F0 183 aa5.26□□□□□ -1.57
HERPUD1-212ENST00000567944 ACE2Q9BYF1 805 aaPredicted RBP5.26□□□□□ -1.57
HERPUD1-212ENST00000567944 MSL2Q9HCI7 577 aa5.26□□□□□ -1.57
HERPUD1-212ENST00000567944 IL23AQ9NPF7 189 aa5.26□□□□□ -1.57
HERPUD1-212ENST00000567944 TLR9Q9NR96 1032 aa5.26□□□□□ -1.57
HERPUD1-212ENST00000567944 HECAQ9UBI9 543 aaPredicted RBP5.26□□□□□ -1.57
HERPUD1-212ENST00000567944 ZFR2Q9UPR6 939 aaKnown RBP5.26□□□□□ -1.57
HERPUD1-212ENST00000567944 SLC30A1Q9Y6M5 507 aa5.26□□□□□ -1.57
HERPUD1-212ENST00000567944 KLHL33A6NCF5 533 aa5.25□□□□□ -1.57
HERPUD1-212ENST00000567944 ALDH1L1O75891 902 aa5.25□□□□□ -1.57
HERPUD1-212ENST00000567944 STC2O76061 302 aa5.25□□□□□ -1.57
HERPUD1-212ENST00000567944 CASRP41180 1078 aa5.25□□□□□ -1.57
HERPUD1-212ENST00000567944 SLC5A3P53794 718 aa5.25□□□□□ -1.57
HERPUD1-212ENST00000567944 MCL1Q07820 350 aa5.25□□□□□ -1.57
HERPUD1-212ENST00000567944 SEPT2Q15019 361 aa5.25□□□□□ -1.57
HERPUD1-212ENST00000567944 CLUL1Q15846 466 aa5.25□□□□□ -1.57
HERPUD1-212ENST00000567944 MST1LQ2TV78 715 aa5.25□□□□□ -1.57
HERPUD1-212ENST00000567944 PLEKHG6Q3KR16 790 aa5.25□□□□□ -1.57
HERPUD1-212ENST00000567944 RAVER1Q8IY67 606 aaKnown RBP5.25□□□□□ -1.57
HERPUD1-212ENST00000567944 CMTM4Q8IZR5 234 aa5.25□□□□□ -1.57
HERPUD1-212ENST00000567944 GIMAP8Q8ND71 665 aaPredicted RBP5.25□□□□□ -1.57
HERPUD1-212ENST00000567944 GPR156Q8NFN8 814 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms