RNA–Protein interactions for RNA: ENST00000567705.5

INO80E-210, Transcript of INO80 complex subunit E, human

TSL 3 BASIC

Gene INO80E, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
INO80E-210	ENST00000567705	SKI	P12755	728 aa		18.3	■□□□□ 0.52
INO80E-210	ENST00000567705	IGFBP4	P22692	258 aa		18.3	■□□□□ 0.52
INO80E-210	ENST00000567705	RAB27A	P51159	221 aa		18.3	■□□□□ 0.52
INO80E-210	ENST00000567705	MCM6	Q14566	821 aa		18.3	■□□□□ 0.52
INO80E-210	ENST00000567705	EPC2	Q52LR7	807 aa		18.3	■□□□□ 0.52
INO80E-210	ENST00000567705	AGMO	Q6ZNB7	445 aa		18.3	■□□□□ 0.52
INO80E-210	ENST00000567705	LRRC55	Q6ZSA7	311 aa		18.3	■□□□□ 0.52
INO80E-210	ENST00000567705	FIBCD1	Q8N539	461 aa		18.3	■□□□□ 0.52
INO80E-210	ENST00000567705	RSPH1	Q8WYR4	309 aa		18.3	■□□□□ 0.52
INO80E-210	ENST00000567705	CHAMP1	Q96JM3	812 aa		18.3	■□□□□ 0.52
INO80E-210	ENST00000567705	KIFC3	Q9BVG8	833 aa		18.3	■□□□□ 0.52
INO80E-210	ENST00000567705	TMEM117	Q9H0C3	514 aa		18.3	■□□□□ 0.52
INO80E-210	ENST00000567705	TMEM134	Q9H6X4	195 aa		18.3	■□□□□ 0.52
INO80E-210	ENST00000567705	CWH43	Q9H720	699 aa		18.3	■□□□□ 0.52
INO80E-210	ENST00000567705	CERS4	Q9HA82	394 aa		18.3	■□□□□ 0.52
INO80E-210	ENST00000567705	CFAP45	Q9UL16	551 aa		18.3	■□□□□ 0.52
INO80E-210	ENST00000567705	ODF2L	Q9ULJ1	636 aa		18.3	■□□□□ 0.52
INO80E-210	ENST00000567705	PCDHA7	Q9UN72	937 aa		18.3	■□□□□ 0.52
INO80E-210	ENST00000567705	COL4A4	P53420	1690 aa	Predicted RBP	18.3	■□□□□ 0.52
INO80E-210	ENST00000567705	NPHP3-ACAD11	A0A0J9YXS1	232 aa		18.29	■□□□□ 0.52
INO80E-210	ENST00000567705	RFXAP	O00287	272 aa		18.29	■□□□□ 0.52
INO80E-210	ENST00000567705	PLS3	P13797	630 aa		18.29	■□□□□ 0.52
INO80E-210	ENST00000567705	BMPR1A	P36894	532 aa		18.29	■□□□□ 0.52
INO80E-210	ENST00000567705	EFNA5	P52803	228 aa		18.29	■□□□□ 0.52
INO80E-210	ENST00000567705	GIT2	Q14161	759 aa		18.29	■□□□□ 0.52
INO80E-210	ENST00000567705	BTG3	Q14201	252 aa	Predicted RBP	18.29	■□□□□ 0.52
INO80E-210	ENST00000567705	TWF2	Q6IBS0	349 aa	Known RBP	18.29	■□□□□ 0.52
INO80E-210	ENST00000567705	NOTUM	Q6P988	496 aa		18.29	■□□□□ 0.52
INO80E-210	ENST00000567705	TMEM192	Q8IY95	271 aa		18.29	■□□□□ 0.52
INO80E-210	ENST00000567705	ARNTL2	Q8WYA1	636 aa		18.29	■□□□□ 0.52
INO80E-210	ENST00000567705	CPB2	Q96IY4	423 aa		18.29	■□□□□ 0.52
INO80E-210	ENST00000567705	REEP2	Q9BRK0	252 aa		18.29	■□□□□ 0.52
INO80E-210	ENST00000567705	EIF2A	Q9BY44	585 aa	Known RBP	18.29	■□□□□ 0.52
INO80E-210	ENST00000567705	LRFN2	Q9ULH4	789 aa		18.29	■□□□□ 0.52
INO80E-210	ENST00000567705	PCDHB2	Q9Y5E7	798 aa		18.29	■□□□□ 0.52
INO80E-210	ENST00000567705	KIAA1671	Q9BY89	1806 aa		18.28	■□□□□ 0.52
INO80E-210	ENST00000567705	SFI1	A8K8P3	1242 aa		18.28	■□□□□ 0.52
INO80E-210	ENST00000567705		H3BNC9	293 aa		18.28	■□□□□ 0.52
INO80E-210	ENST00000567705	HOXA2	O43364	376 aa		18.28	■□□□□ 0.52
INO80E-210	ENST00000567705	ERLIN2	O94905	339 aa		18.28	■□□□□ 0.52
INO80E-210	ENST00000567705	RB1	P06400	928 aa		18.28	■□□□□ 0.52
INO80E-210	ENST00000567705	NCL	P19338	710 aa	Known RBP	18.28	■□□□□ 0.52
INO80E-210	ENST00000567705	PEX3	P56589	373 aa		18.28	■□□□□ 0.52
INO80E-210	ENST00000567705	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	18.28	■□□□□ 0.52
INO80E-210	ENST00000567705	NT5DC1	Q5TFE4	455 aa		18.28	■□□□□ 0.52
INO80E-210	ENST00000567705	FOXD4L3	Q6VB84	417 aa	Predicted RBP	18.28	■□□□□ 0.52
INO80E-210	ENST00000567705	ZBTB8OS	Q8IWT0	167 aa		18.28	■□□□□ 0.52
INO80E-210	ENST00000567705	TMEM161B	Q8NDZ6	487 aa		18.28	■□□□□ 0.52
INO80E-210	ENST00000567705	IFT74	Q96LB3	600 aa		18.28	■□□□□ 0.52
INO80E-210	ENST00000567705	PLVAP	Q9BX97	442 aa		18.28	■□□□□ 0.52
INO80E-210	ENST00000567705	PTPRH	Q9HD43	1115 aa		18.28	■□□□□ 0.52
INO80E-210	ENST00000567705	LMCD1	Q9NZU5	365 aa		18.28	■□□□□ 0.52
INO80E-210	ENST00000567705	HCST	Q9UBK5	93 aa		18.28	■□□□□ 0.52
INO80E-210	ENST00000567705	DAXX	Q9UER7	740 aa	Predicted RBP	18.28	■□□□□ 0.52
INO80E-210	ENST00000567705	CCDC39	Q9UFE4	941 aa		18.28	■□□□□ 0.52
INO80E-210	ENST00000567705	MTCH2	Q9Y6C9	303 aa		18.28	■□□□□ 0.52
INO80E-210	ENST00000567705	NLRC5	Q86WI3	1866 aa		18.28	■□□□□ 0.52
INO80E-210	ENST00000567705	PHLPP2	Q6ZVD8	1323 aa		18.27	■□□□□ 0.52
INO80E-210	ENST00000567705	MYO9B	Q13459	2157 aa		18.27	■□□□□ 0.52
INO80E-210	ENST00000567705	ABLIM1	O14639	778 aa		18.27	■□□□□ 0.52
INO80E-210	ENST00000567705	OFD1	O75665	1012 aa		18.27	■□□□□ 0.52
INO80E-210	ENST00000567705	PRKCB	P05771	671 aa		18.27	■□□□□ 0.52
INO80E-210	ENST00000567705	NCKAP1L	P55160	1127 aa		18.27	■□□□□ 0.52
INO80E-210	ENST00000567705	MAPK6	Q16659	721 aa		18.27	■□□□□ 0.52
INO80E-210	ENST00000567705	RRAGB	Q5VZM2	374 aa		18.27	■□□□□ 0.52
INO80E-210	ENST00000567705	RESP18	Q5W5W9	173 aa		18.27	■□□□□ 0.52
INO80E-210	ENST00000567705	SLC27A1	Q6PCB7	646 aa		18.27	■□□□□ 0.52
INO80E-210	ENST00000567705	CCDC73	Q6ZRK6	1079 aa		18.27	■□□□□ 0.52
INO80E-210	ENST00000567705	GPBP1	Q86WP2	473 aa		18.27	■□□□□ 0.52
INO80E-210	ENST00000567705	DEPTOR	Q8TB45	409 aa		18.27	■□□□□ 0.52
INO80E-210	ENST00000567705	LEO1	Q8WVC0	666 aa	Predicted RBP	18.27	■□□□□ 0.52
INO80E-210	ENST00000567705	PPM1E	Q8WY54	764 aa		18.27	■□□□□ 0.52
INO80E-210	ENST00000567705	LPP	Q93052	612 aa		18.27	■□□□□ 0.52
INO80E-210	ENST00000567705	P2RX5	Q93086	422 aa		18.27	■□□□□ 0.52
INO80E-210	ENST00000567705	DNAJC19	Q96DA6	116 aa		18.27	■□□□□ 0.52
INO80E-210	ENST00000567705	PDZD7	Q9H5P4	517 aa		18.27	■□□□□ 0.52
INO80E-210	ENST00000567705	RWDD3	Q9Y3V2	267 aa		18.27	■□□□□ 0.52
INO80E-210	ENST00000567705	RBM19	Q9Y4C8	960 aa	Known RBP	18.27	■□□□□ 0.52
INO80E-210	ENST00000567705	IPP	Q9Y573	584 aa		18.27	■□□□□ 0.52
INO80E-210	ENST00000567705	FRMD3	A2A2Y4	597 aa		18.26	■□□□□ 0.51
INO80E-210	ENST00000567705	MYMK	A6NI61	221 aa		18.26	■□□□□ 0.51
INO80E-210	ENST00000567705	TBKBP1	A7MCY6	615 aa		18.26	■□□□□ 0.51
INO80E-210	ENST00000567705	SSB	P05455	408 aa	Known RBP eCLIP	18.26	■□□□□ 0.51
INO80E-210	ENST00000567705	MAPT	P10636	758 aa	Known RBP	18.26	■□□□□ 0.51
INO80E-210	ENST00000567705	PROZ	P22891	400 aa		18.26	■□□□□ 0.51
INO80E-210	ENST00000567705	TXLNA	P40222	546 aa		18.26	■□□□□ 0.51
INO80E-210	ENST00000567705	AFF1	P51825	1210 aa	Known RBP	18.26	■□□□□ 0.51
INO80E-210	ENST00000567705	RAD51AP2	Q09MP3	1159 aa		18.26	■□□□□ 0.51
INO80E-210	ENST00000567705	DMP1	Q13316	513 aa	Predicted RBP	18.26	■□□□□ 0.51
INO80E-210	ENST00000567705	CAMK1	Q14012	370 aa		18.26	■□□□□ 0.51
INO80E-210	ENST00000567705	CNNM3	Q8NE01	707 aa		18.26	■□□□□ 0.51
INO80E-210	ENST00000567705	FBXO22	Q8NEZ5	403 aa		18.26	■□□□□ 0.51
INO80E-210	ENST00000567705	COL25A1	Q9BXS0	654 aa	Predicted RBP	18.26	■□□□□ 0.51
INO80E-210	ENST00000567705	RNF39	Q9H2S5	420 aa		18.26	■□□□□ 0.51
INO80E-210	ENST00000567705	TYW1	Q9NV66	732 aa	Known RBP	18.26	■□□□□ 0.51
INO80E-210	ENST00000567705	KBTBD4	Q9NVX7	518 aa		18.26	■□□□□ 0.51
INO80E-210	ENST00000567705	KCNG1	Q9UIX4	513 aa		18.26	■□□□□ 0.51
INO80E-210	ENST00000567705	USP20	Q9Y2K6	914 aa		18.26	■□□□□ 0.51
INO80E-210	ENST00000567705	ZMYM2	Q9UBW7	1377 aa		18.26	■□□□□ 0.51
INO80E-210	ENST00000567705	FAM237A	A0A1B0GTK4	181 aa		18.25	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms