RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 TMEM134Q9H6X4 195 aa13.71□□□□□ -0.21
RNF40-211ENST00000567365 FAM105AQ9NUU6 356 aa13.71□□□□□ -0.21
RNF40-211ENST00000567365 DACT1Q9NYF0 836 aa13.71□□□□□ -0.21
RNF40-211ENST00000567365 PIN4Q9Y237 131 aaKnown RBP13.71□□□□□ -0.21
RNF40-211ENST00000567365 PRUNE2Q8WUY3 3088 aa13.71□□□□□ -0.22
RNF40-211ENST00000567365 CNTNAP2Q9UHC6 1331 aa13.7□□□□□ -0.22
RNF40-211ENST00000567365 RALGAPA2Q2PPJ7 1873 aa13.7□□□□□ -0.22
RNF40-211ENST00000567365 KIAA1671Q9BY89 1806 aa13.7□□□□□ -0.22
RNF40-211ENST00000567365 ACKR2O00590 384 aa13.7□□□□□ -0.22
RNF40-211ENST00000567365 EOMESO95936 686 aa13.7□□□□□ -0.22
RNF40-211ENST00000567365 STAT6P42226 847 aa13.7□□□□□ -0.22
RNF40-211ENST00000567365 GATMP50440 423 aa13.7□□□□□ -0.22
RNF40-211ENST00000567365 EFNA5P52803 228 aa13.7□□□□□ -0.22
RNF40-211ENST00000567365 NCKAP1LP55160 1127 aa13.7□□□□□ -0.22
RNF40-211ENST00000567365 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
RNF40-211ENST00000567365 DHX8Q14562 1220 aaKnown RBP13.7□□□□□ -0.22
RNF40-211ENST00000567365 NT5DC1Q5TFE4 455 aa13.7□□□□□ -0.22
RNF40-211ENST00000567365 CNNM4Q6P4Q7 775 aa13.7□□□□□ -0.22
RNF40-211ENST00000567365 PDILTQ8N807 584 aa13.7□□□□□ -0.22
RNF40-211ENST00000567365 TMEM161BQ8NDZ6 487 aa13.7□□□□□ -0.22
RNF40-211ENST00000567365 RASSF8Q8NHQ8 419 aa13.7□□□□□ -0.22
RNF40-211ENST00000567365 IFT74Q96LB3 600 aa13.7□□□□□ -0.22
RNF40-211ENST00000567365 CUEDC2Q9H467 287 aa13.7□□□□□ -0.22
RNF40-211ENST00000567365 GDPD2Q9HCC8 539 aa13.7□□□□□ -0.22
RNF40-211ENST00000567365 PRMT7Q9NVM4 692 aaPredicted RBP13.7□□□□□ -0.22
RNF40-211ENST00000567365 RBM19Q9Y4C8 960 aaKnown RBP13.7□□□□□ -0.22
RNF40-211ENST00000567365 SPTBN5Q9NRC6 3674 aaKnown RBP13.7□□□□□ -0.22
RNF40-211ENST00000567365 NLRC5Q86WI3 1866 aa13.7□□□□□ -0.22
RNF40-211ENST00000567365 UNC80Q8N2C7 3258 aa13.69□□□□□ -0.22
RNF40-211ENST00000567365 A0A1W2PQ27 194 aa13.69□□□□□ -0.22
RNF40-211ENST00000567365 A0A1W2PQ64 194 aa13.69□□□□□ -0.22
RNF40-211ENST00000567365 A0A1W2PQD8 194 aa13.69□□□□□ -0.22
RNF40-211ENST00000567365 MEIS3P2A8K0S8 358 aa13.69□□□□□ -0.22
RNF40-211ENST00000567365 PRKCBP05771 671 aa13.69□□□□□ -0.22
RNF40-211ENST00000567365 STAG3L1P0CL83 205 aa13.69□□□□□ -0.22
RNF40-211ENST00000567365 MAPTP10636 758 aaKnown RBP13.69□□□□□ -0.22
RNF40-211ENST00000567365 RAB27AP51159 221 aa13.69□□□□□ -0.22
RNF40-211ENST00000567365 ERVK-21P61565 698 aa13.69□□□□□ -0.22
RNF40-211ENST00000567365 DMP1Q13316 513 aaPredicted RBP13.69□□□□□ -0.22
RNF40-211ENST00000567365 MAPK6Q16659 721 aa13.69□□□□□ -0.22
RNF40-211ENST00000567365 CLLU1OSQ5K130 101 aa13.69□□□□□ -0.22
RNF40-211ENST00000567365 ZNF697Q5TEC3 545 aa13.69□□□□□ -0.22
RNF40-211ENST00000567365 TWF2Q6IBS0 349 aaKnown RBP13.69□□□□□ -0.22
RNF40-211ENST00000567365 SV2BQ7L1I2 683 aa13.69□□□□□ -0.22
RNF40-211ENST00000567365 ZBTB8OSQ8IWT0 167 aa13.69□□□□□ -0.22
RNF40-211ENST00000567365 SMG8Q8ND04 991 aaKnown RBP13.69□□□□□ -0.22
RNF40-211ENST00000567365 DEPTORQ8TB45 409 aa13.69□□□□□ -0.22
RNF40-211ENST00000567365 DDX12PQ92771 950 aa13.69□□□□□ -0.22
RNF40-211ENST00000567365 CLP1Q92989 425 aaKnown RBP13.69□□□□□ -0.22
RNF40-211ENST00000567365 CPB2Q96IY4 423 aa13.69□□□□□ -0.22
RNF40-211ENST00000567365 ZBED2Q9BTP6 218 aa13.69□□□□□ -0.22
RNF40-211ENST00000567365 TNMDQ9H2S6 317 aa13.69□□□□□ -0.22
RNF40-211ENST00000567365 SLC28A3Q9HAS3 691 aa13.69□□□□□ -0.22
RNF40-211ENST00000567365 PARVGQ9HBI0 331 aa13.69□□□□□ -0.22
RNF40-211ENST00000567365 PCDHB7Q9Y5E2 793 aa13.69□□□□□ -0.22
RNF40-211ENST00000567365 PCDHB2Q9Y5E7 798 aa13.69□□□□□ -0.22
RNF40-211ENST00000567365 PHLPP2Q6ZVD8 1323 aa13.68□□□□□ -0.22
RNF40-211ENST00000567365 ABLIM1O14639 778 aa13.68□□□□□ -0.22
RNF40-211ENST00000567365 POLR2DO15514 142 aaKnown RBP13.68□□□□□ -0.22
RNF40-211ENST00000567365 ACTN4O43707 911 aaKnown RBP13.68□□□□□ -0.22
RNF40-211ENST00000567365 PPP1R37O75864 691 aa13.68□□□□□ -0.22
RNF40-211ENST00000567365 ERLIN2O94905 339 aa13.68□□□□□ -0.22
RNF40-211ENST00000567365 PFKFB1P16118 471 aa13.68□□□□□ -0.22
RNF40-211ENST00000567365 NCLP19338 710 aaKnown RBP13.68□□□□□ -0.22
RNF40-211ENST00000567365 GRIN2CQ14957 1233 aa13.68□□□□□ -0.22
RNF40-211ENST00000567365 EEF1DP3Q658K8 133 aa13.68□□□□□ -0.22
RNF40-211ENST00000567365 PPP2R2DQ66LE6 453 aa13.68□□□□□ -0.22
RNF40-211ENST00000567365 NOTUMQ6P988 496 aa13.68□□□□□ -0.22
RNF40-211ENST00000567365 AGMOQ6ZNB7 445 aa13.68□□□□□ -0.22
RNF40-211ENST00000567365 CMTR2Q8IYT2 770 aaKnown RBP13.68□□□□□ -0.22
RNF40-211ENST00000567365 IQUBQ8NA54 791 aa13.68□□□□□ -0.22
RNF40-211ENST00000567365 MYLIPQ8WY64 445 aa13.68□□□□□ -0.22
RNF40-211ENST00000567365 CASD1Q96PB1 797 aa13.68□□□□□ -0.22
RNF40-211ENST00000567365 YME1L1Q96TA2 773 aa13.68□□□□□ -0.22
RNF40-211ENST00000567365 STRA6Q9BX79 667 aa13.68□□□□□ -0.22
RNF40-211ENST00000567365 EIF2AQ9BY44 585 aaKnown RBP13.68□□□□□ -0.22
RNF40-211ENST00000567365 ST6GALNAC4Q9H4F1 302 aa13.68□□□□□ -0.22
RNF40-211ENST00000567365 PDZD7Q9H5P4 517 aa13.68□□□□□ -0.22
RNF40-211ENST00000567365 PTPRHQ9HD43 1115 aa13.68□□□□□ -0.22
RNF40-211ENST00000567365 KMT5AQ9NQR1 393 aa13.68□□□□□ -0.22
RNF40-211ENST00000567365 RNF216Q9NWF9 866 aaPredicted RBP13.68□□□□□ -0.22
RNF40-211ENST00000567365 CHMP5Q9NZZ3 219 aa13.68□□□□□ -0.22
RNF40-211ENST00000567365 LARSQ9P2J5 1176 aaKnown RBP13.68□□□□□ -0.22
RNF40-211ENST00000567365 KCNG1Q9UIX4 513 aa13.68□□□□□ -0.22
RNF40-211ENST00000567365 KCNH3Q9ULD8 1083 aa13.68□□□□□ -0.22
RNF40-211ENST00000567365 USP20Q9Y2K6 914 aa13.68□□□□□ -0.22
RNF40-211ENST00000567365 COL4A4P53420 1690 aaPredicted RBP13.67□□□□□ -0.22
RNF40-211ENST00000567365 A0A1B0GVL5 298 aa13.67□□□□□ -0.22
RNF40-211ENST00000567365 EPOPA6NHQ4 379 aa13.67□□□□□ -0.22
RNF40-211ENST00000567365 CCDC169A6NNP5 214 aa13.67□□□□□ -0.22
RNF40-211ENST00000567365 K7ERI5 159 aa13.67□□□□□ -0.22
RNF40-211ENST00000567365 INPPL1O15357 1258 aa13.67□□□□□ -0.22
RNF40-211ENST00000567365 SLC16A4O15374 487 aa13.67□□□□□ -0.22
RNF40-211ENST00000567365 FGFR1P11362 822 aa13.67□□□□□ -0.22
RNF40-211ENST00000567365 SKIP12755 728 aa13.67□□□□□ -0.22
RNF40-211ENST00000567365 PROZP22891 400 aa13.67□□□□□ -0.22
RNF40-211ENST00000567365 CDR2LQ86X02 465 aaPredicted RBP13.67□□□□□ -0.22
RNF40-211ENST00000567365 MAFAQ8NHW3 353 aaPredicted RBP13.67□□□□□ -0.22
RNF40-211ENST00000567365 DHX58Q96C10 678 aa13.67□□□□□ -0.22
RNF40-211ENST00000567365 ACO2Q99798 780 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms