RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 CBWD1Q9BRT8 395 aa25.28■■□□□ 1.64
LINC00543-201ENST00000567234 PEX10O60683 326 aa25.28■■□□□ 1.64
LINC00543-201ENST00000567234 VAMP7P51809 220 aa25.28■■□□□ 1.64
LINC00543-201ENST00000567234 CHMP4BP1P59074 171 aa25.28■■□□□ 1.64
LINC00543-201ENST00000567234 MYL7Q01449 175 aa25.28■■□□□ 1.64
LINC00543-201ENST00000567234 SP4Q02446 784 aa25.28■■□□□ 1.64
LINC00543-201ENST00000567234 VIPAS39Q9H9C1 493 aa25.28■■□□□ 1.64
LINC00543-201ENST00000567234 XPNPEP1Q9NQW7 623 aa25.28■■□□□ 1.64
LINC00543-201ENST00000567234 RBPJLQ9UBG7 517 aa25.28■■□□□ 1.64
LINC00543-201ENST00000567234 TELO2Q9Y4R8 837 aa25.28■■□□□ 1.64
LINC00543-201ENST00000567234 ATP8B3O60423 1300 aa25.27■■□□□ 1.64
LINC00543-201ENST00000567234 ZNFX1Q9P2E3 1918 aaKnown RBP25.27■■□□□ 1.64
LINC00543-201ENST00000567234 MACROD2A1Z1Q3 448 aa25.27■■□□□ 1.64
LINC00543-201ENST00000567234 CPP00450 1065 aa25.27■■□□□ 1.64
LINC00543-201ENST00000567234 FERP16591 822 aa25.27■■□□□ 1.64
LINC00543-201ENST00000567234 CBWD6Q4V339 395 aa25.27■■□□□ 1.64
LINC00543-201ENST00000567234 CBWD3Q5JTY5 395 aa25.27■■□□□ 1.64
LINC00543-201ENST00000567234 CBWD5Q5RIA9 395 aa25.27■■□□□ 1.64
LINC00543-201ENST00000567234 KCNV1Q6PIU1 500 aa25.27■■□□□ 1.64
LINC00543-201ENST00000567234 IFT74Q96LB3 600 aa25.27■■□□□ 1.64
LINC00543-201ENST00000567234 STK33Q9BYT3 514 aa25.27■■□□□ 1.64
LINC00543-201ENST00000567234 SAR1BQ9Y6B6 198 aa25.27■■□□□ 1.64
LINC00543-201ENST00000567234 LOC102724159A0A0B4J2E5 919 aa25.26■■□□□ 1.63
LINC00543-201ENST00000567234 DENND3A2RUS2 1198 aa25.26■■□□□ 1.63
LINC00543-201ENST00000567234 OATP04181 439 aa25.26■■□□□ 1.63
LINC00543-201ENST00000567234 UBA1P22314 1058 aaKnown RBP25.26■■□□□ 1.63
LINC00543-201ENST00000567234 CETN1Q12798 172 aa25.26■■□□□ 1.63
LINC00543-201ENST00000567234 PWP2Q15269 919 aaKnown RBP25.26■■□□□ 1.63
LINC00543-201ENST00000567234 IQCEQ6IPM2 695 aa25.26■■□□□ 1.63
LINC00543-201ENST00000567234 GPAT2Q6NUI2 795 aa25.26■■□□□ 1.63
LINC00543-201ENST00000567234 BSNDQ8WZ55 320 aa25.26■■□□□ 1.63
LINC00543-201ENST00000567234 VTI1AQ96AJ9 217 aa25.26■■□□□ 1.63
LINC00543-201ENST00000567234 NIFKQ9BYG3 293 aaKnown RBP25.26■■□□□ 1.63
LINC00543-201ENST00000567234 PCIF1Q9H4Z3 704 aa25.26■■□□□ 1.63
LINC00543-201ENST00000567234 JRKLQ9Y4A0 524 aa25.26■■□□□ 1.63
LINC00543-201ENST00000567234 GFPT2O94808 682 aa25.26■■□□□ 1.63
LINC00543-201ENST00000567234 FARP2O94887 1054 aaPredicted RBP25.26■■□□□ 1.63
LINC00543-201ENST00000567234 TRIM49P0CI25 452 aa25.26■■□□□ 1.63
LINC00543-201ENST00000567234 TRIM49CP0CI26 452 aa25.26■■□□□ 1.63
LINC00543-201ENST00000567234 STAT1P42224 750 aa25.26■■□□□ 1.63
LINC00543-201ENST00000567234 ARID5AQ03989 594 aa25.26■■□□□ 1.63
LINC00543-201ENST00000567234 ENPEPQ07075 957 aa25.26■■□□□ 1.63
LINC00543-201ENST00000567234 C10orf67Q8IYJ2 551 aa25.26■■□□□ 1.63
LINC00543-201ENST00000567234 RDH13Q8NBN7 331 aa25.26■■□□□ 1.63
LINC00543-201ENST00000567234 GTF3C2Q8WUA4 911 aaPredicted RBP25.26■■□□□ 1.63
LINC00543-201ENST00000567234 ALS2CR12Q96Q35 445 aa25.26■■□□□ 1.63
LINC00543-201ENST00000567234 INTS2Q9H0H0 1204 aaKnown RBP25.26■■□□□ 1.63
LINC00543-201ENST00000567234 MROH8Q9H579 483 aa25.26■■□□□ 1.63
LINC00543-201ENST00000567234 ZCCHC17Q9NP64 241 aaKnown RBP25.26■■□□□ 1.63
LINC00543-201ENST00000567234 L1RE1Q9UN81 338 aa25.26■■□□□ 1.63
LINC00543-201ENST00000567234 DNAJC25-GNG10A0A024R161 153 aa25.25■■□□□ 1.63
LINC00543-201ENST00000567234 TISP43B9A030 160 aa25.25■■□□□ 1.63
LINC00543-201ENST00000567234 ATP1A1P05023 1023 aaKnown RBP25.25■■□□□ 1.63
LINC00543-201ENST00000567234 ATP4AP20648 1035 aa25.25■■□□□ 1.63
LINC00543-201ENST00000567234 MCM3P25205 808 aa25.25■■□□□ 1.63
LINC00543-201ENST00000567234 CNGA1P29973 690 aa25.25■■□□□ 1.63
LINC00543-201ENST00000567234 PTK2Q05397 1052 aa25.25■■□□□ 1.63
LINC00543-201ENST00000567234 SNAPC2Q13487 334 aa25.25■■□□□ 1.63
LINC00543-201ENST00000567234 TXNRD2Q9NNW7 524 aa25.25■■□□□ 1.63
LINC00543-201ENST00000567234 APEX2Q9UBZ4 518 aa25.25■■□□□ 1.63
LINC00543-201ENST00000567234 A0A087X0T9 212 aa25.24■■□□□ 1.63
LINC00543-201ENST00000567234 H3BQF6 201 aa25.24■■□□□ 1.63
LINC00543-201ENST00000567234 FAM228BP0C875 321 aa25.24■■□□□ 1.63
LINC00543-201ENST00000567234 TTC31Q49AM3 519 aaPredicted RBP25.24■■□□□ 1.63
LINC00543-201ENST00000567234 BRDTQ58F21 947 aaPredicted RBP25.24■■□□□ 1.63
LINC00543-201ENST00000567234 VPS36Q86VN1 386 aa25.24■■□□□ 1.63
LINC00543-201ENST00000567234 SHCBP1Q8NEM2 672 aa25.24■■□□□ 1.63
LINC00543-201ENST00000567234 AFAP1L1Q8TED9 768 aa25.24■■□□□ 1.63
LINC00543-201ENST00000567234 DHX33Q9H6R0 707 aaKnown RBP25.24■■□□□ 1.63
LINC00543-201ENST00000567234 ARHGAP28Q9P2N2 729 aa25.24■■□□□ 1.63
LINC00543-201ENST00000567234 ADAMTS1Q9UHI8 967 aa25.24■■□□□ 1.63
LINC00543-201ENST00000567234 USP20Q9Y2K6 914 aa25.24■■□□□ 1.63
LINC00543-201ENST00000567234 PPME1Q9Y570 386 aa25.24■■□□□ 1.63
LINC00543-201ENST00000567234 BTNL10A8MVZ5 291 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 CCDC172P0C7W6 258 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 PRLRP16471 622 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 HUNKP57058 714 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 MTERF2Q49AM1 385 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 HSP90B2PQ58FF3 399 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 METTL7BQ6UX53 244 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 ZNF571Q7Z3V5 609 aaPredicted RBP25.23■■□□□ 1.63
LINC00543-201ENST00000567234 LMO3Q8TAP4 145 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 NOX5Q96PH1 765 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.23■■□□□ 1.63
LINC00543-201ENST00000567234 AJAP1Q9UKB5 411 aaPredicted RBP25.23■■□□□ 1.63
LINC00543-201ENST00000567234 PASKQ96RG2 1323 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 GSTTP1A0A1W2PQM5 241 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 CTAGE15A4D2H0 777 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 CTAGE8P0CG41 777 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 ADSSP30520 456 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 SOX5P35711 763 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 POLGP54098 1239 aaPredicted RBP25.23■■□□□ 1.63
LINC00543-201ENST00000567234 CORO7P57737 925 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 KCTD2Q14681 263 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 EMC2Q15006 297 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 NAB2Q15742 525 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 FAM160B1Q5W0V3 765 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 CTAGE6Q86UF2 777 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 GPIHBP1Q8IV16 184 aa25.23■■□□□ 1.63
LINC00543-201ENST00000567234 CTAGE4Q8IX94 777 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms