RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 RAB27AP51159 221 aa17.37■□□□□ 0.37
PALB2-205ENST00000567003 NPEPPSP55786 919 aa17.37■□□□□ 0.37
PALB2-205ENST00000567003 BLOC1S2Q6QNY1 142 aa17.37■□□□□ 0.37
PALB2-205ENST00000567003 TAS1R1Q7RTX1 841 aa17.37■□□□□ 0.37
PALB2-205ENST00000567003 PPFIBP1Q86W92 1011 aa17.37■□□□□ 0.37
PALB2-205ENST00000567003 CCDC105Q8IYK2 499 aa17.37■□□□□ 0.37
PALB2-205ENST00000567003 RDM1Q8NG50 284 aa17.37■□□□□ 0.37
PALB2-205ENST00000567003 ETNPPLQ8TBG4 499 aa17.37■□□□□ 0.37
PALB2-205ENST00000567003 URGCPQ8TCY9 931 aa17.37■□□□□ 0.37
PALB2-205ENST00000567003 EMILIN2Q9BXX0 1053 aa17.37■□□□□ 0.37
PALB2-205ENST00000567003 MINDY3Q9H8M7 445 aa17.37■□□□□ 0.37
PALB2-205ENST00000567003 IFT122Q9HBG6 1241 aa17.37■□□□□ 0.37
PALB2-205ENST00000567003 MAN1C1Q9NR34 630 aa17.37■□□□□ 0.37
PALB2-205ENST00000567003 AGPAT5Q9NUQ2 364 aa17.37■□□□□ 0.37
PALB2-205ENST00000567003 PRG3Q9Y2Y8 225 aaPredicted RBP17.37■□□□□ 0.37
PALB2-205ENST00000567003 F8W810 466 aa17.36■□□□□ 0.37
PALB2-205ENST00000567003 IFNAR1P17181 557 aa17.36■□□□□ 0.37
PALB2-205ENST00000567003 RPS6KB1P23443 525 aa17.36■□□□□ 0.37
PALB2-205ENST00000567003 CDC42EP1Q00587 391 aa17.36■□□□□ 0.37
PALB2-205ENST00000567003 ANGPT1Q15389 498 aa17.36■□□□□ 0.37
PALB2-205ENST00000567003 LETM2Q2VYF4 491 aa17.36■□□□□ 0.37
PALB2-205ENST00000567003 UBXN11Q5T124 520 aa17.36■□□□□ 0.37
PALB2-205ENST00000567003 DTWD2Q8NBA8 298 aa17.36■□□□□ 0.37
PALB2-205ENST00000567003 KCNB2Q92953 911 aa17.36■□□□□ 0.37
PALB2-205ENST00000567003 TMEM143Q96AN5 459 aa17.36■□□□□ 0.37
PALB2-205ENST00000567003 PGBD4Q96DM1 585 aa17.36■□□□□ 0.37
PALB2-205ENST00000567003 INO80BQ9C086 356 aaPredicted RBP17.36■□□□□ 0.37
PALB2-205ENST00000567003 RSAD1Q9HA92 442 aa17.36■□□□□ 0.37
PALB2-205ENST00000567003 MARCH5Q9NX47 278 aa17.36■□□□□ 0.37
PALB2-205ENST00000567003 FAN1Q9Y2M0 1017 aa17.36■□□□□ 0.37
PALB2-205ENST00000567003 COL4A3BPQ9Y5P4 624 aa17.36■□□□□ 0.37
PALB2-205ENST00000567003 DOCK8Q8NF50 2099 aa17.36■□□□□ 0.37
PALB2-205ENST00000567003 CACNA1AO00555 2505 aa17.36■□□□□ 0.37
PALB2-205ENST00000567003 DNAH14Q0VDD8 3507 aa17.35■□□□□ 0.37
PALB2-205ENST00000567003 NRP1O14786 923 aa17.35■□□□□ 0.37
PALB2-205ENST00000567003 SLC37A4O43826 429 aa17.35■□□□□ 0.37
PALB2-205ENST00000567003 CFHP08603 1231 aa17.35■□□□□ 0.37
PALB2-205ENST00000567003 SRGAP2CP0DJJ0 459 aa17.35■□□□□ 0.37
PALB2-205ENST00000567003 PDIA3P30101 505 aaKnown RBP17.35■□□□□ 0.37
PALB2-205ENST00000567003 AK2P54819 239 aa17.35■□□□□ 0.37
PALB2-205ENST00000567003 AIFM3Q96NN9 605 aa17.35■□□□□ 0.37
PALB2-205ENST00000567003 FAM193BQ96PV7 902 aaPredicted RBP17.35■□□□□ 0.37
PALB2-205ENST00000567003 MRPL17Q9NRX2 175 aaKnown RBP17.35■□□□□ 0.37
PALB2-205ENST00000567003 WRAP73Q9P2S5 460 aaPredicted RBP17.35■□□□□ 0.37
PALB2-205ENST00000567003 PCDHA4Q9UN74 947 aa17.35■□□□□ 0.37
PALB2-205ENST00000567003 CYP3A7-CYP3A51PA0A087WV96 503 aa17.34■□□□□ 0.37
PALB2-205ENST00000567003 RFPL2O75678 378 aa17.34■□□□□ 0.37
PALB2-205ENST00000567003 CYP3A7P24462 503 aa17.34■□□□□ 0.37
PALB2-205ENST00000567003 HOXA11P31270 313 aaPredicted RBP17.34■□□□□ 0.37
PALB2-205ENST00000567003 GBP2P32456 591 aaPredicted RBP17.34■□□□□ 0.37
PALB2-205ENST00000567003 PSMC5P62195 406 aa17.34■□□□□ 0.37
PALB2-205ENST00000567003 MRPL10Q7Z7H8 261 aaKnown RBP17.34■□□□□ 0.37
PALB2-205ENST00000567003 ST13P5Q8NFI4 369 aaPredicted RBP17.34■□□□□ 0.37
PALB2-205ENST00000567003 PRPF31Q8WWY3 499 aaKnown RBP17.34■□□□□ 0.37
PALB2-205ENST00000567003 RSPH1Q8WYR4 309 aa17.34■□□□□ 0.37
PALB2-205ENST00000567003 MBOAT7Q96N66 472 aa17.34■□□□□ 0.37
PALB2-205ENST00000567003 MYADMQ96S97 322 aa17.34■□□□□ 0.37
PALB2-205ENST00000567003 HERC2P3Q9BVR0 1158 aa17.34■□□□□ 0.37
PALB2-205ENST00000567003 CA14Q9ULX7 337 aa17.34■□□□□ 0.37
PALB2-205ENST00000567003 ARID2Q68CP9 1835 aa17.33■□□□□ 0.37
PALB2-205ENST00000567003 KRBA1A5PL33 1030 aa17.33■□□□□ 0.36
PALB2-205ENST00000567003 CARNS1A5YM72 827 aa17.33■□□□□ 0.36
PALB2-205ENST00000567003 M0R2N6 131 aa17.33■□□□□ 0.36
PALB2-205ENST00000567003 STK25O00506 426 aa17.33■□□□□ 0.36
PALB2-205ENST00000567003 INPPL1O15357 1258 aa17.33■□□□□ 0.36
PALB2-205ENST00000567003 TEX28O15482 410 aa17.33■□□□□ 0.36
PALB2-205ENST00000567003 SOD2P04179 222 aa17.33■□□□□ 0.36
PALB2-205ENST00000567003 ALDH2P05091 517 aa17.33■□□□□ 0.36
PALB2-205ENST00000567003 URODP06132 367 aa17.33■□□□□ 0.36
PALB2-205ENST00000567003 SPATA31D3P0C874 917 aa17.33■□□□□ 0.36
PALB2-205ENST00000567003 NPY5RQ15761 445 aa17.33■□□□□ 0.36
PALB2-205ENST00000567003 INF2Q27J81 1249 aa17.33■□□□□ 0.36
PALB2-205ENST00000567003 SPATA31D4Q6ZUB0 917 aa17.33■□□□□ 0.36
PALB2-205ENST00000567003 BLIDQ8IZY5 108 aa17.33■□□□□ 0.36
PALB2-205ENST00000567003 SMG8Q8ND04 991 aaKnown RBP17.33■□□□□ 0.36
PALB2-205ENST00000567003 B3GALT6Q96L58 329 aa17.33■□□□□ 0.36
PALB2-205ENST00000567003 RPS6KC1Q96S38 1066 aa17.33■□□□□ 0.36
PALB2-205ENST00000567003 LARP6Q9BRS8 491 aaKnown RBP17.33■□□□□ 0.36
PALB2-205ENST00000567003 TMEM175Q9BSA9 504 aa17.33■□□□□ 0.36
PALB2-205ENST00000567003 AGXT2Q9BYV1 514 aa17.33■□□□□ 0.36
PALB2-205ENST00000567003 SH3GLB2Q9NR46 395 aa17.33■□□□□ 0.36
PALB2-205ENST00000567003 DDX25Q9UHL0 483 aaKnown RBP17.33■□□□□ 0.36
PALB2-205ENST00000567003 VAV3Q9UKW4 847 aa17.33■□□□□ 0.36
PALB2-205ENST00000567003 CLUHO75153 1309 aa17.32■□□□□ 0.36
PALB2-205ENST00000567003 CCDC195A0A1B0GUA6 201 aa17.32■□□□□ 0.36
PALB2-205ENST00000567003 HSPA4P34932 840 aa17.32■□□□□ 0.36
PALB2-205ENST00000567003 OR1G1P47890 313 aa17.32■□□□□ 0.36
PALB2-205ENST00000567003 ID4P47928 161 aa17.32■□□□□ 0.36
PALB2-205ENST00000567003 FOXK2Q01167 660 aa17.32■□□□□ 0.36
PALB2-205ENST00000567003 LAMTOR4Q0VGL1 99 aa17.32■□□□□ 0.36
PALB2-205ENST00000567003 C15orf39Q6ZRI6 1047 aa17.32■□□□□ 0.36
PALB2-205ENST00000567003 CMASQ8NFW8 434 aaPredicted RBP17.32■□□□□ 0.36
PALB2-205ENST00000567003 RIN2Q8WYP3 895 aaPredicted RBP17.32■□□□□ 0.36
PALB2-205ENST00000567003 CEP170P1Q96L14 293 aa17.32■□□□□ 0.36
PALB2-205ENST00000567003 RTP3Q9BQQ7 232 aa17.32■□□□□ 0.36
PALB2-205ENST00000567003 EIF2AQ9BY44 585 aaKnown RBP17.32■□□□□ 0.36
PALB2-205ENST00000567003 MIOSQ9NXC5 875 aa17.32■□□□□ 0.36
PALB2-205ENST00000567003 HES2Q9Y543 173 aa17.32■□□□□ 0.36
PALB2-205ENST00000567003 R4GN57 208 aa17.32■□□□□ 0.36
PALB2-205ENST00000567003 DOCK6Q96HP0 2047 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms