RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 CALML4Q96GE6 196 aa21.96■■□□□ 1.11
CMTM3-211ENST00000565922 DRC1Q96MC2 740 aa21.96■■□□□ 1.11
CMTM3-211ENST00000565922 ASB2Q96Q27 587 aa21.96■■□□□ 1.11
CMTM3-211ENST00000565922 CSRNP2Q9H175 543 aa21.96■■□□□ 1.11
CMTM3-211ENST00000565922 RSAD1Q9HA92 442 aa21.96■■□□□ 1.11
CMTM3-211ENST00000565922 MYO7AQ13402 2215 aa21.95■■□□□ 1.1
CMTM3-211ENST00000565922 REV3LO60673 3130 aa21.95■■□□□ 1.1
CMTM3-211ENST00000565922 FGF18O76093 207 aa21.95■■□□□ 1.1
CMTM3-211ENST00000565922 ARF4P18085 180 aaPredicted RBP21.95■■□□□ 1.1
CMTM3-211ENST00000565922 NCLP19338 710 aaKnown RBP21.95■■□□□ 1.1
CMTM3-211ENST00000565922 EFNA5P52803 228 aa21.95■■□□□ 1.1
CMTM3-211ENST00000565922 MAPK6Q16659 721 aa21.95■■□□□ 1.1
CMTM3-211ENST00000565922 AMHR2Q16671 573 aa21.95■■□□□ 1.1
CMTM3-211ENST00000565922 NOMO2Q5JPE7 1267 aa21.95■■□□□ 1.1
CMTM3-211ENST00000565922 KCNT2Q6UVM3 1135 aa21.95■■□□□ 1.1
CMTM3-211ENST00000565922 LPPQ93052 612 aa21.95■■□□□ 1.1
CMTM3-211ENST00000565922 C17orf75Q9HAS0 396 aa21.95■■□□□ 1.1
CMTM3-211ENST00000565922 KCND2Q9NZV8 630 aa21.95■■□□□ 1.1
CMTM3-211ENST00000565922 KANSL3Q9P2N6 904 aa21.95■■□□□ 1.1
CMTM3-211ENST00000565922 PUF60Q9UHX1 559 aaKnown RBP21.95■■□□□ 1.1
CMTM3-211ENST00000565922 KCNG1Q9UIX4 513 aa21.95■■□□□ 1.1
CMTM3-211ENST00000565922 MTMR6Q9Y217 621 aa21.95■■□□□ 1.1
CMTM3-211ENST00000565922 LZTS1Q9Y250 596 aa21.95■■□□□ 1.1
CMTM3-211ENST00000565922 PHLPP2Q6ZVD8 1323 aa21.95■■□□□ 1.1
CMTM3-211ENST00000565922 BRWD1Q9NSI6 2320 aa21.94■■□□□ 1.1
CMTM3-211ENST00000565922 ALDH7A1P49419 539 aaKnown RBP21.94■■□□□ 1.1
CMTM3-211ENST00000565922 PLCB3Q01970 1234 aa21.94■■□□□ 1.1
CMTM3-211ENST00000565922 KRT17Q04695 432 aa21.94■■□□□ 1.1
CMTM3-211ENST00000565922 RNASELQ05823 741 aaKnown RBP21.94■■□□□ 1.1
CMTM3-211ENST00000565922 TCEAL5Q5H9L2 206 aa21.94■■□□□ 1.1
CMTM3-211ENST00000565922 UBXN11Q5T124 520 aa21.94■■□□□ 1.1
CMTM3-211ENST00000565922 PDE12Q6L8Q7 609 aaKnown RBP21.94■■□□□ 1.1
CMTM3-211ENST00000565922 SLC27A1Q6PCB7 646 aa21.94■■□□□ 1.1
CMTM3-211ENST00000565922 LRRC55Q6ZSA7 311 aa21.94■■□□□ 1.1
CMTM3-211ENST00000565922 CPB2Q96IY4 423 aa21.94■■□□□ 1.1
CMTM3-211ENST00000565922 FZD8Q9H461 694 aa21.94■■□□□ 1.1
CMTM3-211ENST00000565922 HCSTQ9UBK5 93 aa21.94■■□□□ 1.1
CMTM3-211ENST00000565922 OFD1O75665 1012 aa21.93■■□□□ 1.1
CMTM3-211ENST00000565922 ITGA4P13612 1032 aa21.93■■□□□ 1.1
CMTM3-211ENST00000565922 DMP1Q13316 513 aaPredicted RBP21.93■■□□□ 1.1
CMTM3-211ENST00000565922 TMEM132AQ24JP5 1023 aa21.93■■□□□ 1.1
CMTM3-211ENST00000565922 RINT1Q6NUQ1 792 aa21.93■■□□□ 1.1
CMTM3-211ENST00000565922 AGMOQ6ZNB7 445 aa21.93■■□□□ 1.1
CMTM3-211ENST00000565922 RASSF8Q8NHQ8 419 aa21.93■■□□□ 1.1
CMTM3-211ENST00000565922 BSNDQ8WZ55 320 aa21.93■■□□□ 1.1
CMTM3-211ENST00000565922 UBE2ZQ9H832 354 aaPredicted RBP21.93■■□□□ 1.1
CMTM3-211ENST00000565922 TLR9Q9NR96 1032 aa21.93■■□□□ 1.1
CMTM3-211ENST00000565922 SPG21Q9NZD8 308 aa21.93■■□□□ 1.1
CMTM3-211ENST00000565922 INPP5FQ9Y2H2 1132 aa21.93■■□□□ 1.1
CMTM3-211ENST00000565922 IPPQ9Y573 584 aa21.93■■□□□ 1.1
CMTM3-211ENST00000565922 TCF20Q9UGU0 1960 aaKnown RBP21.92■■□□□ 1.1
CMTM3-211ENST00000565922 ZMYM2Q9UBW7 1377 aa21.92■■□□□ 1.1
CMTM3-211ENST00000565922 A0A1B0GUA9 196 aa21.92■■□□□ 1.1
CMTM3-211ENST00000565922 FSD2A1L4K1 749 aa21.92■■□□□ 1.1
CMTM3-211ENST00000565922 DLL1O00548 723 aa21.92■■□□□ 1.1
CMTM3-211ENST00000565922 N4BP3O15049 544 aa21.92■■□□□ 1.1
CMTM3-211ENST00000565922 SSBP05455 408 aaKnown RBP eCLIP21.92■■□□□ 1.1
CMTM3-211ENST00000565922 PRKCBP05771 671 aa21.92■■□□□ 1.1
CMTM3-211ENST00000565922 GUCY2CP25092 1073 aa21.92■■□□□ 1.1
CMTM3-211ENST00000565922 PRPF4BQ13523 1007 aaKnown RBP21.92■■□□□ 1.1
CMTM3-211ENST00000565922 LONRF3Q496Y0 759 aa21.92■■□□□ 1.1
CMTM3-211ENST00000565922 TMEM119Q4V9L6 283 aa21.92■■□□□ 1.1
CMTM3-211ENST00000565922 SYT2Q8N9I0 419 aaPredicted RBP21.92■■□□□ 1.1
CMTM3-211ENST00000565922 MRPS27Q92552 414 aaKnown RBP21.92■■□□□ 1.1
CMTM3-211ENST00000565922 PABPC5Q96DU9 382 aaKnown RBP21.92■■□□□ 1.1
CMTM3-211ENST00000565922 PNMA5Q96PV4 448 aa21.92■■□□□ 1.1
CMTM3-211ENST00000565922 ADPGKQ9BRR6 497 aa21.92■■□□□ 1.1
CMTM3-211ENST00000565922 TBC1D13Q9NVG8 400 aa21.92■■□□□ 1.1
CMTM3-211ENST00000565922 MEIS3P2A8K0S8 358 aa21.91■■□□□ 1.1
CMTM3-211ENST00000565922 ACKR2O00590 384 aa21.91■■□□□ 1.1
CMTM3-211ENST00000565922 B4GALT5O43286 388 aa21.91■■□□□ 1.1
CMTM3-211ENST00000565922 HIP1RO75146 1068 aa21.91■■□□□ 1.1
CMTM3-211ENST00000565922 ZC3H11AO75152 810 aaKnown RBP eCLIP21.91■■□□□ 1.1
CMTM3-211ENST00000565922 TFF2Q03403 129 aa21.91■■□□□ 1.1
CMTM3-211ENST00000565922 CAMK1Q14012 370 aa21.91■■□□□ 1.1
CMTM3-211ENST00000565922 C1orf186Q6ZWK4 172 aa21.91■■□□□ 1.1
CMTM3-211ENST00000565922 KCNK18Q7Z418 384 aa21.91■■□□□ 1.1
CMTM3-211ENST00000565922 SMG8Q8ND04 991 aaKnown RBP21.91■■□□□ 1.1
CMTM3-211ENST00000565922 MICAL1Q8TDZ2 1067 aa21.91■■□□□ 1.1
CMTM3-211ENST00000565922 TMEM169Q96HH4 297 aa21.91■■□□□ 1.1
CMTM3-211ENST00000565922 FAM193BQ96PV7 902 aaPredicted RBP21.91■■□□□ 1.1
CMTM3-211ENST00000565922 RUSC1Q9BVN2 902 aa21.91■■□□□ 1.1
CMTM3-211ENST00000565922 EIF2AQ9BY44 585 aaKnown RBP21.91■■□□□ 1.1
CMTM3-211ENST00000565922 GIT1Q9Y2X7 761 aa21.91■■□□□ 1.1
CMTM3-211ENST00000565922 CLIC4Q9Y696 253 aa21.91■■□□□ 1.1
CMTM3-211ENST00000565922 MORC2Q9Y6X9 1032 aaPredicted RBP21.91■■□□□ 1.1
CMTM3-211ENST00000565922 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.9■■□□□ 1.1
CMTM3-211ENST00000565922 CCDC169A6NNP5 214 aa21.9■■□□□ 1.1
CMTM3-211ENST00000565922 CSPG5O95196 566 aa21.9■■□□□ 1.1
CMTM3-211ENST00000565922 PLA2G4BP0C869 781 aa21.9■■□□□ 1.1
CMTM3-211ENST00000565922 DNAJB1P25685 340 aa21.9■■□□□ 1.1
CMTM3-211ENST00000565922 TXLNAP40222 546 aa21.9■■□□□ 1.1
CMTM3-211ENST00000565922 BCAR1P56945 870 aa21.9■■□□□ 1.1
CMTM3-211ENST00000565922 BMS1Q14692 1282 aaKnown RBP21.9■■□□□ 1.1
CMTM3-211ENST00000565922 PTPAQ15257 358 aa21.9■■□□□ 1.1
CMTM3-211ENST00000565922 APBB1IPQ7Z5R6 666 aaPredicted RBP21.9■■□□□ 1.1
CMTM3-211ENST00000565922 SLC39A11Q8N1S5 342 aa21.9■■□□□ 1.1
CMTM3-211ENST00000565922 PLIN2Q99541 437 aa21.9■■□□□ 1.1
CMTM3-211ENST00000565922 COL25A1Q9BXS0 654 aaPredicted RBP21.9■■□□□ 1.1
CMTM3-211ENST00000565922 CCSER1Q9C0I3 900 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms