RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 RASSF1Q9NS23 344 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 C14orf119Q9NWQ9 140 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 RNF181Q9P0P0 153 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 ATP6V0A2Q9Y487 856 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 JRKLQ9Y4A0 524 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 COL4A5P29400 1685 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 DNAJC25-GNG10A0A024R161 153 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 A0A1W2PRU2 124 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 SYCE3A1L190 88 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 SGK1O00141 431 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 POLR3GO15318 223 aaPredicted RBP3.36□□□□□ -1.87
CHD9-216ENST00000565803 KERAO60938 352 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 PHACTR2O75167 634 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 MTRF1O75570 445 aaKnown RBP3.36□□□□□ -1.87
CHD9-216ENST00000565803 RHCEP18577 417 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 FGFR4P22455 802 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 LIMK1P53667 647 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 CACNB3P54284 484 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 CSE1LP55060 971 aaKnown RBP3.36□□□□□ -1.87
CHD9-216ENST00000565803 KRT83P78385 493 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 RHDQ02161 417 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 EIF4A2Q14240 407 aaKnown RBP3.36□□□□□ -1.87
CHD9-216ENST00000565803 DLGAP5Q15398 846 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 PGBD2Q6P3X8 592 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 LRSAM1Q6UWE0 723 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 DTHD1Q6ZMT9 781 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 LIAT1Q6ZQX7 453 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 LRRC47Q8N1G4 583 aaKnown RBP3.36□□□□□ -1.87
CHD9-216ENST00000565803 ZBTB38Q8NAP3 1195 aaPredicted RBP3.36□□□□□ -1.87
CHD9-216ENST00000565803 ZNF511Q8NB15 262 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 KCTD13Q8WZ19 329 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 MUL1Q969V5 352 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 EXOC4Q96A65 974 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 KIFC2Q96AC6 838 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 ZBTB9Q96C00 473 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 TCEANC2Q96MN5 208 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 CLUHP3Q96NS8 147 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 NOL10Q9BSC4 688 aaKnown RBP3.36□□□□□ -1.87
CHD9-216ENST00000565803 DDX23Q9BUQ8 820 aaKnown RBP3.36□□□□□ -1.87
CHD9-216ENST00000565803 LMAN2LQ9H0V9 348 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 TRIT1Q9H3H1 467 aaKnown RBP3.36□□□□□ -1.87
CHD9-216ENST00000565803 TMEM165Q9HC07 324 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 ZNF277Q9NRM2 450 aaPredicted RBP3.36□□□□□ -1.87
CHD9-216ENST00000565803 CHMP5Q9NZZ3 219 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 LAMP5Q9UJQ1 280 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 ZNF215Q9UL58 517 aaPredicted RBP3.36□□□□□ -1.87
CHD9-216ENST00000565803 USP20Q9Y2K6 914 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 MSRB2Q9Y3D2 182 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 ITIH6Q6UXX5 1313 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 CENPJQ9HC77 1338 aaPredicted RBP3.36□□□□□ -1.87
CHD9-216ENST00000565803 CCDC196A0A1B0GTZ2 297 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 GDF9O60383 454 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 DOK2O60496 412 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 SMC2O95347 1197 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 PDGFAP04085 211 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 SKILP12757 684 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 GAP43P17677 238 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 RPS6KB1P23443 525 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 TNFSF4P23510 183 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 GDI1P31150 447 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 PPM1AP35813 382 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 MSH2P43246 934 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 GTF2A1P52655 376 aaPredicted RBP3.36□□□□□ -1.87
CHD9-216ENST00000565803 SH3BP2P78314 561 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 NOGQ13253 232 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 CAMK2GQ13555 558 aaPredicted RBP3.36□□□□□ -1.87
CHD9-216ENST00000565803 MBTPS1Q14703 1052 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 COG2Q14746 738 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 ODF1Q14990 250 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 PLCL1Q15111 1095 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 ZNF674Q2M3X9 581 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 CTC1Q2NKJ3 1217 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 CWF19L2Q2TBE0 894 aaKnown RBP3.36□□□□□ -1.87
CHD9-216ENST00000565803 FAM209BQ5JX69 171 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 INTS11Q5TA45 600 aaKnown RBP3.36□□□□□ -1.87
CHD9-216ENST00000565803 KIAA0319Q5VV43 1072 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 FOXB2Q5VYV0 432 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 SLC30A9Q6PML9 568 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 ZER1Q7Z7L7 766 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 CPA6Q8N4T0 437 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 SHC3Q92529 594 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 TMEM237Q96Q45 408 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 HAUS7Q99871 368 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 CAPS2Q9BXY5 557 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 PACSIN1Q9BY11 444 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 VPS33BQ9H267 617 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 SYNCQ9H7C4 482 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 XAB2Q9HCS7 855 aaKnown RBP3.36□□□□□ -1.87
CHD9-216ENST00000565803 C11orf16Q9NQ32 467 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 DDX18Q9NVP1 670 aaKnown RBP3.36□□□□□ -1.87
CHD9-216ENST00000565803 PDP2Q9P2J9 529 aa3.36□□□□□ -1.87
CHD9-216ENST00000565803 SLX4Q8IY92 1834 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 ACEP12821 1306 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 ARHGAP10A1A4S6 786 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 INO80B-WBP1J3KQ70 363 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 UBXN8O00124 270 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 NFKBIEO00221 500 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 WNT7AO00755 349 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 MAN1A2O60476 641 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 MAFKO60675 156 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms