RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 RBM10P98175 930 aaKnown RBP22.11■■□□□ 1.13
CLN6-206ENST00000565471 BMS1Q14692 1282 aaKnown RBP22.11■■□□□ 1.13
CLN6-206ENST00000565471 MRPL43Q8N983 215 aaKnown RBP22.11■■□□□ 1.13
CLN6-206ENST00000565471 FAM184AQ8NB25 1140 aa22.11■■□□□ 1.13
CLN6-206ENST00000565471 CNNM3Q8NE01 707 aa22.11■■□□□ 1.13
CLN6-206ENST00000565471 URGCPQ8TCY9 931 aa22.11■■□□□ 1.13
CLN6-206ENST00000565471 CCDC51Q96ER9 411 aa22.11■■□□□ 1.13
CLN6-206ENST00000565471 NFKBIZQ9BYH8 718 aa22.11■■□□□ 1.13
CLN6-206ENST00000565471 RSAD1Q9HA92 442 aa22.11■■□□□ 1.13
CLN6-206ENST00000565471 TSPAN1O60635 241 aa22.1■■□□□ 1.13
CLN6-206ENST00000565471 GALTP07902 379 aa22.1■■□□□ 1.13
CLN6-206ENST00000565471 OR52Z1P0C646 297 aa22.1■■□□□ 1.13
CLN6-206ENST00000565471 NCLP19338 710 aaKnown RBP22.1■■□□□ 1.13
CLN6-206ENST00000565471 TRAPPC10P48553 1259 aa22.1■■□□□ 1.13
CLN6-206ENST00000565471 RNASELQ05823 741 aaKnown RBP22.1■■□□□ 1.13
CLN6-206ENST00000565471 CAPSQ13938 189 aa22.1■■□□□ 1.13
CLN6-206ENST00000565471 ASAP3Q8TDY4 903 aa22.1■■□□□ 1.13
CLN6-206ENST00000565471 PIGOQ8TEQ8 1089 aa22.1■■□□□ 1.13
CLN6-206ENST00000565471 IGSF21Q96ID5 467 aa22.1■■□□□ 1.13
CLN6-206ENST00000565471 POLR3CQ9BUI4 534 aaPredicted RBP22.1■■□□□ 1.13
CLN6-206ENST00000565471 KANSL3Q9P2N6 904 aa22.1■■□□□ 1.13
CLN6-206ENST00000565471 FAM86C2PA6NEL3 165 aa22.09■■□□□ 1.13
CLN6-206ENST00000565471 C2orf71A6NGG8 1288 aa22.09■■□□□ 1.13
CLN6-206ENST00000565471 INO80B-WBP1J3KQ70 363 aa22.09■■□□□ 1.13
CLN6-206ENST00000565471 GLRA2P23416 452 aa22.09■■□□□ 1.13
CLN6-206ENST00000565471 MBTD1Q05BQ5 628 aa22.09■■□□□ 1.13
CLN6-206ENST00000565471 NCBP1Q09161 790 aaKnown RBP22.09■■□□□ 1.13
CLN6-206ENST00000565471 ANKRD54Q6NXT1 300 aa22.09■■□□□ 1.13
CLN6-206ENST00000565471 NOTUMQ6P988 496 aa22.09■■□□□ 1.13
CLN6-206ENST00000565471 DDX53Q86TM3 631 aaKnown RBP22.09■■□□□ 1.13
CLN6-206ENST00000565471 TMEM173Q86WV6 379 aaPredicted RBP22.09■■□□□ 1.13
CLN6-206ENST00000565471 CATSPER3Q86XQ3 398 aa22.09■■□□□ 1.13
CLN6-206ENST00000565471 NOSTRINQ8IVI9 506 aa22.09■■□□□ 1.13
CLN6-206ENST00000565471 ERMNQ8TAM6 284 aa22.09■■□□□ 1.13
CLN6-206ENST00000565471 SUSD6Q92537 303 aa22.09■■□□□ 1.13
CLN6-206ENST00000565471 ZBP1Q9H171 429 aa22.09■■□□□ 1.13
CLN6-206ENST00000565471 UBN1Q9NPG3 1134 aa22.09■■□□□ 1.13
CLN6-206ENST00000565471 RAPGEFL1Q9UHV5 662 aa22.09■■□□□ 1.13
CLN6-206ENST00000565471 DBR1Q9UK59 544 aaKnown RBP22.09■■□□□ 1.13
CLN6-206ENST00000565471 PRR33A8MZF0 331 aa22.08■■□□□ 1.13
CLN6-206ENST00000565471 MED24O75448 989 aa22.08■■□□□ 1.13
CLN6-206ENST00000565471 HOXB8P17481 243 aaPredicted RBP22.08■■□□□ 1.13
CLN6-206ENST00000565471 TECP42680 631 aa22.08■■□□□ 1.13
CLN6-206ENST00000565471 GIT2Q14161 759 aa22.08■■□□□ 1.13
CLN6-206ENST00000565471 ZNF174Q15697 407 aa22.08■■□□□ 1.13
CLN6-206ENST00000565471 TTC38Q5R3I4 469 aa22.08■■□□□ 1.13
CLN6-206ENST00000565471 VPS52Q8N1B4 723 aa22.08■■□□□ 1.13
CLN6-206ENST00000565471 SMG8Q8ND04 991 aaKnown RBP22.08■■□□□ 1.13
CLN6-206ENST00000565471 CASP10Q92851 521 aa22.08■■□□□ 1.13
CLN6-206ENST00000565471 NACC1Q96RE7 527 aa22.08■■□□□ 1.13
CLN6-206ENST00000565471 POLR3FQ9H1D9 316 aaPredicted RBP22.08■■□□□ 1.13
CLN6-206ENST00000565471 DNAJB4Q9UDY4 337 aa22.08■■□□□ 1.13
CLN6-206ENST00000565471 STK39Q9UEW8 545 aa22.08■■□□□ 1.13
CLN6-206ENST00000565471 IRAK3Q9Y616 596 aa22.08■■□□□ 1.13
CLN6-206ENST00000565471 LOC730098B7Z3J9 87 aa22.07■■□□□ 1.12
CLN6-206ENST00000565471 USO1O60763 962 aaKnown RBP22.07■■□□□ 1.12
CLN6-206ENST00000565471 RPA1P27694 616 aa22.07■■□□□ 1.12
CLN6-206ENST00000565471 SLC11A1P49279 550 aa22.07■■□□□ 1.12
CLN6-206ENST00000565471 GNL2Q13823 731 aaKnown RBP22.07■■□□□ 1.12
CLN6-206ENST00000565471 CBX2Q14781 532 aaPredicted RBP22.07■■□□□ 1.12
CLN6-206ENST00000565471 AMHR2Q16671 573 aa22.07■■□□□ 1.12
CLN6-206ENST00000565471 HERC4Q5GLZ8 1057 aaPredicted RBP22.07■■□□□ 1.12
CLN6-206ENST00000565471 SYCE2Q6PIF2 218 aa22.07■■□□□ 1.12
CLN6-206ENST00000565471 ZNF280BQ86YH2 543 aa22.07■■□□□ 1.12
CLN6-206ENST00000565471 RNF135Q8IUD6 432 aa22.07■■□□□ 1.12
CLN6-206ENST00000565471 MCPH1Q8NEM0 835 aa22.07■■□□□ 1.12
CLN6-206ENST00000565471 TMEM175Q9BSA9 504 aa22.07■■□□□ 1.12
CLN6-206ENST00000565471 PHF7Q9BWX1 381 aaPredicted RBP22.07■■□□□ 1.12
CLN6-206ENST00000565471 GBP3Q9H0R5 595 aa22.07■■□□□ 1.12
CLN6-206ENST00000565471 CSRNP2Q9H175 543 aa22.07■■□□□ 1.12
CLN6-206ENST00000565471 S1PR5Q9H228 398 aa22.07■■□□□ 1.12
CLN6-206ENST00000565471 NOL7Q9UMY1 257 aaKnown RBP22.07■■□□□ 1.12
CLN6-206ENST00000565471 IPPQ9Y573 584 aa22.07■■□□□ 1.12
CLN6-206ENST00000565471 A0A087WWV3 80 aa22.06■■□□□ 1.12
CLN6-206ENST00000565471 INPPL1O15357 1258 aa22.06■■□□□ 1.12
CLN6-206ENST00000565471 B4GALT3O60512 393 aa22.06■■□□□ 1.12
CLN6-206ENST00000565471 CXCL14O95715 111 aa22.06■■□□□ 1.12
CLN6-206ENST00000565471 CTSAP10619 480 aa22.06■■□□□ 1.12
CLN6-206ENST00000565471 ITGA4P13612 1032 aa22.06■■□□□ 1.12
CLN6-206ENST00000565471 MUTP22033 750 aa22.06■■□□□ 1.12
CLN6-206ENST00000565471 RABEP1Q15276 862 aa22.06■■□□□ 1.12
CLN6-206ENST00000565471 LLGL2Q6P1M3 1020 aa22.06■■□□□ 1.12
CLN6-206ENST00000565471 BCL7CQ8WUZ0 217 aaPredicted RBP22.06■■□□□ 1.12
CLN6-206ENST00000565471 FAM193BQ96PV7 902 aaPredicted RBP22.06■■□□□ 1.12
CLN6-206ENST00000565471 EIF2AQ9BY44 585 aaKnown RBP22.06■■□□□ 1.12
CLN6-206ENST00000565471 HCN4Q9Y3Q4 1203 aa22.06■■□□□ 1.12
CLN6-206ENST00000565471 ARIH1Q9Y4X5 557 aaPredicted RBP22.06■■□□□ 1.12
CLN6-206ENST00000565471 HCFC2Q9Y5Z7 792 aa22.06■■□□□ 1.12
CLN6-206ENST00000565471 CLASP2O75122 1294 aaKnown RBP22.05■■□□□ 1.12
CLN6-206ENST00000565471 DDHD2O94830 711 aa22.05■■□□□ 1.12
CLN6-206ENST00000565471 ARF4P18085 180 aaPredicted RBP22.05■■□□□ 1.12
CLN6-206ENST00000565471 U2AF2P26368 475 aaKnown RBP eCLIP22.05■■□□□ 1.12
CLN6-206ENST00000565471 AFF1P51825 1210 aaKnown RBP22.05■■□□□ 1.12
CLN6-206ENST00000565471 HAUS3Q68CZ6 603 aa22.05■■□□□ 1.12
CLN6-206ENST00000565471 CPB2Q96IY4 423 aa22.05■■□□□ 1.12
CLN6-206ENST00000565471 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.04■■□□□ 1.12
CLN6-206ENST00000565471 POMCP01189 267 aa22.04■■□□□ 1.12
CLN6-206ENST00000565471 ALDH2P05091 517 aa22.04■■□□□ 1.12
CLN6-206ENST00000565471 FXR2P51116 673 aaKnown RBP eCLIP22.04■■□□□ 1.12
CLN6-206ENST00000565471 TPRNQ4KMQ1 711 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms